Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F50 I2 R1
|
173 |
150.8 |
4954114 |
96.5% |
4780720 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
598,492 |
A→G |
E338E (GAA→GAG) |
cusB → |
copper/silver efflux system, membrane fusion protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 598,492 | 0 | A | G | 99.2%
| 447.6
/ NA
| 125 | E338E (GAA→GAG) | cusB | copper/silver efflux system, membrane fusion protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (65/59); minor base C (0/1); total (65/60) |
| Fisher's exact test for biased strand distribution p-value = 4.80e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
Only 100 of 126 total aligned reads displayed.
GCGACCCGCACGCTGCAGCTGCGTCTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAACAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCAGCGGCCTGTTCCTGATTGATTCC > NC_000913/598346‑598639
|
gcgACCCGCACGCTGCAGCTGCGTCTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGagcagc < 2:297616/151‑1 (MQ=255)
gACCCGCACGCTGCAGCTGCGTCTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCgg > 4:731276/1‑151 (MQ=255)
cccGCACGCTGCAGCTGCGTCTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCgg < 1:1341578/149‑1 (MQ=255)
cccGCACGCTGCAGCTGCGTCTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGt < 1:883158/151‑1 (MQ=255)
ccGCACGCTGCAGCTGCGTCTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTg > 4:1125595/1‑151 (MQ=255)
ccGCACGCTGCAGCTGCGTCTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTg > 1:155638/1‑151 (MQ=255)
gCACGCTGCAGCTGCGTCTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGAt > 4:303202/1‑151 (MQ=255)
cgcGCTGCAGCTGCGTCTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGAt < 4:408216/148‑1 (MQ=255)
cGCTGCAGCTGCGTCTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTAc > 3:496261/1‑151 (MQ=255)
cGCTGCAGCTGCGTCTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTAc < 3:136177/151‑1 (MQ=255)
cTGCAGCTGCGTCTGGAAGTCGACAACGCCGCCGAGGCCCTAAAACCGGGCATGAACCCCTGGTTGCAACTAAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTAcc < 4:871255/150‑1 (MQ=255)
cAGCTGCGTCTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGtt < 1:1377697/150‑1 (MQ=255)
gctggctcgggAGGTCGACAACGTCAACGAGGCGCTAAAGCCGGCCATGAGCGCCTGGTTTCAATTCAACTCCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATGCCGGCATCGACCAGCGGGTGATTACCGTTGAt < 3:315575/142‑1 (MQ=255)
gCGTCTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGc < 1:414525/150‑1 (MQ=255)
tCTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGAc > 3:158616/1‑151 (MQ=255)
cTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACg > 1:1604623/1‑151 (MQ=255)
cTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACg > 1:634208/1‑151 (MQ=255)
cGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCttt > 4:1166806/1‑151 (MQ=255)
cGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCttt > 2:10392/1‑151 (MQ=255)
cAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGt > 1:492130/1‑150 (MQ=255)
cGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCg > 2:161045/1‑134 (MQ=255)
gCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCg > 1:1321602/1‑150 (MQ=255)
gCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCg > 1:1287611/1‑150 (MQ=255)
gCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCg > 1:1552586/1‑150 (MQ=255)
gCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCg > 1:1849614/1‑150 (MQ=255)
gacgaGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGaaa > 4:397829/1‑150 (MQ=255)
gacgaGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAAc < 3:39862/151‑1 (MQ=255)
gacgaGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAAc < 4:1543828/151‑1 (MQ=255)
gacgaGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAAc < 4:339378/151‑1 (MQ=255)
cgaGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAAcgc < 2:310438/151‑1 (MQ=255)
cgaGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAAcg < 4:464537/150‑1 (MQ=255)
aGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGt > 1:802567/1‑151 (MQ=255)
aGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGt > 4:1480378/1‑151 (MQ=255)
ggCGCTAAACCCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGtt < 4:1817178/151‑1 (MQ=255)
gcgcTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTg > 4:1210291/1‑151 (MQ=255)
gcTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCt > 2:201594/1‑151 (MQ=255)
tAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGt > 4:32033/1‑151 (MQ=255)
aCCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTc < 4:1126275/151‑1 (MQ=255)
ccGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTcc < 1:1166307/151‑1 (MQ=255)
ccGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTc < 4:352709/150‑1 (MQ=255)
cGGGCATGAACTCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCa < 3:378320/151‑1 (MQ=255)
cGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCa < 4:885413/151‑1 (MQ=255)
cATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGc > 1:252826/1‑150 (MQ=255)
aTGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCAt > 4:1740111/1‑151 (MQ=255)
gAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCg < 1:610687/151‑1 (MQ=255)
cGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCa > 4:283221/1‑150 (MQ=255)
gCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCa > 4:427021/1‑149 (MQ=255)
ccTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAg < 4:1885663/150‑1 (MQ=255)
ggTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCg < 1:852836/150‑1 (MQ=255)
ggTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGt > 3:194206/1‑151 (MQ=255)
gTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTc > 4:319155/1‑151 (MQ=255)
tGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCAc > 1:106513/1‑151 (MQ=255)
aCTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGc > 4:468676/1‑150 (MQ=255)
cTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCa < 2:393695/150‑1 (MQ=255)
cAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCAtt > 4:1016403/1‑150 (MQ=255)
cAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCAtt > 1:1281700/1‑150 (MQ=255)
cAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCAt < 1:893556/149‑1 (MQ=255)
cAACACCGCCAGCGAACCGATGCTGCGCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCAtt < 4:1410562/150‑1 (MQ=255)
aaCACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTAc < 2:532121/151‑1 (MQ=255)
acacCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACg > 1:490240/1‑151 (MQ=255)
cGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGctct < 2:514911/151‑1 (MQ=255)
cGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGctct < 2:216455/151‑1 (MQ=255)
cGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGctct < 1:159708/151‑1 (MQ=255)
gCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCtctg < 4:487263/151‑1 (MQ=255)
ccAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCtctgg > 4:1760248/1‑151 (MQ=255)
aGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCtctggtc > 1:1391728/1‑151 (MQ=255)
cGAACCGTTGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCtctggtctg > 3:356130/1‑151 (MQ=255)
cGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCtctggtctg < 4:1392295/151‑1 (MQ=255)
gAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCtctggtctgg < 2:215324/151‑1 (MQ=255)
gAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCtctggtctgg > 1:1873443/1‑151 (MQ=255)
aaCCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGc > 2:288474/1‑151 (MQ=255)
aaCCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGc < 4:1355508/151‑1 (MQ=255)
aCCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCg < 1:1116682/151‑1 (MQ=255)
aTGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGa > 4:1890384/1‑149 (MQ=255)
aTGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAg < 4:841512/151‑1 (MQ=255)
gctgctCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAgg < 1:780381/150‑1 (MQ=255)
tCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGaaa > 2:129978/1‑150 (MQ=255)
cATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCGTTACGCTCTGGTCTGGCGGAAGGTGaaa < 4:740384/149‑1 (MQ=255)
aTTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAgg > 3:414298/1‑151 (MQ=255)
aTTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAgg > 4:109335/1‑151 (MQ=255)
aTTCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAg < 4:895328/150‑1 (MQ=255)
ttCCGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAggt > 4:806922/1‑151 (MQ=255)
ccGTCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAAGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAggtgg < 3:36336/151‑1 (MQ=255)
tCACAAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGtt < 4:132655/150‑1 (MQ=255)
acaAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTcc < 3:218732/151‑1 (MQ=255)
caAGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCa < 1:1780065/151‑1 (MQ=255)
aaGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCAg < 4:1605254/151‑1 (MQ=255)
aaGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCAg < 4:393458/151‑1 (MQ=255)
aaGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCAg < 3:489358/151‑1 (MQ=255)
aGCGCTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGCTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGCTTCCAGc > 1:1076711/1‑151 (MQ=255)
cgcTGATTGATACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCAGCgg < 4:1553198/151‑1 (MQ=255)
tgattgatACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCAGCGGCCt > 4:1267549/1‑151 (MQ=255)
tgatACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCAGCGGCCTGtt < 4:568908/150‑1 (MQ=255)
tgatACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCAGCGGCCTGtt < 1:730958/150‑1 (MQ=255)
tgatACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCAGCGGCCTGTTc > 1:1012536/1‑151 (MQ=255)
gatACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCAGCGGCCTGTTcc > 1:1048631/1‑151 (MQ=255)
atACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCAGCGGCCTGTTCCt < 3:207073/151‑1 (MQ=255)
tACCGGCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCAGCGGCCTGTTCCtg > 2:250738/1‑151 (MQ=255)
gCAGCGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCAGCGGCCTGTTCCtgattga < 2:108201/151‑1 (MQ=255)
cGAGCAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCAGCGGCCTGTTCCTGATTGATTcc > 4:1356134/1‑151 (MQ=255)
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GCGACCCGCACGCTGCAGCTGCGTCTGGAAGTCGACAACGCCGACGAGGCGCTAAAACCGGGCATGAACGCCTGGTTGCAACTCAACACCGCCAGCGAACCGATGCTGCTCATTCCGTCACAAGCGCTGATTGATACCGGCAGCGAACAGCGGGTGATTACCGTTGATGCCGACGGGCGCTTTGTACCGAAACGCGTTGCTGTTTTCCAGGCATCGCAAGGCGTCACCGCATTACGCTCTGGTCTGGCGGAAGGTGAAAAGGTGGTTTCCAGCGGCCTGTTCCTGATTGATTCC > NC_000913/598346‑598639
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
