Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F50 I1 R1 157 93.7 2947622 98.1% 2891617 150.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,025,889 G→A A127T (GCC→ACC)  yedP → putative mannosyl‑3‑phosphoglycerate phosphatase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,025,8890GA100.0% 347.3 / NA 90A127T (GCC→ACC) yedPputative mannosyl‑3‑phosphoglycerate phosphatase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (49/41);  total (49/41)

GCTTGCTGAGCAATGGCAGGAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCGCCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGCTTACAGTTTATGCAGGGT  >  NC_000913/2025741‑2026035
                                                                                                                                                    |                                                                                                                                                  
gCTTGCTGAGCAATGGCAGGAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCAcc                                                                                                                                                  >  1:513227/1‑151 (MQ=255)
gCTTGCTGAGCAATGGCAGGAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCAcc                                                                                                                                                  >  2:610922/1‑151 (MQ=255)
       gAGCAATGGCAGGAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCCTGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATgg                                                                                                                                            <  2:147845/150‑1 (MQ=255)
       gAGCAATGGCAGGAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATgg                                                                                                                                            <  2:1440719/150‑1 (MQ=255)
       gAGCAATGGCAGGAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATgg                                                                                                                                            >  1:16639/1‑150 (MQ=255)
       gAGCAATGGCAGGAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATg                                                                                                                                             <  1:1309553/149‑1 (MQ=255)
         gCAATGGCAGGAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACg                                                                                                                                         >  1:609367/1‑151 (MQ=255)
          cAATGGCAGGAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACgg                                                                                                                                        <  2:1186873/151‑1 (MQ=255)
           caTGGCAGGAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACggg                                                                                                                                       >  2:225068/2‑151 (MQ=255)
           aaTGGCAGGAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACggg                                                                                                                                       >  2:733521/1‑151 (MQ=255)
                 aGGAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTaa                                                                                                                                  <  1:707605/150‑1 (MQ=255)
                  ggAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGc                                                                                                                                <  1:376275/151‑1 (MQ=255)
                  ggAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGc                                                                                                                                >  2:450999/1‑151 (MQ=255)
                    agaTAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCg                                                                                                                              >  1:374044/1‑151 (MQ=255)
                        aGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGc                                                                                                                          <  1:19902/151‑1 (MQ=255)
                          aCGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCa                                                                                                                        <  1:1000954/151‑1 (MQ=255)
                           cGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAg                                                                                                                       <  1:236271/151‑1 (MQ=255)
                             gTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAggc                                                                                                                     >  2:1023819/1‑151 (MQ=255)
                             gTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAggc                                                                                                                     >  1:162958/1‑151 (MQ=255)
                                   cACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCt                                                                                                               <  1:1016948/151‑1 (MQ=255)
                                    aCGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTg                                                                                                              >  2:975423/1‑151 (MQ=255)
                                        atcatcTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGc                                                                                                          >  1:1358783/1‑151 (MQ=255)
                                                aGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCAt                                                                                                  >  2:400957/1‑151 (MQ=255)
                                                  gTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGa                                                                                                <  2:430064/151‑1 (MQ=255)
                                                     ttAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGc                                                                                             >  2:377784/1‑151 (MQ=255)
                                                      tAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGc                                                                                             <  1:788528/150‑1 (MQ=255)
                                                      tAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCg                                                                                            >  1:40752/1‑151 (MQ=255)
                                                         ccATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCg                                                                                         <  2:830905/151‑1 (MQ=255)
                                                          cATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGGCTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCgg                                                                                        <  1:981136/151‑1 (MQ=255)
                                                             ggCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTa                                                                                      <  2:222501/150‑1 (MQ=255)
                                                              gCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAAc                                                                                    >  1:1061386/1‑151 (MQ=255)
                                                              gCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAAc                                                                                    <  1:73173/151‑1 (MQ=255)
                                                               cGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACg                                                                                   >  1:278887/1‑151 (MQ=255)
                                                                     cAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATc                                                                             <  1:1166808/151‑1 (MQ=255)
                                                                         cTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGgc                                                                         >  1:564204/1‑151 (MQ=255)
                                                                         cTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGgc                                                                         >  2:1364539/1‑151 (MQ=255)
                                                                         cTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGgc                                                                         >  1:939568/1‑151 (MQ=255)
                                                                           ggTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGgcgc                                                                       >  2:356271/1‑151 (MQ=255)
                                                                           ggTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGgcg                                                                        <  1:119508/150‑1 (MQ=255)
                                                                               ttAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGAc                                                                    >  2:976796/1‑150 (MQ=255)
                                                                                tAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGAc                                                                    >  2:1181244/1‑149 (MQ=255)
                                                                                tAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACa                                                                   <  2:513169/150‑1 (MQ=255)
                                                                                 aaaTACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGt                                                                 <  1:1004404/151‑1 (MQ=255)
                                                                                 aaaTACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGt                                                                 >  2:564124/1‑151 (MQ=255)
                                                                                 aaaTACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGt                                                                 <  2:461361/151‑1 (MQ=255)
                                                                                 aaaTACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGt                                                                 <  1:297823/151‑1 (MQ=255)
                                                                                  aaTACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGTATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTg                                                                <  2:1195884/151‑1 (MQ=255)
                                                                                   ctacgctacgcGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTg                                                                >  2:1344874/2‑150 (MQ=255)
                                                                                   aTACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGa                                                               <  1:1112196/151‑1 (MQ=255)
                                                                                   aTACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGa                                                               <  1:1381154/151‑1 (MQ=255)
                                                                                    tacgctacgcGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGAc                                                              >  2:832164/1‑151 (MQ=255)
                                                                                        ctacgcGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGc                                                          >  1:561812/1‑151 (MQ=255)
                                                                                          acgcGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGc                                                          <  2:609295/149‑1 (MQ=255)
                                                                                          acgcGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGc                                                          <  2:1054672/149‑1 (MQ=255)
                                                                                           cgcgAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGt                                                        >  2:200794/1‑150 (MQ=255)
                                                                                            gcgAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTAt                                                      <  2:1432930/151‑1 (MQ=255)
                                                                                             cgAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATg                                                     >  2:145880/1‑151 (MQ=255)
                                                                                                 aaagaaCATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGcac                                                 <  2:492433/151‑1 (MQ=255)
                                                                                                   agaaCATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGcaca                                                >  2:1007774/1‑150 (MQ=255)
                                                                                                            tAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGc                                       >  1:1188141/1‑150 (MQ=255)
                                                                                                            tAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGc                                       <  2:573439/150‑1 (MQ=255)
                                                                                                               aTTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGt                                   >  2:1100067/1‑151 (MQ=255)
                                                                                                               aTTCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGt                                   >  1:705047/1‑151 (MQ=255)
                                                                                                                 tCACGACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCt                                 >  1:1231590/1‑151 (MQ=255)
                                                                                                                     gACTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTgaac                             >  2:516712/1‑151 (MQ=255)
                                                                                                                      aCTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTgaacg                            <  1:733600/151‑1 (MQ=255)
                                                                                                                       cTTTTGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTgaacg                            >  2:1389232/1‑150 (MQ=255)
                                                                                                                        ttttGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTgaacga                           >  2:809192/1‑150 (MQ=255)
                                                                                                                        ttttGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTgaacga                           >  2:1089947/1‑150 (MQ=255)
                                                                                                                         tttGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTgaacgaac                         >  2:1468258/1‑151 (MQ=255)
                                                                                                                         tttGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTgaacgaa                          <  1:451052/150‑1 (MQ=255)
                                                                                                                         tttGATGATGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTgaacga                           <  2:1243596/149‑1 (MQ=255)
                                                                                                                           tgatgaTGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACt                        <  2:531613/150‑1 (MQ=255)
                                                                                                                           tgatgaTGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACt                        <  2:1340559/150‑1 (MQ=255)
                                                                                                                           tgatgaTGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTg                       >  2:965501/1‑151 (MQ=255)
                                                                                                                           tgatgaTGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGACGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTgaacgaa                          >  2:344585/1‑148 (MQ=255)
                                                                                                                            gatgatGTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTACGGCACAATTTACCGCTCGTCTGAACGAACTg                       <  1:610995/150‑1 (MQ=255)
                                                                                                                              tgatgTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGc                    >  1:1232738/1‑151 (MQ=255)
                                                                                                                                  gTCGACGATGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGCTTAc                >  1:131256/1‑151 (MQ=255)
                                                                                                                                    cgacgaTGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGCTTACa               <  2:1358678/150‑1 (MQ=255)
                                                                                                                                    cgacgaTGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGCTTACAg              <  2:1018337/151‑1 (MQ=255)
                                                                                                                                      acgaTGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAAATTACCGCTCGTCTGAACGAACTGGGCTTACAGtt            >  2:914666/1‑151 (MQ=255)
                                                                                                                                       cgaTGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGCTTACAGttt           >  1:1115622/1‑151 (MQ=255)
                                                                                                                                       cgaTGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGCTTACAGttt           >  1:369432/1‑151 (MQ=255)
                                                                                                                                         aTGCAACCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGCTTACAGTTTAt         <  1:948434/151‑1 (MQ=255)
                                                                                                                                         aTGCAACCATCACCGAATGGACGGGATTAAGACGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGCTTACAGttt           >  1:913034/1‑149 (MQ=255)
                                                                                                                                              aCCATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGCTTACAGTTTATGCAgg    <  1:1305488/151‑1 (MQ=255)
                                                                                                                                                cATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGCTTACAGTTTATGCAggg   >  2:568716/1‑150 (MQ=255)
                                                                                                                                                cATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGCTTACAGTTTATGCAGGGt  <  1:336625/151‑1 (MQ=255)
                                                                                                                                                cATCACCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGCTTACAGTTTATGCAGGGt  >  1:411406/1‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
GCTTGCTGAGCAATGGCAGGAGATAGACGGTTTTCCACGCATCATCTCAGGTATTAGCCATGGCGAAATCAGCCTGGTTTTAAATACGCTACGCGAGAAAGAACATTTTAAATTCACGACTTTTGATGATGTCGACGATGCAACCATCGCCGAATGGACGGGATTAAGCCGTAGCCAGGCGGCGCTGACGCAGCTTCATGAGGCGTCGGTAACGCTAATCTGGCGCGACAGTGACGAGCGTATGGCACAATTTACCGCTCGTCTGAACGAACTGGGCTTACAGTTTATGCAGGGT  >  NC_000913/2025741‑2026035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A