Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A3 F50 I1 R1	300	54.7	1718999	98.4%	1691495	149.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,273,906	T→C	intergenic (‑35/‑219)	uvrA ← / → ssb	ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC/single‑stranded DNA‑binding protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,273,906	0	T	C	100.0%	207.7 / NA	59	intergenic (‑35/‑219)	uvrA/ssb	ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC/single‑stranded DNA‑binding protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (26/33); total (26/33)

GGATTTGCCAGAACCCGAAAGCCCGGTCACGACAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGTGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGGTTTGTTTCCCGGAACCGAGGTCACAACATAGTAA  >  NC_000913/4273758‑4274053

ggATTTGCCAGAACCCGAAAGCCCGGTCACGACAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCcggcgg                                                                                                                                                   <  1:198966/151‑1 (MQ=255)

ggATTTGCCAGAACCCGAAAGCCCGGTCACGACAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCcggcgg                                                                                                                                                   <  2:436181/151‑1 (MQ=255)

 gATTTGCCAGAACCCGAAAGCCCGGTCACGACAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCggcggc                                                                                                                                                  >  2:87620/1‑151 (MQ=255)

 gATTTGCCAGAACCCGAAAGCCCGGTCACGACAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCggcggc                                                                                                                                                  >  2:61878/1‑151 (MQ=255)

        cAGAACCCGAAAGCCCGGTCACGACAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGc                                                                                                                                           >  1:504495/1‑151 (MQ=255)

         aGAACCCGAAAGCCCGGTCACGACAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCt                                                                                                                                          <  1:366986/151‑1 (MQ=255)

         aGAACCCGAAAGCCCGGTCACGACAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCt                                                                                                                                          <  1:394579/151‑1 (MQ=255)

            aCCCGAAAGCCCGGTCACGACAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTAcc                                                                                                                                       >  1:732119/1‑151 (MQ=255)

               cGAAAGCCCGGTCACGACAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGc                                                                                                                                    >  1:258443/1‑151 (MQ=255)

                   aGCCCGGTCACGACAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGAt                                                                                                                                 <  2:698998/150‑1 (MQ=255)

                   aGCCCGGTCACGACAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATc                                                                                                                                <  2:633902/151‑1 (MQ=255)

                    gCCCGGTCACGACAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATca                                                                                                                               <  2:566557/151‑1 (MQ=255)

                     cccGGTCACGACAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATcac                                                                                                                              >  1:531556/1‑151 (MQ=255)

                       cGGTCACGACAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACaa                                                                                                                            <  2:336172/151‑1 (MQ=255)

                         gTCACGACAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAAc                                                                                                                          <  1:259769/151‑1 (MQ=255)

                               aCAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTa                                                                                                                     >  2:467139/1‑150 (MQ=255)

                                cAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAAt                                                                                                                   >  2:543697/1‑151 (MQ=255)

                                 aaTGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAAtt                                                                                                                  >  1:236840/1‑151 (MQ=255)

                                  aTGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAAtt                                                                                                                  >  2:549330/1‑150 (MQ=255)

                                  aTGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTa                                                                                                                 <  2:738603/151‑1 (MQ=255)

                                    gAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTAt                                                                                                                <  2:376902/150‑1 (MQ=255)

                                     aGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATg                                                                                                               >  2:382604/1‑150 (MQ=255)

                                         tGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGacac                                                                                                           >  2:820805/1‑150 (MQ=255)

                                          gTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGAcaca                                                                                                          <  2:427837/150‑1 (MQ=255)

                                          gTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACaa                                                                                                         <  2:494746/151‑1 (MQ=255)

                                             gcgGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACaaa                                                                                                        <  1:410126/149‑1 (MQ=255)

                                               gggggATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTg                                                                                                     >  2:415576/1‑150 (MQ=255)

                                                  ggATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCt                                                                                                 <  1:68285/151‑1 (MQ=255)

                                                      aaCGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCtgaa                                                                                              <  1:475150/150‑1 (MQ=255)

                                                            gTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAatat                                                                                       >  2:567763/1‑151 (MQ=255)

                                                                aTGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAg                                                                                   <  2:53102/151‑1 (MQ=255)

                                                                   tttttGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTAt                                                                                >  2:269552/1‑151 (MQ=255)

                                                                    ttttGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTAt                                                                                <  2:133409/150‑1 (MQ=255)

                                                                      ttGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTg                                                                              <  1:582066/150‑1 (MQ=255)

                                                                          gaTTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATg                                                                         >  2:134520/1‑151 (MQ=255)

                                                                           aTTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGc                                                                        >  1:322993/1‑151 (MQ=255)

                                                                           aTTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGc                                                                        <  2:236864/151‑1 (MQ=255)

                                                                              aTGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCAt                                                                      <  1:742121/150‑1 (MQ=255)

                                                                                gggTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTa                                                                    <  2:761034/150‑1 (MQ=255)

                                                                                  gTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTAccc                                                                 <  2:66367/151‑1 (MQ=255)

                                                                                  gTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTAccc                                                                 <  1:61855/151‑1 (MQ=255)

                                                                                    gCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCGCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCgg                                                               <  2:817733/151‑1 (MQ=255)

                                                                                     cGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGa                                                              <  1:254776/151‑1 (MQ=255)

                                                                                          gcCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGtgtt                                                         >  2:315504/1‑151 (MQ=255)

                                                                                            cccGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGtgttgt                                                       <  2:487822/151‑1 (MQ=255)

                                                                                                 aCTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAAc                                                  >  2:41844/1‑151 (MQ=255)

                                                                                                   ttCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACa                                                 >  2:69511/1‑150 (MQ=255)

                                                                                                                aTTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGCTGCTACCGGCGATCACAAACGGATAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAg                                     >  1:426726/1‑149 (MQ=255)

                                                                                                                  tCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGgttt                                 >  1:440848/1‑151 (MQ=255)

                                                                                                                        ttCCCGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGGTTTGTTTc                            <  1:344321/150‑1 (MQ=255)

                                                                                                                          cccGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGGTTTGTTTCCCg                         >  1:131509/1‑151 (MQ=255)

                                                                                                                          cccGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGGTTTGTTTCCCg                         <  1:605825/151‑1 (MQ=255)

                                                                                                                           ccGGATTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGGTTTGTTTCCCgg                        >  1:431069/1‑151 (MQ=255)

                                                                                                                               aTTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGGTTTGTTTCCCGGAAcc                    <  1:48593/151‑1 (MQ=255)

                                                                                                                               aTTAAACGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGGTTTGTTTCCCGGAAcc                    <  1:315480/151‑1 (MQ=255)

                                                                                                                                   aaCGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGGTTTGTTTCCCGGAACCGAgg                >  1:781528/1‑151 (MQ=255)

                                                                                                                                    aCGCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGGTTTGTTTCCCGGAACCGAGGt               <  1:563799/151‑1 (MQ=255)

                                                                                                                                      gCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGGTTTGTTTCCCGGAACCGAGGTca             <  1:855593/151‑1 (MQ=255)

                                                                                                                                      gCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGGTTTGTTTCCCGGAACCGAGGTca             <  1:737831/151‑1 (MQ=255)

                                                                                                                                      gCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGGTTTGTTTCCCGGAACCGAGGTca             <  1:526801/151‑1 (MQ=255)

                                                                                                                                      gCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGGTTTGTTTCCCGGAACCGAGGTc              >  1:786823/1‑150 (MQ=255)

                                                                                                                                      gCTTTTTTGCCCGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGGTTTGTTTCCCGGAACCGAGGTc              >  1:319433/1‑150 (MQ=255)

                                                                                                                                                ccGGCGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGGTTTGTTTCCCGGAACCGAGGTCACAACATAGt    >  2:333564/1‑150 (MQ=255)

                                                                                                                                                 cggcggCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATAAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGGTTTGTTTCCCGGAACCGAGGTCACAACATAGTaa  <  2:23458/151‑1 (MQ=255)

GGATTTGCCAGAACCCGAAAGCCCGGTCACGACAATGAGCTTGTCGCGGGGGATAACGAGGTTGATGTTTTTGAGATTATGGGTGCGGGCGCCCCGAACTTCGATCTTATCCATTCACCTTTCCCGGATTAAACGCTTTTTTGCCCGGTGGCATGGTGCTACCGGCGATCACAAACGGTTAATTATGACACAAATTGACCTGAATGAATATACAGTATTGGAATGCATTACCCGGAGTGTTGTGTAACAATGTCTGGCCAGGTTTGTTTCCCGGAACCGAGGTCACAACATAGTAA  >  NC_000913/4273758‑4274053

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A