Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F50 I3 R1
|
105 |
107.9 |
3491495 |
95.1% |
3320411 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,222,366 |
T→C |
V61A (GTG→GCG) |
dld → |
D‑lactate dehydrogenase, FAD‑binding, NADH independent |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,222,366 | 0 | T | C | 94.4%
| 228.5
/ NA
| 92 | V61A (GTG→GCG) | dld | D‑lactate dehydrogenase, FAD‑binding, NADH independent |
| Reads supporting (aligned to +/- strand): ref base T (1/0); major base C (29/56); minor base G (5/0); total (36/56) |
| Fisher's exact test for biased strand distribution p-value = 6.33e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTC > NC_000913/2222219‑2222512
|
ttttGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGgcgc < 1:210861/150‑1 (MQ=255)
tgaaCTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGGGCCGGAAga > 4:20524/1‑149 (MQ=255)
tgaaCTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCCGGAAGcc > 2:42891/1‑151 (MQ=255)
aaCTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGGGCTGAAAGcc > 1:241298/1‑149 (MQ=255)
aCTTGCTCGTCTGGTGGGTTCTTCGCACCTGCTCACCGATCCCGCAAAAACGGCCCGCTAG‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGc < 1:49050/151‑1 (MQ=255)
aCTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGGTGAAAGGCt > 2:392732/1‑149 (MQ=255)
tGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCg < 2:2088/149‑1 (MQ=255)
tGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCg < 2:84666/149‑1 (MQ=255)
gCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTc < 2:897677/150‑1 (MQ=255)
gCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCa < 1:1225658/151‑1 (MQ=255)
ggtggGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGAc < 1:466795/151‑1 (MQ=255)
ggtggGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCG‑TTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACa < 2:381828/151‑1 (MQ=255)
cacaCCTGCTCCCCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTc < 2:986122/150‑1 (MQ=255)
acacCTGCTCACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGAGCTGATAGACACCGTCACCGCCGCCCAAaatattt > 4:386009/1‑148 (MQ=255)
cacCTGCTCACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGa < 1:1253852/151‑1 (MQ=255)
cacCTGCTCACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCCGCGTCACCGCCCGCAAAaatatt > 2:1186118/1‑147 (MQ=255)
cacCTGCTCACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAACCTGCGTCCCCCCCGCCAAAattatttt > 2:1235998/1‑147 (MQ=255)
cacACTGATCCCGCAAAAACGGCCC‑TTATCCGCAAGGGCTGCCGTCCTGGAAGGGTGGACGCGCGGGCTGTCCTTTTCCCTGACACACGTCTATAATTGTGGCGGCCTCGGAAACCCTGCGTCACCGCCGACAAAATTATTCTGATGCAgg < 2:673520/149‑1 (MQ=255)
cACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGGGCTGAAAACCTGCGGCACCGCCGACAAAATTATTCTGATGCAAgcc > 4:287579/1‑151 (MQ=255)
cACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCGGGCTTTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATg < 4:195714/145‑1 (MQ=255)
aTCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCaa < 1:143926/151‑1 (MQ=255)
aTCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCa < 2:1251038/150‑1 (MQ=255)
tCCCTCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCCGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGgccgccca > 1:21432/1‑148 (MQ=255)
cccGAAAAAACGGCCCGCTAT‑CGAAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCTTTAAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGgc < 1:606372/143‑1 (MQ=255)
cGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACa < 1:242254/151‑1 (MQ=255)
cAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCCGCGTCACCGCCGACAAAATTATTTTTATGCAGGCCGCCAATa > 2:1267315/1‑147 (MQ=255)
aaaaaCGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTTCGTCACCGCCGACAAAAATATTCTGATTCAGGCCGCCAATACAgg > 1:1207621/1‑150 (MQ=255)
aaaaaCGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAgg < 1:883546/150‑1 (MQ=255)
aaaaaCGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGc < 2:895772/151‑1 (MQ=255)
cGGCCCGTTAT‑CGCAAGGGCTTCCGTTCGGGTCAGGGCGACGCGCTGGCTGTCTTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGAc < 2:268113/151‑1 (MQ=255)
cGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGGAAACCCGCGTCCCCCCCCCCAAAAATATTTTGATGCAGggcgcccaaa > 3:28849/1‑137 (MQ=255)
ggCCCGCTAT‑CGCAAGGTCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAAAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGAcc < 2:360656/151‑1 (MQ=255)
cccGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGa < 1:667417/151‑1 (MQ=255)
cccGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAAATATTCTGATGCAGGCCGCCAATACAGGCCTGAcc > 1:225609/1‑149 (MQ=255)
gCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAGGCCGGCGTCCCCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAgg < 1:988654/151‑1 (MQ=255)
cTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGGAAGCCCGCGTCACCGCCGACAAAAATATTCTGATGCAAGCCGCCCATACAGGCCTGACCGaa > 1:113406/1‑148 (MQ=255)
tAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAgg < 2:1207600/149‑1 (MQ=255)
aT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCCGAAAACCTGCGGCACCCCCGGCAAAATAATTCTCATGGAGGCCGCCCCTACCGGCCCCACCGAAGGGTc > 2:1036518/1‑151 (MQ=255)
aT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATc < 1:766020/151‑1 (MQ=255)
t‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATc < 1:546887/150‑1 (MQ=255)
gCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTTATGCCGGCCGCCCATAAAAGCCTGACCGAAGGATCg > 1:677636/1‑149 (MQ=255)
cAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGAc < 1:61329/150‑1 (MQ=255)
gggCTTCCGTTCTGGTCGGGGCGACGCGCTGGATGTCGTTTTCCCGGGCTCACTACAAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGcc < 4:203466/150‑1 (MQ=255)
ggCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCaa < 2:10741/151‑1 (MQ=255)
ggCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTAACCGCCGACAAAATTATTCTGATCCAGGCGGCCAATTCATGCCTGACCGAAGGATCGACGGCaa < 2:358063/151‑1 (MQ=255)
gCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCGCAAAGTCCGAGACCCCGCCGACACAATTATTTTTGTGGAGGCCCCCAATACAGGCGAGACCCAAGGaaggcagccca > 2:1104985/1‑140 (MQ=255)
ttCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAAc < 2:320596/150‑1 (MQ=255)
ttCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAACCTGCGGCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGCAGGATCGACGCCAAAc > 1:436167/1‑150 (MQ=255)
tCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACg < 1:892533/150‑1 (MQ=255)
cctttCTGGTCAGGGCGCCGCGCGGGCTGTCGTTTTCCCTGGCGCACTACAAGATTTGTGGGGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGt < 2:754106/148‑1 (MQ=255)
ccGTTCTGGTCAGGGCGCCGCGCTGGCTGTCGTTTTCCCGGGCTCACTACAAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCaaa < 2:348074/147‑1 (MQ=255)
ccGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACg < 2:872231/149‑1 (MQ=255)
ccGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGt < 2:765491/151‑1 (MQ=255)
cGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGGCGAAAACCCGCGTCACCCCCGACAAAAATATTCTGATGCAGGCCCCCCATAAAGGACCGACCCAAGGGTAGACGcc > 2:6055/1‑143 (MQ=255)
ttCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTa < 2:898487/149‑1 (MQ=255)
ggTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAAc < 4:184454/141‑1 (MQ=255)
ggTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGAtt < 1:424844/151‑1 (MQ=255)
cAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGGGCTGAAAGCCTGCGTCCCCGCCCACAAAAATATTTTGTTGCAGGCCGCCCATACAGGCCTGACCCAAGGATCGACGCCAAACGGTAACGAtt > 3:282026/1‑148 (MQ=255)
gggCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGAt < 1:661839/151‑1 (MQ=255)
tgACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAACCTTCGTCACCGCCGGCAAAAATATTTTGATGCCGGCCGCCCATACAGGCCTGGCCGGCGGAACGACGCCAAACGGGAACGATTATGAt > 2:514711/2‑148 (MQ=255)
gACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGGGCCGGAAACCTGCGGCACCGCCGGCAAAAAAATTTTGATGCAGGCCGCCAATACAAGCCTGACCGAAGGATCGACGCCAAAAGGGTAAGATtattataggg > 3:173023/1‑147 (MQ=255)
gACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATcgc < 4:297536/150‑1 (MQ=255)
gACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATcg < 2:932493/149‑1 (MQ=255)
aCGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGGAAGCCTGCGTCCCCGCCCACAAAATTATTCTGATGGGGGCCGCCCACACAAGCCCTACCGCAGGAGCGACCCCCAACGGTAACGAGTGTGATc > 4:417325/1‑147 (MQ=255)
aCGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCCCCCCCCGCAAAATTATTTTTATGCAGGCCGCCCAAACAAGCCCGGCCCGAGGAAGGGCGCCCAACGGGAACGAtt > 2:936912/1‑141 (MQ=255)
gcgcTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCCGAAAACCTTCGTTACCGCCCCCAAAAATATTATTATGCATGCCGCCAATACAGGCCCGACCCAAAGAACGACGGCAAACGGGAACgcatttttacgcg > 1:752271/1‑136 (MQ=255)
cgcTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGt < 1:167285/151‑1 (MQ=255)
ggctgTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCg < 1:83678/149‑1 (MQ=255)
gctgTCGTTTCCCCTGGCTCACTACTAGAATTGTGACGGGCGCTGAAAGCCTGCGTCCCCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCg < 1:239174/148‑1 (MQ=255)
tgTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGGTGGAAGACTTCGTCGCCCCCCGAAAAATTAATCTGAAGCAGGCCGCCAAAACAGGGCCGACCGAAGGAGCAGCGACAAAAGGTAACAATTATTATAGCGGTGTAGTTa > 2:627070/1‑149 (MQ=255)
cGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCCATACAGGGCTGACCGAAGGGTCGACGCCCAAAGGGAACGAATATTATTGCGATGTCGTTatca > 2:1031926/1‑149 (MQ=255)
cGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTatcat < 4:418633/150‑1 (MQ=255)
cGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTatcat < 1:903856/150‑1 (MQ=255)
cGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTatc < 1:439301/148‑1 (MQ=255)
gTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTAtcatca < 1:940415/151‑1 (MQ=255)
tttCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAg < 2:982156/150‑1 (MQ=255)
tttCCCTGGCTCACTACTAGAATTGTGGCGGGCCCTGAAAACCCTCCTCCCCCCCCACAAAATTATTTTGGTGGAAGCCGCCAATAAACGGCTGAACCCAGGGACGACCCCAAACGGCAACGATTATTAGCCCGATGGCGGTatcat > 2:1123384/1‑147 (MQ=255)
ttCCCTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGGCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGGAGGATCGACGCCCAACGGTAACGATTATGATCGCGATGTCGTTTTCATCAGc > 1:455053/1‑150 (MQ=255)
tCCCTGGCTCACTACTAGAATTGTGGCGGGCGCGGAAAACCCGCGTCACCGCCGCCAAAAATATTCTGGTGCAGGCCCCCAATACAGGCCTGACCGAAGGGTTCACGCCCAAAGGGAACGAATATTATCGCGGTGTCGTTATCATCAGCAc > 1:599409/1‑151 (MQ=255)
cccTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAACCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGGTCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCAcc > 1:726528/1‑151 (MQ=255)
ccTGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCAccc < 3:309361/151‑1 (MQ=255)
tGGCTCACTACTAGAATTGTGGCGGGCGCTGAAAACCCGCGCCCCCGCCGACAAAAATATTATGATGTAGGCCGCCAATACAAGCCCGACCGCAGGGACGACGCCAAACGGGAACGAATATAATCGCGATGTCGTTATCATCAACAcc > 4:14255/1‑148 (MQ=255)
ggCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCt < 1:359014/149‑1 (MQ=255)
ggCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCt < 2:582669/149‑1 (MQ=255)
ggCTCACTACTAGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAACTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCt < 1:357912/149‑1 (MQ=255)
cTCACTACTAGAATTGTGGCGGGCGCTGAAAACCCGCGTCACCCCCGCCAAAAATATTTTTATGCAGGCCGCCCATACAGGGCTGACCGAAGGAACGACGCCAAACGGGAACGATTATGATCGCGGTGTCGTTATAATCAGCACCCCGc > 2:775021/1‑149 (MQ=255)
ctactaGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGtct < 1:277234/149‑1 (MQ=255)
actaGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGAc < 2:245742/151‑1 (MQ=255)
aGAATTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACa < 1:301594/149‑1 (MQ=255)
aaTTGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAg > 1:444752/1‑149 (MQ=255)
aTTGTGGCGGGCGCTGGAAGCCCGCGGCACCCCCCCCAAAAATATTTTGATGCAGGCCGCCCAAACAGGCCCGGCCGAAGGATCGACGCCAAACGGTAACGATTATGATTGCGATGTCGTTTTCATCCACACCCCGCCTCCCCACaa > 3:231739/1‑147 (MQ=255)
ttGTGGCGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCAAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTg < 1:1176156/150‑1 (MQ=255)
cGGGCGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTc > 1:1103341/1‑151 (MQ=255)
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TTTTGAATGAACTTGCTCGTCTGGTGGGTTCTTCACACCTGCTCACCGATCCCGCAAAAACGGCCCGCTAT‑CGCAAGGGCTTCCGTTCTGGTCAGGGCGACGCGCTGGCTGTCGTTTTCCCTGGCTCACTACTAGAATTGTGGCGGGTGCTGAAAGCCTGCGTCACCGCCGACAAAATTATTCTGATGCAGGCCGCCAATACAGGCCTGACCGAAGGATCGACGCCAAACGGTAACGATTATGATCGCGATGTCGTTATCATCAGCACCCTGCGTCTCGACAAGCTGCACGTTC > NC_000913/2222219‑2222512
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
