Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F50 I2 R1
|
15 |
101.6 |
3165943 |
99.0% |
3134283 |
150.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| MC JC |
NC_000913 |
3,197,154 |
Δ12 bp |
coding (2477‑2488/2841 nt) |
glnE ← |
fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
NC_000913 |
3197154 |
3197165 |
12 |
98 [0] |
[1] 99 |
glnE |
fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 3197153 | 0 (0.000) | 92 (0.970) |
76/280 |
0.3 |
100% |
coding (2489/2841 nt) |
glnE |
fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |
| ? | NC_000913 |
3197166 = |
0 (0.000) | coding (2476/2841 nt) |
glnE |
fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |
GATK/CNVnator alignment
N/A
