Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F133 I0 R1
|
200 |
171.4 |
8351354 |
94.3% |
7875326 |
99.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,423,776 |
G→T |
23.8% |
noncoding (12/120 nt) |
rrfD ← |
5S ribosomal RNA of rrnD operon |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,423,776 | 0 | G | T | 23.8%
| 217.8
/ 55.6
| 99 | noncoding (12/120 nt) | rrfD | 5S ribosomal RNA of rrnD operon |
| Reads supporting (aligned to +/- strand): ref base G (19/56); new base T (2/22); total (21/78) |
| Fisher's exact test for biased strand distribution p-value = 9.10e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATC > NC_000913/3423700‑3423846
|
gACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTA > 1:2690779‑M1/1‑100 (MQ=255)
gACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTA < 2:2161906‑M1/100‑1 (MQ=255)
gACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTA < 1:83714‑M1/100‑1 (MQ=255)
aCCCCACACTACCATCGGCGCTACTGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTAT < 1:696278‑M1/100‑1 (MQ=255)
aCCCCACACTACCATCGGCGCTACTGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTAT > 1:126827‑M1/1‑100 (MQ=255)
aCCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTAT < 2:2112433‑M1/100‑1 (MQ=255)
ccccACACTACCATCGGCGCTACTGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATC > 1:2315659‑M1/1‑100 (MQ=255)
ccccACACTACCATCGGCGCTACTGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATC > 2:2078672‑M1/1‑100 (MQ=255)
ccccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATC < 1:527800‑M1/100‑1 (MQ=255)
ccccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATC > 1:1597001‑M1/1‑100 (MQ=255)
ccccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATC > 1:3481187‑M1/1‑100 (MQ=255)
ccccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATC < 2:473219‑M1/100‑1 (MQ=255)
ccccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATC < 1:1031692‑M1/100‑1 (MQ=255)
ccccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATC > 1:1489306‑M1/1‑100 (MQ=255)
ccccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATC > 1:2100341‑M1/1‑100 (MQ=255)
ccccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATC < 2:1114989‑M1/100‑1 (MQ=255)
ccccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATC > 1:2807761‑M1/1‑100 (MQ=255)
ccccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATC > 2:139535‑M1/1‑100 (MQ=255)
cccACACTACCATCGGCGCTACTGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCA < 2:3220584‑M1/100‑1 (MQ=255)
cccACACTACCATCGGCGCTACTGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCA > 1:353210‑M1/1‑100 (MQ=255)
cccACACTACCATCGGCGCTACTGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCA < 1:2003973‑M1/100‑1 (MQ=255)
cccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCA > 1:939818‑M1/1‑100 (MQ=255)
cccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCA > 2:1961720‑M1/1‑100 (MQ=255)
cccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCA < 1:1309116‑M1/100‑1 (MQ=255)
cccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCA < 1:1653681‑M1/100‑1 (MQ=255)
ccaacactacCATCGGCGCTACTGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTAT > 1:2429298‑M1/4‑98 (MQ=255)
ccACACTACCATCGGCGCTACTGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAG < 2:3401192‑M1/100‑1 (MQ=255)
ccACACTACCATCGGCGCTACTGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAG < 1:2558584‑M1/100‑1 (MQ=255)
ccACACTACCATCGGCGCTACTGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAG < 2:343605‑M1/100‑1 (MQ=255)
ccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCCTGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAG > 2:3675087‑M1/1‑100 (MQ=255)
ccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAG < 2:3644306‑M1/100‑1 (MQ=255)
ccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAG > 1:1859260‑M1/1‑100 (MQ=255)
ccACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTAAGTTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAG < 2:560033‑M1/100‑1 (MQ=255)
cacaCTACCATCGGCGCTACTGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGA > 1:3740415‑M1/1‑100 (MQ=255)
cacaCTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGA > 1:1687081‑M1/1‑100 (MQ=255)
acacTACCATCGGCGCTACTGCGTTTCACTTCGGAGTTCGGCATGGGGTCAGGTTGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGA > 2:3749574‑M1/1‑99 (MQ=255)
aTCGGCGCTACTGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaag < 1:62547‑M1/100‑10 (MQ=255)
cgcTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtc < 1:1032321‑M1/100‑15 (MQ=255)
tACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctga < 1:563784‑M1/100‑18 (MQ=255)
actgcgtTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgat < 1:2181094‑M1/97‑19 (MQ=255)
aCGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgat < 1:1400853‑M1/100‑19 (MQ=255)
aCGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgat < 2:647242‑M1/100‑19 (MQ=255)
aCGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgat < 1:973792‑M1/100‑19 (MQ=255)
aCGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgat < 1:530083‑M1/100‑19 (MQ=255)
cGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgata < 1:2225596‑M1/100‑20 (MQ=255)
cGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgata < 1:3386892‑M1/100‑20 (MQ=255)
cGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgata < 2:3851506‑M1/100‑20 (MQ=255)
cGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgata < 1:790512‑M1/100‑20 (MQ=255)
cGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgata < 2:1264569‑M1/100‑20 (MQ=255)
cGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatg < 2:4083894‑M1/100‑20 (MQ=255)
cGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatg < 2:3592142‑M1/100‑20 (MQ=255)
gtgttTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaa < 2:2493270‑M1/98‑22 (MQ=255)
gCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaa < 1:2391658‑M1/100‑22 (MQ=255)
gCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaa < 1:3498777‑M1/100‑22 (MQ=255)
gCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaa < 1:1856487‑M1/100‑22 (MQ=255)
gCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaa < 1:3991682‑M1/100‑22 (MQ=255)
gCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaa < 1:1929224‑M1/100‑22 (MQ=255)
cGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaa < 2:170921‑M1/100‑23 (MQ=255)
cGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaa < 1:3141497‑M1/100‑23 (MQ=255)
cGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaaa < 1:450389‑M1/100‑23 (MQ=255)
gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 2:2829741‑M1/100‑24 (MQ=255)
gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 1:4126712‑M1/100‑24 (MQ=255)
gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 1:3327334‑M1/100‑24 (MQ=255)
gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 1:3134464‑M1/100‑24 (MQ=255)
gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 1:2346093‑M1/100‑24 (MQ=255)
gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 2:1158147‑M1/100‑24 (MQ=255)
gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 1:1205608‑M1/100‑24 (MQ=255)
gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTCTATCAGAacgcagaagcggtctgatagagg > 2:3498750‑M1/1‑77 (MQ=255)
gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 1:882174‑M1/100‑24 (MQ=255)
gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 1:2900164‑M1/100‑24 (MQ=255)
gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 1:1640021‑M1/100‑24 (MQ=255)
gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 1:1059703‑M1/100‑24 (MQ=255)
gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaac < 2:1667922‑M1/100‑24 (MQ=255)
gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaaac < 2:907961‑M1/100‑24 (MQ=255)
gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaaac < 1:257576‑M1/100‑24 (MQ=255)
gTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaaac < 1:4129049‑M1/100‑24 (MQ=255)
gTTTCACTTCTGAGTTCGGAATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTTTGTTTTATCAGAacgcagaagcggtctgataaaac < 2:2328108‑M1/100‑24 (MQ=255)
tttCTCTTCTGAGTTCGGCATGGGGTCAGGTGGGACCAACGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataagaca < 2:1142947‑M1/100‑25 (MQ=255)
tttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaaca < 1:1939759‑M1/100‑25 (MQ=255)
tttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaaca < 1:2047537‑M1/100‑25 (MQ=255)
ttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCCCCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacag < 2:188068‑M1/100‑26 (MQ=255)
ttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacag < 1:1313336‑M1/100‑26 (MQ=255)
ttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacag < 1:939395‑M1/100‑26 (MQ=255)
ttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacag < 1:2589130‑M1/100‑26 (MQ=255)
ttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacag < 1:499729‑M1/100‑26 (MQ=255)
ttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacag < 1:4149693‑M1/100‑26 (MQ=255)
ttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacag < 1:3038212‑M1/100‑26 (MQ=255)
ttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaaacag < 1:3139213‑M1/100‑26 (MQ=255)
ttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaaacag < 2:3044029‑M1/100‑26 (MQ=255)
ttCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTCATCAGAacgcagaagcggtctgatgaaacag < 2:153094‑M1/100‑26 (MQ=255)
tCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacaga < 1:1926574‑M1/100‑27 (MQ=255)
tCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacaga < 1:1569775‑M1/100‑27 (MQ=255)
cACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacagaa < 1:900746‑M1/100‑28 (MQ=255)
cACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacaga < 1:1815438‑M1/99‑27 (MQ=255)
cACTTCTGAGTTCGGCATGGCGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTATGTTTTATCAGAacgcagaagcggtctgataaaacagaa < 2:3613566‑M1/100‑28 (MQ=255)
tCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacag < 2:3974031‑M1/94‑26 (MQ=255)
tGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGACAAATTCTGTTTTACCAGAacgcagaagcggtctgataaaacaga > 2:1059699‑M1/1‑67 (MQ=255)
tGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacagaatttgcc < 1:4102857‑M1/100‑34 (MQ=255)
cATGGGGTCAGGTGGGACCACCGCGCTACTGCCGCCAGGCAAATTCTGTTTTATCAGAacgcagaagcggtctgataaaacagaatttgcctggcggcag < 1:1549492‑M1/100‑43 (MQ=255)
|
GACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATC > NC_000913/3423700‑3423846
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
