Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A8 F50 I2 R1	150	68.2	2132745	98.7%	2105019	150.2

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,696,856	T→C	D66G (GAC→GGC)	uidR ←	transcriptional repressor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,696,856	0	T	C	100.0%	275.8 / NA	73	D66G (GAC→GGC)	uidR	transcriptional repressor
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (39/34); total (39/34)

ACGCATCCCTTCCGCCATAATTTCAACCACCAGCGCCCGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGTCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGAAAAAATCTCTCTGGCAGCATTG  >  NC_000913/1696711‑1697002

aCGCATCCCTTCCGCCATAATTTCAACCACCAGCGCCCGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTg                                                                                                                                                <  2:249067/150‑1 (MQ=255)

    aTCCCTTCCGCCATAATTTCAACCACCAGCGCCCGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTa                                                                                                                                              >  2:498853/1‑148 (MQ=255)

             gCCATAATTTCAACCACCAGCGCCCGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCt                                                                                                                                  <  1:473546/151‑1 (MQ=255)

              ccATAATTTCAACCACCAGCGCCCGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTg                                                                                                                                 >  2:264018/1‑151 (MQ=255)

               cATAATTTCAACCACCAGCGCCCGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGa                                                                                                                                <  2:307265/151‑1 (MQ=255)

                aTAATTTCAACCACCAGCGCCCGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGa                                                                                                                                >  1:283640/1‑150 (MQ=255)

                  aaTTTCAACCACCAGCGCCCGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATc                                                                                                                             <  1:438898/151‑1 (MQ=255)

                   aTTTCAACCACCAGCGCCCGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATCGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATc                                                                                                                             >  2:645634/1‑150 (MQ=255)

                    tttCAACCACCAGCGCCCGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCa                                                                                                                            >  1:427619/1‑150 (MQ=255)

                      tCAACCACCAGCGCCCGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCaa                                                                                                                           >  2:718220/1‑149 (MQ=255)

                        aaCCACCAGCGCCCGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGct                                                                                                                       <  1:191630/151‑1 (MQ=255)

                         accaccAGCGCCCGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGCAAGATAATCGCCTGAATCAAGGctt                                                                                                                      >  1:408373/1‑151 (MQ=255)

                           caccaGCGCCCGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGcttct                                                                                                                    <  1:230425/151‑1 (MQ=255)

                            accaGCGCCCGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGcttctt                                                                                                                   >  1:423258/1‑151 (MQ=255)

                            accaGCGCCCGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGcttctt                                                                                                                   >  2:1063117/1‑151 (MQ=255)

                                     cGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATg                                                                                                           >  1:125223/1‑150 (MQ=255)

                                     cGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGa                                                                                                          <  2:838783/151‑1 (MQ=255)

                                      gTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGa                                                                                                          >  1:552334/1‑150 (MQ=255)

                                      gTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGa                                                                                                          >  1:209606/1‑150 (MQ=255)

                                        tGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAAt                                                                                                       >  2:379404/1‑151 (MQ=255)

                                            cAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTg                                                                                                   <  2:1036940/151‑1 (MQ=255)

                                             aaaGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATgg                                                                                                     >  2:408980/1‑148 (MQ=255)

                                              aaGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGAt                                                                                                 >  1:66896/1‑151 (MQ=255)

                                              aaGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGAt                                                                                                 <  1:710147/151‑1 (MQ=255)

                                              aaGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGAGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGAt                                                                                                 <  1:211694/151‑1 (MQ=255)

                                                 gCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGAt                                                                                                 >  1:601092/1‑148 (MQ=255)

                                                 gCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGAt                                                                                                 >  2:847613/1‑148 (MQ=255)

                                                    tCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATagag                                                                                             <  1:509838/149‑1 (MQ=255)

                                                     cATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGt                                                                                          <  2:580215/151‑1 (MQ=255)

                                                     cATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGt                                                                                          <  2:443894/151‑1 (MQ=255)

                                                        gggTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTccc                                                                                       >  1:168896/1‑151 (MQ=255)

                                                        gggTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTccc                                                                                       >  2:788823/1‑151 (MQ=255)

                                                              gagagaCAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACt                                                                                 >  2:440179/1‑151 (MQ=255)

                                                               agagaCAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTa                                                                                <  2:427608/151‑1 (MQ=255)

                                                                gagaCAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTaa                                                                               <  1:764838/151‑1 (MQ=255)

                                                                     aaTGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGgcg                                                                          <  1:791236/151‑1 (MQ=255)

                                                                     aaTGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGgcg                                                                          <  1:947094/151‑1 (MQ=255)

                                                                           cTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCa                                                                        >  1:491354/1‑147 (MQ=255)

                                                                             cGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGAttt                                                                  >  2:381950/1‑151 (MQ=255)

                                                                             cGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGAttt                                                                  >  1:702715/1‑151 (MQ=255)

                                                                              gACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGAttt                                                                  >  1:286940/1‑150 (MQ=255)

                                                                                ccATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACa                                                               <  1:252185/151‑1 (MQ=255)

                                                                                 cATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTAc                                                                >  2:940088/1‑149 (MQ=255)

                                                                                  atatAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGa                                                             <  2:259172/151‑1 (MQ=255)

                                                                                    ataGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATg                                                           <  2:1034830/151‑1 (MQ=255)

                                                                                    ataGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATg                                                           >  1:626761/1‑151 (MQ=255)

                                                                                    ataGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATg                                                           <  1:775917/151‑1 (MQ=255)

                                                                                    ataGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATg                                                           <  2:694412/151‑1 (MQ=255)

                                                                                     taGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATgg                                                          >  2:653746/1‑151 (MQ=255)

                                                                                      aGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGc                                                         <  1:7712/151‑1 (MQ=255)

                                                                                             gAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATc                                                  >  2:107/1‑151 (MQ=255)

                                                                                               aaTGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGa                                                <  2:475231/151‑1 (MQ=255)

                                                                                               aaTGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGa                                                <  1:286974/151‑1 (MQ=255)

                                                                                                  gAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAgg                                              <  2:1035604/150‑1 (MQ=255)

                                                                                                    aTCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCAc                                           >  2:107830/1‑151 (MQ=255)

                                                                                                      cccTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTACTGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACtg                                         >  1:897096/1‑151 (MQ=255)

                                                                                                      cccTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTAGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACtg                                         >  2:920159/1‑151 (MQ=255)

                                                                                                       ccTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACtgt                                        <  1:868489/151‑1 (MQ=255)

                                                                                                        cTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACtgtg                                       >  2:522238/1‑151 (MQ=255)

                                                                                                          tCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACtgtg                                       <  2:548837/149‑1 (MQ=255)

                                                                                                           cAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGaaa                                    <  1:49172/151‑1 (MQ=255)

                                                                                                           cAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGaa                                     >  1:610604/1‑150 (MQ=255)

                                                                                                                 gTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCAtt                              >  2:220990/1‑151 (MQ=255)

                                                                                                                     ccGGAAACGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCt                          >  2:70718/1‑151 (MQ=255)

                                                                                                                           aCGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaaaa                    <  2:458401/151‑1 (MQ=255)

                                                                                                                           aCGGGCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGaaaaa                    <  1:202743/151‑1 (MQ=255)

                                                                                                                              ggCCAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGAAAAAAtc                 <  1:773320/151‑1 (MQ=255)

                                                                                                                                 cAGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGAAAAAAtctct              <  2:42779/151‑1 (MQ=255)

                                                                                                                                  aGCGCCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGAAAAAAtctctc             >  1:781936/1‑151 (MQ=255)

                                                                                                                                     gcCCTCTCCTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGAAAAAATCTCTCTgg          >  1:881197/1‑151 (MQ=255)

                                                                                                                                            ccTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGAAAAAATCTCTCTGGCAGCAtt   <  1:794548/151‑1 (MQ=255)

                                                                                                                                            ccTGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGAAAAAATCTCTCTGGCAGCAtt   >  2:316568/1‑151 (MQ=255)

                                                                                                                                              tGGCCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGAAAAAATCTCTCTGGCAGCATTg  >  1:36365/1‑150 (MQ=255)

ACGCATCCCTTCCGCCATAATTTCAACCACCAGCGCCCGTTGTCCAAAGGCTTCATGGGTGAGAGAGACAATGGACTCGACCATATAGTCAACGAAATGAATCCCTTCAATCGGTTCCCGGAAACGGGCCAGCGCCCTCTCCTGGTCCTGTAAGATAATCGCCTGAATCAAGGCTTCTTTGGAGATGAAATGGTGATAGAGCGTCCCGGGACTAATGGCGCAAGATTTACAGATGGCTTTCATCGAGGCACTGTGAAATCCATTTTCTGAAAAAATCTCTCTGGCAGCATTG  >  NC_000913/1696711‑1697002

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A