Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F50 I3 R1
|
105 |
107.9 |
3491495 |
95.1% |
3320411 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,242,307 |
C→T |
L258L (CTG→CTA) |
ldcA ← |
murein tetrapeptide carboxypeptidase; LD‑carboxypeptidase A |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,242,307 | 0 | C | T | 99.0%
| 416.0
/ NA
| 105 | L258L (CTG→CTA) | ldcA | murein tetrapeptide carboxypeptidase; LD‑carboxypeptidase A |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (51/52); total (53/52) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 105 total aligned reads displayed.
TTTTTTTACATTTTAAGAACAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGACAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCATGATAGAGCTGCAACAGCATACGTT > NC_000913/1242161‑1242452
|
tttACATTTTAAGAACAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCggg > 1:1126481/1‑150 (MQ=255)
aCATTTTAAGAACAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAAc < 2:949224/150‑1 (MQ=255)
cATTTTAAGAACAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGc > 1:1122683/1‑151 (MQ=255)
cATTTTAAGAACAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGc > 1:578818/1‑151 (MQ=255)
aTTTTAAGAACAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGc > 4:346993/1‑150 (MQ=255)
aTTTTAAGAACAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCa < 3:175839/151‑1 (MQ=255)
aaGAACAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACAAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAAc < 3:186271/151‑1 (MQ=255)
aGAACAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAAcg < 1:1018069/151‑1 (MQ=255)
gAACAAGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAAcgc < 1:429892/151‑1 (MQ=255)
aaCAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAAcgcg < 2:75954/151‑1 (MQ=255)
aaCAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAAcgcg < 2:144691/151‑1 (MQ=255)
aaCAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGAAACGCCAAAAcgcg > 3:150461/1‑151 (MQ=255)
aCAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGAGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAAAGCAAAAAcgcg > 1:965559/1‑150 (MQ=255)
cAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTa < 2:1009020/151‑1 (MQ=255)
aGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTac < 1:808114/151‑1 (MQ=255)
gATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTacac > 4:163083/1‑151 (MQ=255)
gATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTaca > 1:720884/1‑150 (MQ=255)
aTGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTacac > 1:1096354/1‑150 (MQ=255)
gACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGa < 4:251279/151‑1 (MQ=255)
tAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTcc > 2:918949/1‑149 (MQ=255)
aaTCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAgg < 4:21017/151‑1 (MQ=255)
cGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGtt < 2:178019/150‑1 (MQ=255)
cGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGtt > 1:1001461/1‑150 (MQ=255)
cGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTg < 2:1035792/151‑1 (MQ=255)
cAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTa < 2:171361/150‑1 (MQ=255)
aaCTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAAc > 1:300334/1‑151 (MQ=255)
aCTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAAcc > 3:14552/1‑151 (MQ=255)
aCTGAGTGCCTTCCCGCGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACCGACTCCAGGGTGTTAcc > 4:56737/1‑151 (MQ=255)
cTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAAcc > 1:466270/1‑150 (MQ=255)
aGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCg < 1:829484/151‑1 (MQ=255)
aGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGGTGTAACCTGCg > 2:356372/1‑151 (MQ=255)
gTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGt < 2:151150/151‑1 (MQ=255)
gCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTc > 1:1261712/1‑150 (MQ=255)
gCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCa < 2:831297/151‑1 (MQ=255)
ccTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCa > 4:175990/1‑150 (MQ=255)
ccTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCAt < 2:837260/151‑1 (MQ=255)
tCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATaa > 3:30384/1‑150 (MQ=255)
tCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATa < 2:452713/149‑1 (MQ=255)
cccGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAAt > 1:258524/1‑150 (MQ=255)
cccGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATc < 1:947207/151‑1 (MQ=255)
cccGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATc < 1:852038/151‑1 (MQ=255)
ccGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCa < 1:914465/151‑1 (MQ=255)
cGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCAt < 1:162972/151‑1 (MQ=255)
ggTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTg < 1:283499/151‑1 (MQ=255)
tgtTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTggg > 2:1026052/1‑151 (MQ=255)
gtTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGTAGGCAAAAAAGCGGACACTGAATCCAGGGTGTAACCCACGTCATAATCATTgg > 2:882774/1‑149 (MQ=255)
gtTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGc < 4:48238/151‑1 (MQ=255)
tCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGtgc < 1:1250671/150‑1 (MQ=255)
tCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGtgc < 2:320253/150‑1 (MQ=255)
cAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGtgctg < 1:283015/151‑1 (MQ=255)
aGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGtgctgc > 1:626791/1‑151 (MQ=255)
aGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGtgctgc > 1:1022221/1‑151 (MQ=255)
gAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGcc > 1:315879/1‑151 (MQ=255)
gAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGcc > 1:1210590/1‑151 (MQ=255)
tGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACCCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGc > 2:241066/1‑150 (MQ=255)
ggCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCt > 4:85108/1‑150 (MQ=255)
cATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTaa < 1:865341/150‑1 (MQ=255)
aTGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGGTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTaa > 3:59177/1‑149 (MQ=255)
gtgCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGc < 1:1108985/150‑1 (MQ=255)
cgcCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTAcc > 2:868291/1‑151 (MQ=255)
cccAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCga < 1:134832/151‑1 (MQ=255)
ccAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCgag < 2:1074159/151‑1 (MQ=255)
ccAACGGCAGCGTAACAGTGCGTTGGTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCgag < 2:295972/151‑1 (MQ=255)
cAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAAACTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTAcc > 1:1153474/1‑147 (MQ=255)
cAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATc < 1:1241721/151‑1 (MQ=255)
cGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGcc < 2:361310/151‑1 (MQ=255)
cGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGcc < 1:236495/151‑1 (MQ=255)
aaCCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGCTAGGCGGGAACGCAAAAACACGTAAACCGACTCCAGGATGTAAACTGCGTCATAATCATTGGGCGTGCTGTCGCTAAAGCTACCGAGAATAATCGCCtt > 2:383164/1‑150 (MQ=255)
aaCCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCtt < 2:414740/150‑1 (MQ=255)
aaCCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCtt < 1:44674/150‑1 (MQ=255)
aaCCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCtt < 4:235872/150‑1 (MQ=255)
gTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGAc < 4:274183/151‑1 (MQ=255)
tGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACg > 4:333254/1‑151 (MQ=255)
cGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGAGAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTGGTAACCTTCGGCATAATCATTGGGCGAGCTGCCGCTAAAGCTAAAGAGAATAAGCGACTTCTg > 2:286391/1‑146 (MQ=255)
tgttCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGaataa > 4:43827/1‑133 (MQ=255)
tgttCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGaataa < 3:43827/133‑1 (MQ=255)
tCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCaaa > 1:254328/1‑150 (MQ=255)
cATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAAt > 1:246970/1‑151 (MQ=255)
cAAAATCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGc < 4:168045/151‑1 (MQ=255)
aaaaTCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGc > 4:800/1‑150 (MQ=255)
aaaaTCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGc > 1:1269973/1‑150 (MQ=255)
aaaTCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCAt > 2:822695/1‑151 (MQ=255)
aaaTCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGCGGCAAAATTCCCGCAt > 2:844306/1‑151 (MQ=255)
aTCGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCAt > 2:989267/1‑149 (MQ=255)
cGAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCATGATa < 3:208627/151‑1 (MQ=255)
gAGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCATGAt > 1:1239024/1‑149 (MQ=255)
aGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCATGAt > 4:366122/1‑148 (MQ=255)
aGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCATGAt > 4:459342/1‑148 (MQ=255)
aGGCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCATGATaga < 4:340196/151‑1 (MQ=255)
gCCGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCATGATAGAGc > 1:496207/1‑151 (MQ=255)
cGGTAGTGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTCCGTCATAATCATTGCGCGTGCTGCCGCTAAAGCCACCGAGGATAATCGCCTTTTGACGTGGCAATATTCCCGCATGATagagacg > 2:158574/1‑148 (MQ=255)
cGGTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCATGATAGAGCTg > 3:417324/1‑151 (MQ=255)
ggTAATGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCATGATAGAGCTGc < 4:417330/151‑1 (MQ=255)
aTGAGTAGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCATGATAGAGCTGCAACa < 3:57547/151‑1 (MQ=255)
tGAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCATGATAGAGCTGCAAc > 2:483027/1‑149 (MQ=255)
gAGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCATGATAGAGCTGCAACAGc < 2:764659/151‑1 (MQ=255)
aGTGGAATCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCATGATAGAGCTGCAACAGCa < 2:1126913/151‑1 (MQ=255)
gTGGAATCGATAGGCGGGAACCCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCATGATAGAGCTGCAACAGc > 2:201138/1‑149 (MQ=255)
aTCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCATGATAGAGCTGCAACAGCATACGtt < 2:606236/151‑1 (MQ=255)
aTCGATAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCATGATAGAGCTGCAACAGCATACGtt < 1:498474/151‑1 (MQ=255)
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TTTTTTTACATTTTAAGAACAGGATGACCGCTAATCGTCAACTGAGTGCCTTCCCGGGTGTTATTCAGAATGGCATGTGCGCCCAACGGCAGCGTAACCGTGCGTTGTTCATGACCAAAATCGAGGCCGGTAATGAGTGGAATCGACAGGCGGGAACGCAAAAACGCGTACACTGACTCCAGGTTGTAACCTGCGTCATAATCATTGGGCGTGCTGCCGCTAAAGCTACCGAGAATAATCGCCTTCTGACGTGGCAAAATTCCCGCATGATAGAGCTGCAACAGCATACGTT > NC_000913/1242161‑1242452
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
