Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F50 I2 R1 150 68.2 2132745 98.7% 2105019 150.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,768,945 A→G intergenic (‑260/‑129) ydiJ ← / → ydiK putative FAD‑linked oxidoreductase/UPF0118 family inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,768,9450AG100.0% 205.7 / NA 57intergenic (‑260/‑129)ydiJ/ydiKputative FAD‑linked oxidoreductase/UPF0118 family inner membrane protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (27/30);  total (27/30)

CAGGAAGGCGGCAAGCGAGTGAACTCCAGGAGCTTACAATAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTC  >  NC_000913/1768797‑1769089
                                                                                                                                                    |                                                                                                                                                
cAGGAAGGCGGCAAGCGAGTGAACTCCAGGAGCTTACAATAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAAcgcg                                                                                                                                                >  1:321457/1‑151 (MQ=255)
cAGGAAGGCGGCAAGCGAGTGAACTCCAGGAGCTTACAATAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAAcgcg                                                                                                                                                <  2:871716/151‑1 (MQ=255)
 aGGAAGGCGGCAAGCGAGTGAACTCCAGGAGCTTACAATAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACgcgc                                                                                                                                               <  1:676780/151‑1 (MQ=255)
 aGGAAGGCGGCAAGCGAGTGAACTCCAGGAGCTTACAATAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACgcgc                                                                                                                                               >  1:728809/1‑151 (MQ=255)
                  gTGAACTCCAGGAGCTTACAATAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGc                                                                                                                              >  1:225/1‑151 (MQ=255)
                    gAACTCCAGGAGCTTACAATAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCa                                                                                                                             <  2:426640/150‑1 (MQ=255)
                     aaCTCCAGGAGCTTACAATAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGc                                                                                                                              >  1:159182/1‑148 (MQ=255)
                      aCTCCAGGAGCTTACAATAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGaa                                                                                                                          <  2:187633/151‑1 (MQ=255)
                          cAGGAGCTTACAATAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCgg                                                                                                                      <  1:953348/151‑1 (MQ=255)
                           aGGAGCTTACAATAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGc                                                                                                                     >  2:446866/1‑151 (MQ=255)
                                   aCAATAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTaa                                                                                                              >  1:80975/1‑150 (MQ=255)
                                   aCAATAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTaa                                                                                                              <  2:16524/150‑1 (MQ=255)
                                   aCAATAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTaa                                                                                                              <  2:46434/150‑1 (MQ=255)
                                     aaTAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTaaaaa                                                                                                           <  2:289287/151‑1 (MQ=255)
                                     aaTAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTaaaa                                                                                                            >  1:12669/1‑150 (MQ=255)
                                      aTAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAAc                                                                                                          >  1:341415/1‑151 (MQ=255)
                                        aGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAAcc                                                                                                         <  2:792315/150‑1 (MQ=255)
                                            aGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTg                                                                                                     >  2:349693/1‑150 (MQ=255)
                                             gTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGGAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGa                                                                                                    >  2:342876/1‑150 (MQ=255)
                                                 cTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTg                                                                                               >  1:742630/1‑151 (MQ=255)
                                                   ggggTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGc                                                                                              <  2:223756/150‑1 (MQ=255)
                                                          acgaacgTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCAtt                                                                                      <  1:212640/151‑1 (MQ=255)
                                                             aacgTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATg                                                                                   <  2:159177/151‑1 (MQ=255)
                                                                gTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAg                                                                                <  1:181554/151‑1 (MQ=255)
                                                                  aGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGt                                                                              <  2:612396/151‑1 (MQ=255)
                                                                     cGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTg                                                                             >  2:175836/1‑149 (MQ=255)
                                                                     cGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTg                                                                             >  2:128332/1‑149 (MQ=255)
                                                                         gcaCATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTc                                                                       <  2:872433/151‑1 (MQ=255)
                                                                          cacaTGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTcg                                                                      >  1:328816/1‑151 (MQ=255)
                                                                           acaTGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTcgc                                                                     >  2:678746/1‑151 (MQ=255)
                                                                            caTGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTcgcg                                                                    <  1:875029/151‑1 (MQ=255)
                                                                               gCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCgtgt                                                                 >  1:763464/1‑151 (MQ=255)
                                                                               gCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCgtg                                                                  <  1:287960/150‑1 (MQ=255)
                                                                               gCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCgtg                                                                  <  2:334846/150‑1 (MQ=255)
                                                                                       aaaTACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCAcgtcg                                                         <  2:491744/151‑1 (MQ=255)
                                                                                         aTACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCAcgtcgcg                                                       <  2:113883/151‑1 (MQ=255)
                                                                                           acgacgAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCAcgtcgcgt                                                      <  1:609325/150‑1 (MQ=255)
                                                                                             gacgaGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCAcgtcgcgtcg                                                    >  2:994096/1‑150 (MQ=255)
                                                                                               cgaGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTcgacg                                                 >  1:320176/1‑151 (MQ=255)
                                                                                                gaGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTcgacga                                                <  2:821878/151‑1 (MQ=255)
                                                                                                    aaaTCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTg                                            >  1:985700/1‑151 (MQ=255)
                                                                                                        cGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGc                                        >  2:482273/1‑151 (MQ=255)
                                                                                                           ttGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGcac                                      >  2:978540/1‑150 (MQ=255)
                                                                                                            tGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGcaca                                     >  1:9706/1‑150 (MQ=255)
                                                                                                             gCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACaaa                                   <  1:69755/151‑1 (MQ=255)
                                                                                                             gCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACaa                                    <  2:91159/150‑1 (MQ=255)
                                                                                                               gtgtTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACaaaa                                  >  1:375387/1‑150 (MQ=255)
                                                                                                                 gtTGCCTGAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAg                               <  1:276328/151‑1 (MQ=255)
                                                                                                                        gAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGaaa                         <  1:1036584/150‑1 (MQ=255)
                                                                                                                        gAGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGaaa                         <  2:623922/150‑1 (MQ=255)
                                                                                                                         aGTTGTTGTACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAag                       <  2:962648/151‑1 (MQ=255)
                                                                                                                            tgttgtACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAagta                     <  1:349704/150‑1 (MQ=255)
                                                                                                                             gttgtACCACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAagtagt                   <  1:731107/151‑1 (MQ=255)
                                                                                                                                   ccACATTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGt             >  1:203999/1‑151 (MQ=255)
                                                                                                                                    cacaTTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGt             >  2:881238/1‑150 (MQ=255)
                                                                                                                                    cacaTTTTTTTCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTa            <  2:574796/151‑1 (MQ=255)
                                                                                                                                         ttttttCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGt       >  1:461318/1‑151 (MQ=255)
                                                                                                                                          tttttCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGtt      >  1:458833/1‑151 (MQ=255)
                                                                                                                                           ttttCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTc     >  2:857391/1‑151 (MQ=255)
                                                                                                                                              tCTAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGt   <  1:383334/150‑1 (MQ=255)
                                                                                                                                                tAACGCGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTc  >  1:558282/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
CAGGAAGGCGGCAAGCGAGTGAACTCCAGGAGCTTACAATAGTAAGTGACTGGGGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTC  >  NC_000913/1768797‑1769089

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A