Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F50 I1 R1	157	93.7	2947622	98.1%	2891617	150.3

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	706,802	A→G	N237S (AAC→AGC)	glnS →	glutamyl‑tRNA synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	706,802	0	A	G	100.0%	306.3 / NA	83	N237S (AAC→AGC)	glnS	glutamyl‑tRNA synthetase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (45/38); total (45/38)

GATCCGGTGCTGTACCGTATTAAATTTGCTGAACACCACCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAACCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACCTGCTGGTGACCGACAAGCACGTTGAAGG  >  NC_000913/706654‑706946

gATCCGGTGCTGTACCGTATTAAATTTGCTGAACACCACCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGcc                                                                                                                                                >  1:378130/1‑151 (MQ=255)

    cGGTGCTGTACCGTATTAAATTTGCTGAACACCACCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCcgtcg                                                                                                                                            >  1:126744/1‑151 (MQ=255)

        gCTGTACCGTATTAAATTTGCTGAACACCACCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCt                                                                                                                                         <  2:959819/150‑1 (MQ=255)

        gCTGTACCGTATTAAATTTGCTGAACACCACCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTg                                                                                                                                        >  1:1008304/1‑151 (MQ=255)

          tGTACCGTATTAAATTTGCTGAACACCACCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTg                                                                                                                                        >  1:769146/1‑149 (MQ=255)

           gTACCGTATTAAATTTGCTGAACACCACCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGt                                                                                                                                       <  1:346230/149‑1 (MQ=255)

                      aaTTTGCTGAACACCACCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACt                                                                                                                          >  1:1458174/1‑151 (MQ=255)

                       aTTTGCTGAACACCACCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTg                                                                                                                         <  1:1251178/151‑1 (MQ=255)

                         ttGCTGAACACCACCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTgg                                                                                                                        <  1:755411/150‑1 (MQ=255)

                           gCTGAACACCACCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGac                                                                                                                      <  1:229572/150‑1 (MQ=255)

                              gAACACCACCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGacaac                                                                                                                   >  2:136244/1‑150 (MQ=255)

                              gAACACCACCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGacaac                                                                                                                   <  1:425091/150‑1 (MQ=255)

                               aaCACCACCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACAt                                                                                                                 >  1:1239892/1‑151 (MQ=255)

                                 caccacCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATc                                                                                                                >  2:1109687/1‑150 (MQ=255)

                                  accaccAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCAc                                                                                                              >  1:692428/1‑151 (MQ=255)

                                   ccaccaGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACg                                                                                                             <  1:170669/151‑1 (MQ=255)

                                    caccaGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACg                                                                                                             <  2:851853/150‑1 (MQ=255)

                                      ccaGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGAtt                                                                                                          >  1:699869/1‑151 (MQ=255)

                                       caGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTc                                                                                                         >  2:644609/1‑151 (MQ=255)

                                       caGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTc                                                                                                         <  1:1019629/151‑1 (MQ=255)

                                       caGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTc                                                                                                         >  1:1135812/1‑151 (MQ=255)

                                         gACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCt                                                                                                       <  2:126726/151‑1 (MQ=255)

                                            tGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGtt                                                                                                    >  2:317101/1‑151 (MQ=255)

                                             ggCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGt                                                                                                     <  1:312498/149‑1 (MQ=255)

                                             ggCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTc                                                                                                   >  1:576386/1‑151 (MQ=255)

                                              gCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCa                                                                                                  <  1:644398/151‑1 (MQ=255)

                                                  caaGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCcg                                                                                              >  1:280699/1‑151 (MQ=255)

                                                     gtggtgCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCgcgc                                                                                           <  2:872903/151‑1 (MQ=255)

                                                       ggtgCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGcc                                                                                          >  2:378832/1‑150 (MQ=255)

                                                        gtgCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAg                                                                                        <  1:974877/151‑1 (MQ=255)

                                                        gtgCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAg                                                                                        <  2:301419/151‑1 (MQ=255)

                                                         tgCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGt                                                                                       >  2:1341557/1‑151 (MQ=255)

                                                          gCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTa                                                                                      <  2:466447/151‑1 (MQ=255)

                                                               tACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGt                                                                                 >  2:1239551/1‑151 (MQ=255)

                                                               tACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGt                                                                                 >  1:958198/1‑151 (MQ=255)

                                                                aCCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGt                                                                                 <  1:1370006/150‑1 (MQ=255)

                                                                  ccGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTtct                                                                              >  1:453917/1‑151 (MQ=255)

                                                                    gATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTcg                                                                            >  1:609237/1‑151 (MQ=255)

                                                                    gATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTcg                                                                            <  2:1326607/151‑1 (MQ=255)

                                                                    gATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGAGTACGATTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGAACTGGACAACATCACGATTCCTGTTCACCCGCGTCAGTATGAGTTCTcg                                                                            >  2:500706/1‑151 (MQ=255)

                                                                     aTGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTcgc                                                                           <  2:699790/151‑1 (MQ=255)

                                                                       gTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCgcgc                                                                         <  1:529671/151‑1 (MQ=255)

                                                                           gACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTg                                                                      >  2:148499/1‑150 (MQ=255)

                                                                               tCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCt                                                                 >  1:665964/1‑151 (MQ=255)

                                                                                  cccACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGa                                                              <  2:1008210/151‑1 (MQ=255)

                                                                                  cccACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGa                                                              <  1:789402/151‑1 (MQ=255)

                                                                                   ccACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGaa                                                             <  2:541119/151‑1 (MQ=255)

                                                                                   ccACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGa                                                              >  1:531772/1‑150 (MQ=255)

                                                                                     aCTGCATCAGCGATGCCCTGGAAGTTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATa                                                           <  2:868652/151‑1 (MQ=255)

                                                                                        gCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATaca                                                         <  2:1109117/150‑1 (MQ=255)

                                                                                         cATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACAcc                                                       <  2:242044/151‑1 (MQ=255)

                                                                                             aGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTg                                                    >  1:72021/1‑150 (MQ=255)

                                                                                              gCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGAt                                                  <  1:1468056/151‑1 (MQ=255)

                                                                                               cGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATg                                                 >  2:920069/1‑151 (MQ=255)

                                                                                               cGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATg                                                 >  2:1007913/1‑151 (MQ=255)

                                                                                                   gCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCa                                             <  2:609165/151‑1 (MQ=255)

                                                                                                    cccTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCa                                             >  2:962806/1‑150 (MQ=255)

                                                                                                     ccTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCa                                             >  2:507452/1‑149 (MQ=255)

                                                                                                       tGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCg                                         >  1:80805/1‑151 (MQ=255)

                                                                                                       tGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCg                                         >  1:1209340/1‑151 (MQ=255)

                                                                                                        ggAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCg                                         <  1:323031/150‑1 (MQ=255)

                                                                                                             gTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGtt                                   <  2:104506/151‑1 (MQ=255)

                                                                                                                ttACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGa                                 >  1:44197/1‑150 (MQ=255)

                                                                                                                 tACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAAc                               >  1:125849/1‑151 (MQ=255)

                                                                                                                  aCGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAAc                               <  1:495338/150‑1 (MQ=255)

                                                                                                                  aCGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAAc                               <  1:299131/150‑1 (MQ=255)

                                                                                                                   cGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACct                             <  2:378296/151‑1 (MQ=255)

                                                                                                                   cGCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACct                             >  2:707575/1‑151 (MQ=255)

                                                                                                                    gCACTCTCTGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACctg                            >  1:7931/1‑151 (MQ=255)

                                                                                                                         ctctGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACctgctg                         <  1:247205/149‑1 (MQ=255)

                                                                                                                          tctGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACCTGCTGGTg                      >  1:484708/1‑151 (MQ=255)

                                                                                                                           ctGTGTACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACCTGCTGGTg                      >  1:697137/1‑150 (MQ=255)

                                                                                                                             gtgtACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACCTGCTGGTGa                     <  1:1062120/149‑1 (MQ=255)

                                                                                                                                tACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACCTGCTGGTGACCGAc                >  1:518781/1‑151 (MQ=255)

                                                                                                                                tACGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACCTGCTGGTGACCGAc                >  1:1356401/1‑151 (MQ=255)

                                                                                                                                  cGCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACCTGCTGGTGACCGACa               >  1:960660/1‑150 (MQ=255)

                                                                                                                                   gCTTGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACCTGCTGGTGACCGACa               >  1:764954/1‑149 (MQ=255)

                                                                                                                                      tGAGTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACCTGCTGGTGACCGACAAGCAc          >  1:806858/1‑151 (MQ=255)

                                                                                                                                         gTTCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACCTGCTGGTGACCGACAAGCACGtt       <  1:648128/151‑1 (MQ=255)

                                                                                                                                           tCCAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACCTGCTGGTGACCGACAAGCACGTTg      <  2:1262801/150‑1 (MQ=255)

                                                                                                                                            ccAGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGACCCTGCTGGTGACCGACAAGCACGTTGaa    <  2:1239792/151‑1 (MQ=255)

                                                                                                                                              aGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACCTGCTGGTGACCGACAAGCACGTTGAAgg  >  2:174937/1‑151 (MQ=255)

                                                                                                                                              aGGACAGCCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACCTGCTGGTGACCGACAAGCACGTTGAAgg  >  1:884039/1‑151 (MQ=255)

GATCCGGTGCTGTACCGTATTAAATTTGCTGAACACCACCAGACTGGCAACAAGTGGTGCATCTACCCGATGTACGACTTCACCCACTGCATCAGCGATGCCCTGGAAGGTATTACGCACTCTCTGTGTACGCTTGAGTTCCAGGACAACCGTCGTCTGTACGACTGGGTACTGGACAACATCACGATTCCTGTTCACCCGCGCCAGTATGAGTTCTCGCGCCTGAATCTGGAATACACCGTGATGTCCAAGCGTAAGTTGAACCTGCTGGTGACCGACAAGCACGTTGAAGG  >  NC_000913/706654‑706946

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A