Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F50 I1 R1 163 55.0 1534755 98.6% 1513268 150.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 613,368 T→C V211A (GTC→GCC)  fes → enterobactin/ferrienterobactin esterase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913613,3680TC100.0% 263.2 / NA 75V211A (GTC→GCC) fesenterobactin/ferrienterobactin esterase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (39/36);  total (39/36)

ATACCTGCCAAAGAAATTATCTGGAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGTCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGCGGATTTCTGGCTCGCAGTACAGCAAGAGTTATT  >  NC_000913/613223‑613512
                                                                                                                                                 |                                                                                                                                                
aTACCTGCCAAAGAAATTATCTGGAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTGTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGc                                                                                                                                             <  1:304676/151‑1 (MQ=255)
  aCCTGCCAAAGAAATTATCTGGAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCa                                                                                                                                           <  1:343319/151‑1 (MQ=255)
  aCCTGCCAAAGAAATTATCTGGAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTAACACCGGCGATGCAAAAGCAGAAGAACGCCCGCCGGCAGTTTTGCTCGATGGCGAAATTTTGGCGCAAAGTATGCCCGCCTGGcc                                                                                                                                            >  2:354693/1‑150 (MQ=255)
      gCCAAAGAAATTATCTGGAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGc                                                                                                                                       <  1:385716/151‑1 (MQ=255)
          aaGAAATTATCTGGAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTAACACCGGCGATGCAAAAACAGAAGAACGCCCGCTGGCAGGTTTGCTCGATGGCGAATTTTGGGCGCAAAGGATGCCCGCCTGGCCAGTGCTGAc                                                                                                                                   >  2:376745/1‑151 (MQ=255)
           aGAAATTATCTGGAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTTCTCGATGGGGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGAc                                                                                                                                   >  1:199750/1‑150 (MQ=255)
           aGAAATTATCTGGAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGAc                                                                                                                                   >  1:400308/1‑150 (MQ=255)
            gAAATTATCTGGAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACtt                                                                                                                                 <  1:277765/151‑1 (MQ=255)
             aaaTTATCTGGAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACtt                                                                                                                                 <  2:491528/150‑1 (MQ=255)
               aTTATCTGGAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATTGATTTTTACCACCGGCGATGCAACAGCAGAAAAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTTGGCGCCAAGTATGCCCGCCCGGCCAGTGCTGGCtt                                                                                                                                 >  2:688916/1‑148 (MQ=255)
               aTTATCTGGAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTc                                                                                                                                >  2:16473/1‑149 (MQ=255)
                  aTCTGGAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGGTTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCCGGCAGGTTTGCTCGATGGCGAATTTTTGGCGCAAAGGAAGCCCGCCTGGCCAGTGCTGACTTCg                                                                                                                               >  2:514015/1‑147 (MQ=255)
                    cTGGAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTg                                                                                                                            <  2:395848/148‑1 (MQ=255)
                       gAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCAt                                                                                                                      <  1:111823/151‑1 (MQ=255)
                       gAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAAAGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAATATGCCCGCCTGGCCAGTGCTGACTTCGCTGAccc                                                                                                                        >  2:686580/1‑149 (MQ=255)
                           aGTCAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGGAGTTTTGCTCGATGGCGAAATTTGGGCGCCAAGAATGCCCGCCTCGCCAGGGCTCACTTCCCTGACCCATCg                                                                                                                    >  2:362878/1‑149 (MQ=255)
                               aaCGGTTGAAAAAGTCACGGCGTGTATGGATTTTTTCCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAg                                                                                                                >  1:591052/1‑149 (MQ=255)
                                aCGGTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCa                                                                                                              <  1:493552/150‑1 (MQ=255)
                                  ggTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGGATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACt                                                                                                           >  1:605271/1‑151 (MQ=255)
                                    ttGAAAAAGTCACGGCGTGTATGGATTTTTACCCCCGGCGGTGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTTCTCGATGGCGAATTTTGGGCGCAAAGGATGCCCCCCTGGGCAGTGCTGACTTCGCTGGCCCCTCGTCAGCAACCtc                                                                                                         >  2:664888/1‑151 (MQ=255)
                                     tGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTTCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACCTCGCTGACCCCTCGTCAGCAACTtcc                                                                                                        >  2:576133/1‑151 (MQ=255)
                                      gAAAAAGTCACGGCGTGTATGGGTTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCCGGCAGGTTTTCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTtcc                                                                                                        >  1:191351/1‑150 (MQ=255)
                                      gAAAAAGTCACGGCGTGTATGGGTTTTTACCACCGGCGATGCAAAAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGGCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTtcc                                                                                                        >  2:543385/1‑150 (MQ=255)
                                      gAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTtcct                                                                                                       <  1:191819/151‑1 (MQ=255)
                                         aaaGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAAAGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTTGGCGCAAAGGATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTccc                                                                                                    >  1:751722/1‑151 (MQ=255)
                                              cACGGGGTGTATGGATTTTTACCCCCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCACCGTCAGCAACTTCCTCccgccg                                                                                                <  1:374427/150‑1 (MQ=255)
                                                cGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCgtg                                                                                              >  1:722179/1‑150 (MQ=255)
                                                    gtgtATGGATTTTTCCCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTAtg                                                                                          <  2:33744/150‑1 (MQ=255)
                                                    gtgtATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTAtgt                                                                                         >  1:50038/1‑151 (MQ=255)
                                                     tgtATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTAtgtg                                                                                        >  1:112935/1‑151 (MQ=255)
                                                         tGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTg                                                                                     >  1:760838/1‑150 (MQ=255)
                                                          ggATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGAt                                                                                   <  1:635155/151‑1 (MQ=255)
                                                          ggATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGAt                                                                                   <  1:13881/151‑1 (MQ=255)
                                                            aTTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCg                                                                                 >  1:386097/1‑151 (MQ=255)
                                                                  accaccGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCt                                                                            <  1:441026/150‑1 (MQ=255)
                                                                   ccaccGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTAt                                                                          >  2:485590/1‑151 (MQ=255)
                                                                    caccGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCt                                                                            <  1:550505/148‑1 (MQ=255)
                                                                    caccGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATc                                                                         <  1:303067/151‑1 (MQ=255)
                                                                    caccGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATc                                                                         <  2:690990/151‑1 (MQ=255)
                                                                      ccGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCg                                                                        >  1:157613/1‑150 (MQ=255)
                                                                        ggCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGaca                                                                     <  2:221459/151‑1 (MQ=255)
                                                                        ggCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGac                                                                      >  1:555330/1‑150 (MQ=255)
                                                                         gCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGacac                                                                    >  1:272745/1‑151 (MQ=255)
                                                                           gATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGAcacc                                                                   >  2:120722/1‑150 (MQ=255)
                                                                              gCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACg                                                                <  1:567131/150‑1 (MQ=255)
                                                                              gCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGc                                                               >  2:715048/1‑151 (MQ=255)
                                                                                aaCAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCAc                                                             <  1:161820/151‑1 (MQ=255)
                                                                                  cagcagAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCAcc                                                            >  2:632118/1‑150 (MQ=255)
                                                                                  cagcagAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCAcc                                                            <  2:301328/150‑1 (MQ=255)
                                                                                         agaaCGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCAc                                                    >  1:78182/1‑151 (MQ=255)
                                                                                            aCGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGa                                                  >  1:565187/1‑150 (MQ=255)
                                                                                              gCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACt                                               >  2:561404/1‑151 (MQ=255)
                                                                                               cccGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACt                                               <  1:359832/150‑1 (MQ=255)
                                                                                               cccGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACt                                               <  1:332169/150‑1 (MQ=255)
                                                                                               cccGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTg                                              >  1:125422/1‑151 (MQ=255)
                                                                                               cccGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTg                                              <  1:766322/151‑1 (MQ=255)
                                                                                                ccGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGc                                             >  1:599854/1‑151 (MQ=255)
                                                                                                    tGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCg                                           <  1:536859/149‑1 (MQ=255)
                                                                                                     ggCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCgtgt                                        >  1:42803/1‑151 (MQ=255)
                                                                                                        aGTTTTGCTCGATGGCGAATTTTGGCCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCTTCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTa                                       <  2:134382/149‑1 (MQ=255)
                                                                                                          ttttGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATg                                    <  2:430058/150‑1 (MQ=255)
                                                                                                           tttGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGc                                   <  1:394285/150‑1 (MQ=255)
                                                                                                            ttGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGCg                                  <  1:570108/150‑1 (MQ=255)
                                                                                                                tCGATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGCGGAttt                             >  1:262509/1‑151 (MQ=255)
                                                                                                                  gATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGCGGATTTCt                           <  1:434576/151‑1 (MQ=255)
                                                                                                                  gATGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGCGGATTTCt                           >  2:9174/1‑151 (MQ=255)
                                                                                                                   aTGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGCGGATTTc                            <  1:4100/149‑1 (MQ=255)
                                                                                                                   aTGGCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGCGGATTTCTg                          <  1:195102/151‑1 (MQ=255)
                                                                                                                     ggCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGCGGATTTCTgg                         <  1:308649/150‑1 (MQ=255)
                                                                                                                      gCGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGCGGATTTCTGGCt                       >  1:292528/1‑151 (MQ=255)
                                                                                                                       cGAATTTTGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGCGGATTTCTGGCTc                      >  1:182943/1‑151 (MQ=255)
                                                                                                                             ttGGGCGCAAAGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGCGGATTTCTGGCTCGCAGt                 >  1:584592/1‑150 (MQ=255)
                                                                                                                                       aGTATGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGCGGATTTCTGGCTCGCAGTACAGCAAGAGt      <  1:680531/151‑1 (MQ=255)
                                                                                                                                          aTGCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGCGGATTTCTGGCTCGCAGTACAGCAAGAGttat   <  1:694016/151‑1 (MQ=255)
                                                                                                                                            gCCCGCCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGCGGATTTCTGGCTCGCAGTACAGCAAGAGttatt  <  1:38451/150‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                
ATACCTGCCAAAGAAATTATCTGGAAAAGTGAACGGTTGAAAAAGTCACGGCGTGTATGGATTTTTACCACCGGCGATGCAACAGCAGAAGAACGCCCGCTGGCAGTTTTGCTCGATGGCGAATTTTGGGCGCAAAGTATGCCCGTCTGGCCAGTGCTGACTTCGCTGACCCATCGTCAGCAACTTCCTCCCGCCGTGTATGTGTTGATCGACGCTATCGACACCACGCACCGCGCCCACGAACTGCCGTGTAATGCGGATTTCTGGCTCGCAGTACAGCAAGAGTTATT  >  NC_000913/613223‑613512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A