Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F50 I1 R1
|
157 |
93.7 |
2947622 |
98.1% |
2891617 |
150.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,768,998 |
T→C |
intergenic (‑313/‑76) |
ydiJ ← / → ydiK |
putative FAD‑linked oxidoreductase/UPF0118 family inner membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,768,998 | 0 | T | C | 99.1%
| 419.1
/ ‑4.3
| 107 | intergenic (‑313/‑76) | ydiJ/ydiK | putative FAD‑linked oxidoreductase/UPF0118 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (39/66); total (39/68) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.60e-01 |
Only 100 of 110 total aligned reads displayed.
GGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCGGTGCTGTTTTTAGCCATCATGAT > NC_000913/1768850‑1769144
|
ggTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCcca < 2:1060430/151‑1 (MQ=255)
gTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCccat < 2:19385/151‑1 (MQ=255)
gTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCccat < 2:814650/151‑1 (MQ=255)
gaacgTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTAt > 1:192406/1‑151 (MQ=255)
gaacgTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTAt < 2:14954/151‑1 (MQ=255)
acgTAACAGCAGCACATGAAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATg > 2:599792/1‑150 (MQ=255)
ccGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGa < 1:286192/151‑1 (MQ=255)
cagcaCATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGtt > 2:737073/1‑151 (MQ=255)
agcaCATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGttt < 2:1438325/151‑1 (MQ=255)
agcaCATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGttt > 2:823972/1‑151 (MQ=255)
gcaCATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTc > 2:677132/1‑151 (MQ=255)
caTGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTcgcg < 2:1081215/151‑1 (MQ=255)
tGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCgtg > 1:1145259/1‑151 (MQ=255)
tGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCAcg < 1:1178644/150‑1 (MQ=255)
aaaTACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCAcgtcg > 2:740587/1‑151 (MQ=255)
aaaTACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCAcgtcg < 2:909946/151‑1 (MQ=255)
aaaTACAACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCAcgtcg > 2:785415/1‑151 (MQ=255)
aaTACGACGAGTAAATCGTTTGCGTGTTGCGTGAGTTGTTGTGCCGCATTTTTTTCTAGCGCGCGGATCAGAATTAAGGGCAGGATGGGCCTGTTAAAAGCCGCTGAAAGGGCGCATGATTATGCAGGTGAGTGGGGCGTGTTCAcgtcg < 2:895474/150‑1 (MQ=255)
aaTACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCAcgtcgc < 2:717490/151‑1 (MQ=255)
aTACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCAcgtcgcg < 2:1397962/151‑1 (MQ=255)
acgacgAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCAcgtcgcgt < 1:67964/150‑1 (MQ=255)
cgacgaGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCAcgtcgcgtca < 2:1008168/151‑2 (MQ=255)
acgaGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTcgac < 2:340692/151‑1 (MQ=255)
gaGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTcgacg > 1:1327811/1‑150 (MQ=255)
gaGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTcgacg > 1:476764/1‑150 (MQ=255)
aGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGAt < 2:1416760/151‑1 (MQ=255)
aGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGAt < 2:582839/151‑1 (MQ=255)
aGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTCCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGAt < 1:1187890/151‑1 (MQ=255)
gTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGAtt > 2:474766/1‑151 (MQ=255)
tAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGAttt > 2:609794/1‑151 (MQ=255)
aaaTCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGAttt < 1:917687/150‑1 (MQ=255)
aaaTCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGAttt < 2:172707/150‑1 (MQ=255)
aaaTCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTg < 1:368224/151‑1 (MQ=255)
aaTCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGa < 1:1182315/151‑1 (MQ=255)
aTCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGAc < 1:1348059/151‑1 (MQ=255)
tCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACg > 2:228775/1‑151 (MQ=255)
cGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGc > 1:1034335/1‑151 (MQ=255)
cGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGc < 2:1177761/151‑1 (MQ=255)
gCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACaaa < 2:865599/151‑1 (MQ=255)
cGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACaaaa < 1:3113/151‑1 (MQ=255)
cGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACaaa > 2:1421256/1‑150 (MQ=255)
cGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACaaa > 1:1458768/1‑150 (MQ=255)
tgtTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACaaaaa > 2:710241/1‑150 (MQ=255)
gtTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAg < 1:67361/151‑1 (MQ=255)
gtTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAg < 1:355685/151‑1 (MQ=255)
ttGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAg > 2:634353/1‑150 (MQ=255)
gCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTg < 1:789377/151‑1 (MQ=255)
cTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGa > 2:120589/1‑150 (MQ=255)
tGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGaa > 2:1125973/1‑150 (MQ=255)
gAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGaaa > 2:1045434/1‑150 (MQ=255)
gAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTACGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGaa < 1:1314858/149‑1 (MQ=255)
gttgttGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAag > 2:549441/1‑150 (MQ=255)
gttgtACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAagtagt < 2:192382/151‑1 (MQ=255)
gttgtACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAagtag < 2:160684/150‑1 (MQ=255)
tgtACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGtt < 1:1377394/150‑1 (MQ=255)
tgtACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGtt < 2:1297229/150‑1 (MQ=255)
tgtACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGtt < 2:35366/150‑1 (MQ=255)
aCCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATg < 2:1187847/150‑1 (MQ=255)
acaTTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTaa < 1:107893/151‑1 (MQ=255)
aTTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAAt > 1:1203815/1‑151 (MQ=255)
aTTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAAt < 2:183865/151‑1 (MQ=255)
ttttttCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATg < 2:641199/150‑1 (MQ=255)
tttttCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGt < 1:237551/150‑1 (MQ=255)
tttttCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGt < 2:1080894/150‑1 (MQ=255)
aaCACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCa < 2:191819/149‑1 (MQ=255)
acacGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGcc > 1:1257556/1‑151 (MQ=255)
acGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCa < 2:951721/151‑1 (MQ=255)
ccATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAggg > 1:1177732/1‑150 (MQ=255)
cATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAATATGTGAAAAGTGGTTATGGTAAATGTTCGTCAGCCCAGGGAt > 1:669157/1‑151 (MQ=255)
cATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGAGAt < 2:73101/151‑1 (MQ=255)
aTCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATg > 1:889392/1‑151 (MQ=255)
cAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTc < 1:641918/151‑1 (MQ=255)
aGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTca < 2:589478/151‑2 (MQ=255)
aGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCg > 2:1047801/1‑151 (MQ=255)
aaTTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGc > 1:305552/1‑150 (MQ=255)
aTTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGcac < 2:340027/151‑1 (MQ=255)
tAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGcaca > 2:1275357/1‑150 (MQ=255)
aaGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACaa < 1:488230/150‑1 (MQ=255)
gCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAAtt > 2:810045/1‑149 (MQ=255)
gCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAAtt < 1:810123/149‑1 (MQ=255)
gCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCt < 2:1458661/151‑1 (MQ=255)
cAGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTg < 2:556186/151‑1 (MQ=255)
aGAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGc > 2:598833/1‑151 (MQ=255)
gAATCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCt > 1:612433/1‑151 (MQ=255)
aTCGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCttt < 2:175024/151‑1 (MQ=255)
cGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTc < 2:678115/150‑1 (MQ=255)
cGGCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCg < 1:626892/151‑1 (MQ=255)
ggCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCgg > 2:7939/1‑151 (MQ=255)
ggCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCg < 2:1327703/150‑1 (MQ=255)
gCCTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCGGt > 1:274145/1‑151 (MQ=255)
ccTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCGGTg > 2:1429293/1‑151 (MQ=255)
ccTGTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCGGTg < 2:809207/151‑1 (MQ=255)
gTTAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCGGTGCTg > 1:1456156/1‑151 (MQ=255)
ttAAAAACCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCGGTGCt < 1:1160409/149‑1 (MQ=255)
aaaaaCCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCGGTGCTGttt < 1:677205/151‑1 (MQ=255)
aaaCCGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCGGTGCTGttttt < 1:740666/151‑1 (MQ=255)
ccGCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCGGTGCTGTTTTTAGc < 1:518382/151‑1 (MQ=255)
gCTGAAATTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCGGTGCTGTTTTTAGCca < 1:1098611/151‑1 (MQ=255)
aaaTTGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCGGTGCTGTTTTTAGCcatcat < 1:257840/151‑1 (MQ=255)
ttGCCCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCGGTGCTGTTTTTAGCCATCATGAt > 1:246411/1‑151 (MQ=255)
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GGTGAACGAACGTAGCCGCAGCACATGCAACTTGAAATACGACGAGTAAATCGTTTGCGTGTTGCCTGAGTTGTTGTACCACATTTTTTTCTAACACGCCCATCAGAATTAAGGGCAGAATCGGCCTGTTAAAAACCGCTGAAATTGCTCATCATTATGCAGGTGAGTTTCGCGTGTTCACGTCGCGTCGACGATTTGACGCACAAAAAAGGTGAAAAGTAGTTATGGTAAATGTTCGTCAGCCCAGGGATGTCGCACAAATTCTGCTTTCGGTGCTGTTTTTAGCCATCATGAT > NC_000913/1768850‑1769144
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
