Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F50 I2 R1 12 74.5 2311211 99.4% 2297343 150.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,400,453 T→G E212A (GAA→GCA)  mreB ← cell wall structural complex MreBCD, actin‑like component MreB

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,400,4530TG100.0% 236.0 / NA 62E212A (GAA→GCA) mreBcell wall structural complex MreBCD, actin‑like component MreB
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (31/31);  total (31/31)

TGCAGTGCTTCGAGGATTTCATTGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTTCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAACAGCAACTTCAGTGGTACCACCACCGATATCAAC  >  NC_000913/3400306‑3400598
                                                                                                                                                   |                                                                                                                                                 
tGCAGTGCTTCGAGGATTTCATTGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCAc                                                                                                                                                >  1:155120/1‑151 (MQ=255)
 gCAGTGCTTCGAGGATTTCATTGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCAc                                                                                                                                                <  2:388911/150‑1 (MQ=255)
    gTGCTTCGAGGATTTCATTGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGAt                                                                                                                                            <  1:643029/151‑1 (MQ=255)
    gTGCTTCGAGGATTTCATTGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGAt                                                                                                                                            <  2:224126/151‑1 (MQ=255)
      gCTTCGAGGATTTCATTGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATc                                                                                                                                           <  2:1059999/150‑1 (MQ=255)
      gCTTCGAGGATTTCATTGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATc                                                                                                                                           >  2:7058/1‑150 (MQ=255)
      gCTTCGAGGATTTCATTGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCa                                                                                                                                          <  1:559341/151‑1 (MQ=255)
      gCTTCGAGGATTTCATTGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCa                                                                                                                                          <  2:562954/151‑1 (MQ=255)
        ttCGAGGATTTCATTGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATc                                                                                                                                           >  1:1041787/1‑148 (MQ=255)
           gAGGATTTCATTGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAgaga                                                                                                                                      >  2:328065/1‑150 (MQ=255)
           gAGGATTTCATTGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAgaga                                                                                                                                      >  2:102638/1‑150 (MQ=255)
             ggATTTCATTGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAAcc                                                                                                                                   >  2:1084486/1‑151 (MQ=255)
                   cATTGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAAtt                                                                                                                             >  1:118111/1‑151 (MQ=255)
                   cATTGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAAtt                                                                                                                             <  2:322397/151‑1 (MQ=255)
                   cATTGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAAt                                                                                                                              <  1:955450/150‑1 (MQ=255)
                      tGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCATAGAACCGTAATTac                                                                                                                           <  1:85794/150‑1 (MQ=255)
                       ggAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTacg                                                                                                                          <  2:698269/150‑1 (MQ=255)
                       ggAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTacg                                                                                                                          <  2:14603/150‑1 (MQ=255)
                         aGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTacgacg                                                                                                                       >  1:433335/1‑151 (MQ=255)
                          gTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGc                                                                                                                      >  1:395730/1‑151 (MQ=255)
                            tCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGca                                                                                                                     <  2:880469/150‑1 (MQ=255)
                                   aaaaCCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTtg                                                                                                             <  2:500536/151‑1 (MQ=255)
                                   aaaaCCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTtg                                                                                                             >  1:154726/1‑151 (MQ=255)
                                    aaaCCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTtg                                                                                                             >  1:766283/1‑150 (MQ=255)
                                    aaaCCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTAGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTtg                                                                                                             >  2:187583/1‑150 (MQ=255)
                                      aCCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTtgatg                                                                                                          >  1:1024045/1‑151 (MQ=255)
                                      aCCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTtgatg                                                                                                          >  2:42241/1‑151 (MQ=255)
                                        cgcgTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTgatgat                                                                                                        >  2:882831/1‑151 (MQ=255)
                                                acacCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTtcgt                                                                                                <  1:309117/151‑1 (MQ=255)
                                                 cacCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTtcgtc                                                                                               <  1:364628/151‑1 (MQ=255)
                                                       cTGCCAGGTTACGGCCACGAACTTCGATTTCACGGCCTTCATCGCCCGGATAAGCCGAACCGATTTCGCGCTTGATACGTTCTGCGGCGCCTGCACCGATCAGAGAACCGAAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACg                                                                                         >  1:679200/1‑151 (MQ=255)
                                                       cTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACg                                                                                         >  2:602648/1‑151 (MQ=255)
                                                           cAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTca                                                                                     <  2:1129923/151‑1 (MQ=255)
                                                                      cACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATgcg                                                                          >  1:499729/1‑151 (MQ=255)
                                                                        cGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGca                                                                        <  2:8587/151‑1 (MQ=255)
                                                                               cGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACagaag                                                                  <  1:433151/150‑1 (MQ=255)
                                                                               cGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACaga                                                                    >  1:297629/1‑148 (MQ=255)
                                                                                 aTTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAgagg                                                               >  1:274696/1‑151 (MQ=255)
                                                                                   ttCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAgagg                                                               >  1:961391/1‑149 (MQ=255)
                                                                                     cACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGt                                                            <  2:120625/150‑1 (MQ=255)
                                                                                             tCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACca                                                      <  1:847495/148‑1 (MQ=255)
                                                                                              cATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCacac                                                   <  1:678225/150‑1 (MQ=255)
                                                                                              cATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACAcc                                                  >  2:348170/1‑151 (MQ=255)
                                                                                               aTCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCg                                                 <  2:298503/151‑1 (MQ=255)
                                                                                                   cccGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTc                                              >  1:610667/1‑150 (MQ=255)
                                                                                                   cccGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCa                                             <  2:943814/151‑1 (MQ=255)
                                                                                                             ccGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAAc                                   >  1:85111/1‑151 (MQ=255)
                                                                                                                    gATTTCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAACAGCAACt                            <  2:676408/151‑1 (MQ=255)
                                                                                                                       ttCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAACAGCAACTTc                          >  2:1005683/1‑150 (MQ=255)
                                                                                                                       ttCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAACAGCAACTTc                          <  1:88655/150‑1 (MQ=255)
                                                                                                                       ttCGTGCTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAACAGCAACTTc                          <  1:813727/150‑1 (MQ=255)
                                                                                                                             cTTGATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAACAGCAACTTCAGTGGt                    >  2:1131138/1‑150 (MQ=255)
                                                                                                                                gATACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAACAGCAACTTCAGTGGTacca                <  1:710618/151‑1 (MQ=255)
                                                                                                                                 aTACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCAACACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAACAGCAACTTCAGTGGTaccac               >  1:203921/1‑151 (MQ=255)
                                                                                                                                  tACGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAACAGCAACTTCAGTGGTaccacc              >  1:1144910/1‑151 (MQ=255)
                                                                                                                                   aCGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAACAGCAACTTCAGTGGTaccacca             <  2:1101108/151‑1 (MQ=255)
                                                                                                                                    cGTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAACAGCAACTTCAGTGGTaccaccac            <  1:1007606/151‑1 (MQ=255)
                                                                                                                                     gTTCTGCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAACAGCAACTTCAGTGGTaccaccacc           >  2:584648/1‑151 (MQ=255)
                                                                                                                                          gCGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAACAGCAACTTCAGTGGTACCACCACCGat        <  2:819794/149‑1 (MQ=255)
                                                                                                                                           cGGTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAACAGCAACTTCAGTGGTACCACCACCGATATc     >  1:487238/1‑151 (MQ=255)
                                                                                                                                             gTGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCGTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAACAGCAACTTCAGTGGTACCACCACCGat        <  2:826951/146‑1 (MQ=255)
                                                                                                                                              tGGCTGCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAACAGCAACTTCAGTGGTACCACCACCGATATCAac  >  1:997871/1‑151 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
TGCAGTGCTTCGAGGATTTCATTGGAGTTCAGGGTAAAACCGCGTGGAACACCTTCTGCCAGGTTACGGCCACGAACTTCGATTTCACGGACTTCATCGCCCGGATAAGCCGAACCGATTTCGTGCTTGATACGTTCTGCGGTGGCTTCACCGATCAGAGAACCGTAATTACGACGCACATAGTTGATGATAGCTTCGTCGAAACGGTCACCACCAATGCGCACAGAAGAGGAGTAAACCACACCGTTCAAGGAGATAACAGCAACTTCAGTGGTACCACCACCGATATCAAC  >  NC_000913/3400306‑3400598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A