Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F50 I1 R1 12 98.8 3067543 99.3% 3046070 150.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,318,960 C→A A108A (GCC→GCA)  argG → argininosuccinate synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,318,9600CA100.0% 324.6 / NA 81A108A (GCC→GCA) argGargininosuccinate synthetase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (41/40);  total (41/40)

TGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGACCAATGCTGAACTGCAGATTTACAAACCG  >  NC_000913/3318813‑3319104
                                                                                                                                                   |                                                                                                                                                
tGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTg                                                                                                                                               >  1:1409879/1‑151 (MQ=255)
 gCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTg                                                                                                                                               >  2:300890/1‑150 (MQ=255)
 gCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTg                                                                                                                                               <  2:1335752/150‑1 (MQ=255)
   cATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACt                                                                                                                                            <  1:177082/151‑1 (MQ=255)
   cATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACt                                                                                                                                            <  2:1076979/151‑1 (MQ=255)
     tGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTgg                                                                                                                                          >  1:697646/1‑151 (MQ=255)
         aTACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTAcc                                                                                                                                      <  2:1336670/151‑1 (MQ=255)
                gcgGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTgg                                                                                                                               >  1:605760/1‑151 (MQ=255)
                gcgGAGAACGCACGTCTGATACACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTg                                                                                                                                >  2:1223327/1‑150 (MQ=255)
                 cgGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGt                                                                                                                              >  2:1318950/1‑151 (MQ=255)
                 cgGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGt                                                                                                                              <  1:95049/151‑1 (MQ=255)
                    agaACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTtgc                                                                                                                           <  1:304441/151‑1 (MQ=255)
                     gaACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTtgct                                                                                                                          <  2:613975/151‑1 (MQ=255)
                       aCGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTtgctgc                                                                                                                        <  1:439275/151‑1 (MQ=255)
                       aCGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTtgctgc                                                                                                                        <  2:644527/151‑1 (MQ=255)
                         gCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCg                                                                                                                       >  2:1283454/1‑150 (MQ=255)
                         gCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGa                                                                                                                      <  1:46600/151‑1 (MQ=255)
                           aCGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATg                                                                                                                    >  2:684113/1‑151 (MQ=255)
                                tGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGaa                                                                                                                  >  2:1471962/1‑148 (MQ=255)
                                 gATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGaaa                                                                                                                 <  1:148986/148‑1 (MQ=255)
                                 gATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGaaa                                                                                                                 <  2:920275/148‑1 (MQ=255)
                                 gATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAaagaa                                                                                                              <  1:1116432/151‑1 (MQ=255)
                                  aTCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAaaga                                                                                                               >  2:1509978/1‑149 (MQ=255)
                                    cGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAaaga                                                                                                               >  1:508578/1‑147 (MQ=255)
                                        tGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCg                                                                                                       >  1:1057314/1‑151 (MQ=255)
                                         gCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGt                                                                                                      <  2:1516976/151‑1 (MQ=255)
                                            gCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGa                                                                                                    >  2:1019206/1‑150 (MQ=255)
                                              aaaCAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAata                                                                                                 <  2:208414/151‑1 (MQ=255)
                                              aaaCAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAat                                                                                                  >  2:854426/1‑150 (MQ=255)
                                               aacaacTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAatat                                                                                                >  2:912411/1‑151 (MQ=255)
                                               aacaacTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAat                                                                                                  >  1:1143949/1‑149 (MQ=255)
                                               aacaacTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAat                                                                                                  <  2:1143898/149‑1 (MQ=255)
                                                acaacTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATc                                                                                               <  2:723602/151‑1 (MQ=255)
                                                  aacTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTg                                                                                             >  2:1402442/1‑151 (MQ=255)
                                                     tggtggCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACATATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTgggg                                                                                          >  2:1076070/1‑151 (MQ=255)
                                                      ggtggCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGt                                                                                         <  1:1134231/151‑1 (MQ=255)
                                                         ggCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGAc                                                                                      >  1:367998/1‑151 (MQ=255)
                                                            cGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGt                                                                                   >  1:251698/1‑151 (MQ=255)
                                                             gAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGt                                                                                   >  2:309775/1‑150 (MQ=255)
                                                              aaGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGt                                                                                   >  2:506113/1‑149 (MQ=255)
                                                                     tGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTa                                                                           <  2:290787/150‑1 (MQ=255)
                                                                     tGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTAc                                                                          >  2:862506/1‑151 (MQ=255)
                                                                            aTTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGa                                                                    <  2:1208872/150‑1 (MQ=255)
                                                                            aTTCAGTGTGGCGCATTTCATAACACCACCAGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGa                                                                    >  2:413090/1‑150 (MQ=255)
                                                                               cAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAAc                                                                 <  2:929572/150‑1 (MQ=255)
                                                                               cAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACg                                                                >  2:498040/1‑151 (MQ=255)
                                                                               cAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACg                                                                >  2:529357/1‑151 (MQ=255)
                                                                               cAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACg                                                                >  1:1525468/1‑151 (MQ=255)
                                                                                  tgtgGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGat                                                              >  1:1336785/1‑150 (MQ=255)
                                                                                     ggCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATc                                                           <  1:535873/150‑1 (MQ=255)
                                                                                       cgcATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGa                                                         >  2:662495/1‑150 (MQ=255)
                                                                                         cATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACg                                                      >  1:170203/1‑151 (MQ=255)
                                                                                         cATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACg                                                      <  2:1409817/151‑1 (MQ=255)
                                                                                          aTTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGt                                                     <  2:1336885/151‑1 (MQ=255)
                                                                                           tttCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGtt                                                    >  1:1250034/1‑151 (MQ=255)
                                                                                            ttCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGttt                                                   >  2:196452/1‑151 (MQ=255)
                                                                                              cATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCt                                                 >  2:187759/1‑151 (MQ=255)
                                                                                              cATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCt                                                 >  1:751477/1‑151 (MQ=255)
                                                                                                 aaCACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTAt                                               <  1:490413/150‑1 (MQ=255)
                                                                                                   caccacCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGt                                            <  1:38615/151‑1 (MQ=255)
                                                                                                      caccGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTAt                                         <  2:550502/151‑1 (MQ=255)
                                                                                                       accGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATg                                        >  2:872644/1‑151 (MQ=255)
                                                                                                            cggcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTctg                                   >  2:893057/1‑151 (MQ=255)
                                                                                                             ggcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTctgc                                  <  2:251953/151‑1 (MQ=255)
                                                                                                             ggcCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTctgc                                  >  2:75085/1‑151 (MQ=255)
                                                                                                               ccTGACCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGAGGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAGCGTTTCTATCGTTATGGTctgctg                                <  2:1271318/151‑1 (MQ=255)
                                                                                                                  gACCTATTTCAACACGACGCCGCTGGGCCGCACAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGa                               <  1:91964/149‑1 (MQ=255)
                                                                                                                   aCCTATTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGAcc                             >  1:1077915/1‑150 (MQ=255)
                                                                                                                       aTTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGACCAAt                          <  1:658847/149‑1 (MQ=255)
                                                                                                                       aTTTCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGACCAATg                         <  2:1232528/150‑1 (MQ=255)
                                                                                                                          tCAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGACCAATGCTg                      <  1:541428/150‑1 (MQ=255)
                                                                                                                           cAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGACCAATGCTGa                     <  1:1372611/150‑1 (MQ=255)
                                                                                                                           cAACACGACGCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGACCAATGCTGa                     <  2:1001900/150‑1 (MQ=255)
                                                                                                                               acgacgCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGACCAATGCTGAACTGc                >  1:947048/1‑151 (MQ=255)
                                                                                                                                  acgCCGCTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGACCAATGCTGAACTGCAGa             <  1:585699/151‑1 (MQ=255)
                                                                                                                                       gcTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGACCAATGCTGAACTGCAGATTTAc        >  2:664437/1‑151 (MQ=255)
                                                                                                                                       gcTGGGCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGACCAATGCTGAACTGCAGATTTAc        <  1:916643/151‑1 (MQ=255)
                                                                                                                                          gggCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGACCAATGCTGAACTGCAGATTTACaaa     <  2:508558/151‑1 (MQ=255)
                                                                                                                                          gggCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGACCAATGCTGAACTGCAGATTTACaa      <  2:116041/150‑1 (MQ=255)
                                                                                                                                           ggCCGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGACCAATGCTGAACTGCAGATTTACAAAc    >  1:772757/1‑151 (MQ=255)
                                                                                                                                             ccGCGCAGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGACCAATGCTGAACTGCAGATTTACAAACCg  <  2:1024776/151‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                
TGCCATGGAATACGGCGCGGAGAACGCACGTCTGATCGACTGCCGCAAACAACTGGTGGCCGAAGGTATTGCCGCTATTCAGTGTGGCGCATTTCATAACACCACCGGCGGCCTGACCTATTTCAACACGACGCCGCTGGGCCGCGCCGTGACTGGTACCATGCTGGTTGCTGCGATGAAAGAAGATGGCGTGAATATCTGGGGTGACGGTAGCACCTACAAAGGAAACGATATCGAACGTTTCTATCGTTATGGTCTGCTGACCAATGCTGAACTGCAGATTTACAAACCG  >  NC_000913/3318813‑3319104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A