Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F56 I0 R1
|
312 |
170.3 |
8276235 |
93.7% |
7754832 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,600,288 |
C→T |
100% |
S128L (TCG→TTG) |
gcvR → |
transcriptional repressor, regulatory protein accessory to GcvA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,600,288 | 0 | C | T | 98.8%
| 562.9
/ ‑2.8
| 170 | S128L (TCG→TTG) | gcvR | transcriptional repressor, regulatory protein accessory to GcvA |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (83/85); total (84/86) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.24e-01 |
Only 100 of 171 total aligned reads displayed.
TCTGGGTTCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTCGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTGAGC > NC_000913/2600192‑2600383
|
ctgGGTTCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTgcgc > 2:1915670/1‑100 (MQ=255)
ctgGGTTCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTgcgc < 2:2928956/100‑1 (MQ=255)
tgGGTTCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGcgca < 2:1816434/100‑1 (MQ=255)
tgGGTTCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGcgca < 1:277467/100‑1 (MQ=255)
gggTTCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGcgcac > 1:3337734/1‑100 (MQ=255)
ggTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAAcc < 1:3269837/99‑1 (MQ=255)
ggTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACCTTTCAACGCGCAGCATATGCACATTGCGGAGCTGGTGTTGCGCACGCGAcc > 2:792945/1‑99 (MQ=255)
gTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGTGCGCAAcacc < 2:603955/100‑4 (MQ=255)
gTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACctg > 1:790306/1‑100 (MQ=255)
gTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACctg < 2:2680477/100‑1 (MQ=255)
gTCGATGTGGCAGACTCCCCGCATTTAATTGAAAGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACct > 2:2475886/1‑99 (MQ=255)
tCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGTGCGCAAcacca < 2:1224325/100‑5 (MQ=255)
tCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGTGCGCAAcacca < 1:3872545/100‑5 (MQ=255)
tCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACctgc > 2:4008840/1‑100 (MQ=255)
cGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGTGCGCAAcaccag < 2:3326370/100‑6 (MQ=255)
cGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGTGCGCAAcacca < 1:3485769/99‑5 (MQ=255)
gATGTGGCAGACTCCCCGCATTTAATTGCACGCTTCACAGCAGTTTTCGACGCGCATCATATGAACATTGCGGGGCTGGTGTTGCGTGCGCAAcaccagc < 2:2032303/100‑7 (MQ=255)
gATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGTGCGCAAcaccagc < 1:1041320/100‑7 (MQ=255)
gATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGTGCGCAAcaccagc < 2:842002/100‑7 (MQ=255)
gATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGTGCGCAAcaccagc < 2:3528031/100‑7 (MQ=255)
gATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACctgctg > 1:1525440/1‑100 (MQ=255)
tgtgGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGaa < 2:3982201/100‑1 (MQ=255)
ggCCGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGaaaa > 2:229664/1‑99 (MQ=255)
ggCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAAt > 2:96750/1‑100 (MQ=255)
ggCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAAt > 1:2948961/1‑100 (MQ=255)
ggCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAAt < 2:2237379/100‑1 (MQ=255)
ggCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAAt > 2:2443166/1‑100 (MQ=255)
gCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGTGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATg < 1:345170/100‑1 (MQ=255)
gACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAAc < 1:2987818/100‑1 (MQ=255)
gACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAAc < 1:536784/100‑1 (MQ=255)
ccccGCATTTAATTGCACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCGGAAAATGAACGGGc < 2:763531/100‑1 (MQ=255)
ccccGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATAATATGAACATTGCGGAGCTGGTGTTGCGCACGCCCCGTGCTGAAAATGAACGAGc > 2:424496/1‑100 (MQ=255)
cccGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGTTGTTGCGCACGCAACCTGCTGAAAGTGAACGGGCt > 2:2435217/1‑100 (MQ=255)
cccGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCt > 1:2207244/1‑100 (MQ=255)
ccGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGATCGGGCTg < 1:2168601/100‑1 (MQ=255)
cGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTgc < 1:249886/100‑1 (MQ=255)
cGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTgc > 2:2103882/1‑100 (MQ=255)
cGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTgc < 1:2251599/100‑1 (MQ=255)
gCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTgcg > 1:273089/1‑100 (MQ=255)
aTTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAACCAGTGTTGCGCACGCAACGTGGTGAACAGGAGCGGGc > 2:3422866/1‑94 (MQ=255)
tttAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAg > 1:3510936/1‑100 (MQ=255)
tAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGtt > 1:3467562/1‑100 (MQ=255)
aaTTGAACGCTCCACAGCACTTTTCGACGCGCACCCTATGAACATTGCGGAGCTGGTGTTCCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTg < 2:1825400/100‑1 (MQ=255)
aTTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGc > 2:1525853/1‑100 (MQ=255)
aTTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGc > 2:3687961/1‑100 (MQ=255)
ttGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCa > 2:3397231/1‑100 (MQ=255)
tGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCat < 1:5871/100‑1 (MQ=255)
gAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCata > 1:1326597/1‑100 (MQ=255)
cGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTc < 1:565787/100‑1 (MQ=255)
cGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTCGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTc > 1:1456056/1‑100 (MQ=255)
gCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCa < 2:517401/100‑1 (MQ=255)
gCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCa < 1:3895786/100‑1 (MQ=255)
cacaGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATa > 2:3572787/1‑100 (MQ=255)
cacaGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATa > 2:284286/1‑100 (MQ=255)
acaGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATaa > 2:2626039/1‑100 (MQ=255)
caGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATa < 2:3079329/98‑1 (MQ=255)
caGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCAGCGCAGTTGCATATTCAGATAAc > 1:3575318/1‑100 (MQ=255)
gCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCg < 1:1042536/100‑1 (MQ=255)
gCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCg > 1:961097/1‑100 (MQ=255)
cACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGc > 1:982615/1‑100 (MQ=255)
cTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGccc < 2:3672732/100‑1 (MQ=255)
cTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGccc > 1:3671498/1‑100 (MQ=255)
cTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGAGCAGTTGCATATTCAGATAACCGcc > 1:32223/1‑99 (MQ=255)
cTTTTCGACGCGCATCAGATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGccc < 1:1339676/100‑1 (MQ=255)
cTTCTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGccc < 2:1072108/100‑1 (MQ=255)
ttttCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCca < 1:3777181/100‑1 (MQ=255)
tttCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCcac < 1:1840633/100‑1 (MQ=255)
cGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGc > 1:1713558/1‑100 (MQ=255)
gACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGcc > 1:3085232/1‑100 (MQ=255)
aCGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGccc < 2:122950/100‑1 (MQ=255)
gcgcATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCg < 2:2720185/100‑1 (MQ=255)
gcATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCa > 2:919963/1‑100 (MQ=255)
atcatATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATc < 1:618746/100‑1 (MQ=255)
tcatATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATc < 2:1417952/99‑1 (MQ=255)
tttGAACATTGCTGAGCTGGTGTTGCGCACGCATCCTGCTGAAAATGAACGGGCTGCGCAGTTTCATATTCAGATAACCGCCCACAGCCCCGCATCTGCg < 2:3645274/98‑1 (MQ=255)
tatGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCg < 1:2282583/100‑1 (MQ=255)
tatGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCAACAGCCCCGCATCTGCg < 2:3231954/100‑1 (MQ=255)
atGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCgg < 2:383687/100‑1 (MQ=255)
tGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGa > 2:871802/1‑100 (MQ=255)
tGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGa > 1:159838/1‑100 (MQ=255)
gAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGAc < 2:571700/100‑1 (MQ=255)
gAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGAc > 1:2018602/1‑100 (MQ=255)
gAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGAc < 1:3014538/100‑1 (MQ=255)
aaCATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACg > 2:2959466/1‑100 (MQ=255)
aCATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACgc > 1:500585/1‑100 (MQ=255)
aCATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACgc < 2:45646/100‑1 (MQ=255)
cATTGCGGAGCTGGTGTTGCGCACGCAACCTACTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACgca < 1:1059529/100‑1 (MQ=255)
gCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCaa > 1:1401586/1‑100 (MQ=255)
gCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCaa > 1:1691374/1‑100 (MQ=255)
cGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCaaa > 1:2376061/1‑100 (MQ=255)
ggAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCaaa < 2:1752901/99‑1 (MQ=255)
gCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATAtt > 1:2694761/1‑100 (MQ=255)
cTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCATAGCCCCGCATCTGCGGACGCAGCAAATATTg < 1:2103895/100‑1 (MQ=255)
cTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTg < 2:2326604/100‑1 (MQ=255)
tGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTGa < 1:3125198/100‑1 (MQ=255)
tGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTGa > 2:1721834/1‑100 (MQ=255)
ggTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCACATATTGa > 2:788411/1‑99 (MQ=255)
ggTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTGAg < 1:441107/100‑1 (MQ=255)
gtgtTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTGAGc < 1:3767906/100‑1 (MQ=255)
gtgtTGCGCACGCAACCTGCTGAAAATGAACGGGATGCGCAGTTGCATATTCAAATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTGa < 2:3964754/98‑1 (MQ=255)
|
TCTGGGTTCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTCGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTGAGC > NC_000913/2600192‑2600383
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
