Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F56 I0 R1
|
312 |
170.3 |
8276235 |
93.7% |
7754832 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
2,810,758 |
G→A |
18.4% |
intergenic (+79/‑12) |
ygaH → / → mprA |
putative L‑valine exporter, norvaline resistance protein/transcriptional repressor of microcin B17 synthesis and multidrug efflux |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,810,758 | 0 | G | A | 18.4%
| 358.6
/ 65.1
| 167 | intergenic (+79/‑12) | ygaH/mprA | putative L‑valine exporter, norvaline resistance protein/transcriptional repressor of microcin B17 synthesis and multidrug efflux |
| Reads supporting (aligned to +/- strand): ref base G (73/63); new base A (16/15); total (89/78) |
| Fisher's exact test for biased strand distribution p-value = 8.45e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.31e-01 |
Only 100 of 172 total aligned reads displayed.
AAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCTTCTGA > NC_000913/2810659‑2810857
|
aaaGTGATGGCGATTATATAACCCACACGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTCCTATATCGGCTGAAATTAATAAg < 2:3922035/100‑1 (MQ=255)
aaGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAgg > 2:594593/1‑100 (MQ=255)
aaGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAgg < 1:1036309/100‑1 (MQ=255)
aaGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAgg < 1:3821764/100‑1 (MQ=255)
aGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGt < 2:1005467/100‑1 (MQ=255)
aGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGt < 1:3570747/100‑1 (MQ=255)
gTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGAGGT‑c < 2:1393335/100‑1 (MQ=255)
gTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑c > 1:1047279/1‑100 (MQ=255)
gTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑c > 1:1734242/1‑100 (MQ=255)
gTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAAGT‑c < 1:3622203/100‑1 (MQ=255)
tGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑Ca > 2:1579664/1‑100 (MQ=255)
gATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CAt > 2:2841378/1‑100 (MQ=255)
gATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAAGT‑CAt > 2:1827723/1‑100 (MQ=255)
aTGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATa < 2:2022255/100‑1 (MQ=255)
ggCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATAcc < 1:2853958/100‑1 (MQ=255)
gCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATAccc > 2:1758751/1‑100 (MQ=255)
gCGATCATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATAccc > 1:559819/1‑100 (MQ=255)
ttATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAAt < 2:1815481/100‑1 (MQ=255)
tatataACCCACCAGAATCATTTTTCTTAAAGAATACGTTTAGTTTCTTTGTCACTGTCGTTACTATATCGGCTGAAATTAATATAGT‑CATACCCAAATg < 2:46243/100‑1 (MQ=255)
atataACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATgg > 1:3251422/1‑100 (MQ=255)
atataACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGC‑CATACCCAAATgg > 1:187165/1‑100 (MQ=255)
atataACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTAGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATgg > 1:2404449/1‑100 (MQ=255)
ataACCCACAAGAATCATTTTTCTAATACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGAt < 2:2059660/100‑1 (MQ=255)
ataACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAAGT‑CATACCCAAATGGAt > 2:2746775/1‑100 (MQ=255)
taACCCACAAGAATCATTTTTTTTTTTTTTTTCATTTACTTTATTTGTCACTGTCGTTACTATATCGTCTGAAATTAATAAGTT‑CATACCCAAATGtata > 2:1386372/1‑100 (MQ=255)
aaCCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATATGGT‑CATACCCAAATGGATAg < 2:2521125/100‑1 (MQ=255)
aCCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAAGT‑CATACCCAAATGGATAGt > 1:3369972/1‑100 (MQ=255)
cacaAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCg > 1:2733603/1‑100 (MQ=255)
caAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAAGT‑CATACCCAAATGGATAGTTCGtt > 1:1774817/1‑100 (MQ=255)
caAGAATCATTTTTCTAAAACAATACAGTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTGCGtt < 2:1914563/100‑1 (MQ=255)
aGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTAATATAGCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGttt < 2:3452605/99‑1 (MQ=255)
gAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTAc < 1:1984897/100‑1 (MQ=255)
gAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTAc > 1:64517/1‑100 (MQ=255)
aaTCATTTTTCTAAAACAATACATTTACTTTATTTGTCACCATCGTTACTATATCGGCTGAAATTAATAAGGT‑CGTACCCAAATGGATAGTTCGTTTACg < 2:3132199/100‑1 (MQ=255)
aTCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGTCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACg < 2:3963643/99‑1 (MQ=255)
tCATTTTTCTAAGACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGcc < 2:3380078/100‑1 (MQ=255)
tCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGcc < 2:255381/100‑1 (MQ=255)
tCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGcc < 2:292246/100‑1 (MQ=255)
tCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGcc > 1:1564659/1‑100 (MQ=255)
cATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGccc > 1:3180289/1‑100 (MQ=255)
aTTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAAGT‑CATACCCAAATGGATAGTTCGTTTACGCCCa > 1:497473/1‑100 (MQ=255)
ttttttTAAAATAATTCATTTAATTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCTTTTATGctaat > 2:536911/1‑96 (MQ=255)
ttttCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCAtt < 2:3570614/100‑1 (MQ=255)
ttCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGa < 1:919562/100‑1 (MQ=255)
cTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTCAAc > 2:1104783/1‑100 (MQ=255)
tAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCTGCTGAAATTATTAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACa > 2:3219767/1‑100 (MQ=255)
tAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACa > 1:497407/1‑100 (MQ=255)
aaaaCAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACaa > 1:3393417/1‑100 (MQ=255)
aaaCAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACaaa > 1:2885604/1‑100 (MQ=255)
aaaCAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAAT‑AGGTCCATACCCAACTGGATAGTTCGTTTACGCCCATTGAACaaa > 2:2668907/1‑100 (MQ=255)
aaCAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAAt < 1:2414034/100‑1 (MQ=255)
aCAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATg < 2:2282062/100‑1 (MQ=255)
aCAATACATTTACTTTATTTGTCACTGGCGTTACTATATCGGCTGAAATTAATAAAGT‑CATACCCATATGGATAGTTCGTTTACGCCCATTGAACAAATg < 1:1552657/100‑1 (MQ=255)
tACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTaa < 1:3075332/100‑1 (MQ=255)
cATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAAGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGCACAAATGATaaaa > 2:35030/1‑100 (MQ=255)
ttACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAAttt < 2:1634870/100‑1 (MQ=255)
tACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTc > 1:3016961/1‑100 (MQ=255)
aCTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTcg < 1:1975762/100‑1 (MQ=255)
aCTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAAGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTcg > 2:3693799/1‑100 (MQ=255)
cTTTATTTGTCACTGTCGTTACTATATCGGCTGGAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTcgc > 2:3334438/1‑100 (MQ=255)
tttATTTGTCACTGTCGTTACTAGATCGGCTGAAATTAATAAAGT‑CATACCCAAATGGATAGTTCGTTTACGCACATTGAACAAATGCTAAAATTTcgcg < 2:3289675/100‑1 (MQ=255)
tATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTGGTTTAAGCCCATTGAACAAATGCTAAAATTTCGCGcc > 2:2793522/1‑100 (MQ=255)
tttGTCACTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCTCCAg > 2:951127/1‑100 (MQ=255)
tGTCACTGTCGTTACTATATCGGCTGCAATTAATACGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAgcc > 2:2687513/1‑100 (MQ=255)
caaggTCGTTACTATATCTGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGGTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAgccgcc < 2:3883231/96‑1 (MQ=255)
cTGTCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCAc < 1:2161340/100‑1 (MQ=255)
cTGTCGTTACTATATCGGCTGAAATTAATAAAGT‑CATACCCAAATGGCTAGTTCGTGTACGCCCATCGAACAAAGGATAAAATTTCGCGCCAgccgc > 2:3087919/1‑97 (MQ=255)
cTGTCGTTACTATATCGGCTGAAATTAATAAAGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCAc < 2:121574/100‑1 (MQ=255)
gTCGTTACTATATCGGCTGAAATTAATAAAGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGa > 1:2970383/1‑100 (MQ=255)
tCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGaa > 2:3024366/1‑100 (MQ=255)
tCGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTGCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGaa < 2:2039344/100‑1 (MQ=255)
cGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAg > 1:3444389/1‑100 (MQ=255)
cGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAg > 1:3570887/1‑100 (MQ=255)
cGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAg < 2:3773824/100‑1 (MQ=255)
cGTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAg > 1:2551364/1‑100 (MQ=255)
cGTTACTATATCGGCTGAAATTAATAAAGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAg > 1:3831053/1‑100 (MQ=255)
gTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGa < 1:1842083/100‑1 (MQ=255)
gTTACTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGa > 2:237319/1‑100 (MQ=255)
aCTATATCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGAttt < 2:3282265/100‑1 (MQ=255)
atatCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTcc < 2:78700/100‑1 (MQ=255)
atatCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTcc < 2:474360/100‑1 (MQ=255)
atatCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTcc < 1:1542059/100‑1 (MQ=255)
atatCGGCTGAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTcc > 2:2989306/1‑100 (MQ=255)
atatCGCCTCAAATTAATAAGGT‑CATACCCAAATTGATAGTTCTTTTACGCCCATTGAACAAATGCTAAAATTTTGCGCCAGCCGCCACGAAGATTTTcc < 2:86467/100‑1 (MQ=255)
tatCGGCTGAAATTAATAAGGC‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCt < 2:1776932/100‑1 (MQ=255)
cGGCTGAAATTAATAAAGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTAt > 2:903722/1‑100 (MQ=255)
gCTGAAATTAATAAAGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCa < 2:1643306/100‑1 (MQ=255)
gAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGga > 1:2075251/1‑100 (MQ=255)
gAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGga < 1:2964891/100‑1 (MQ=255)
gAAATTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGga > 1:1238832/1‑100 (MQ=255)
aaTTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGgaga < 1:330871/100‑1 (MQ=255)
aTTAATAAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGAt > 1:1742443/1‑100 (MQ=255)
ataaGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCtt > 1:3673290/4‑100 (MQ=255)
ataaGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCtt > 1:2817254/4‑100 (MQ=255)
ataaGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCtt < 2:217654/97‑1 (MQ=255)
ataaGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCtt > 1:1601093/4‑100 (MQ=255)
taaGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCTTc < 1:4012371/98‑1 (MQ=255)
taaGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCTTc > 2:2275216/3‑100 (MQ=255)
aGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCTTCTg < 1:2331750/100‑1 (MQ=255)
ggT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCTTCTGa < 1:2829710/100‑1 (MQ=255)
|
AAAGTGATGGCGATTATATAACCCACAAGAATCATTTTTCTAAAACAATACATTTACTTTATTTGTCACTGTCGTTACTATATCGGCTGAAATTAATGAGGT‑CATACCCAAATGGATAGTTCGTTTACGCCCATTGAACAAATGCTAAAATTTCGCGCCAGCCGCCACGAAGATTTTCCTTATCAGGAGATCCTTCTGA > NC_000913/2810659‑2810857
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
