Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F50 I1 R1
|
121 |
119.5 |
3777739 |
97.6% |
3687073 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,068,545 |
A→G |
V432A (GTT→GCT) |
rutG ← |
pyrimidine permease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,068,545 | 0 | A | G | 100.0%
| 337.6
/ NA
| 99 | V432A (GTT→GCT) | rutG | pyrimidine permease |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (50/49); total (50/49) |
TATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTACTGCGACCATAATCAAATTA > NC_000913/1068398‑1068691
|
tatTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGGGGAGCg > 2:343198/1‑150 (MQ=255)
tGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTca > 2:12845/1‑150 (MQ=255)
tttGCACTTTTTTGTAGGCCGGATAAGGCGTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTcaacca < 3:322530/150‑1 (MQ=255)
tttGCACTGTTTTGTAGGCCGGATAAGGCGTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTcaacc > 3:1328570/1‑149 (MQ=255)
tttGCACTGTTTTGTAGGCCGGATAAGGCGTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCCCCTGATGAACAACTTCTGGCGGTGGAGCGGcaacc > 3:1367083/1‑149 (MQ=255)
ttGCACTGTTTTGTAGGCCGGATAAGGCGTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTcaaccaa < 3:233052/150‑1 (MQ=255)
cACTGTTTTGTAGGCCGGATAAGGCGTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCCACCAAAttt > 2:806663/1‑151 (MQ=255)
ttttttGTAGCCGGAATAGGGCGTTT‑GCGCCGCATCCGGAAAAAACAATGCGTACGTTGTCAAAACTCTGCCCCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTcaaccaac < 2:113551/143‑1 (MQ=255)
ttttGTAGGCCGGATAAGGCGTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCt > 1:220290/1‑151 (MQ=255)
ttttGTAGGCCGGATAAGGCGTTT‑ACGCCGCATCCGGCATGAACAAGGCGTACGTTGTAAACAATCGGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTc < 2:734519/147‑1 (MQ=255)
tGTAGGCGGGATAAGGCGTTT‑CCGCCACATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTa < 2:1100780/150‑1 (MQ=255)
gaaGGCAGGATAA‑GCGTTTAACGCCACATCCGGCATAAAAAAGGCTAACGTTATCAACAATCTGAACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTa < 2:816401/147‑1 (MQ=255)
ggCCGGATAAGGCGTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGACAACCAACTTTCTGCTTaacaa < 1:366107/150‑1 (MQ=255)
cGGATAAGGCGTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGc > 4:168779/1‑150 (MQ=255)
ggATAAGGCGTTT‑CCGCCGCATCCGGCATGAACAATGCGTCCGTTGTCAACAATCTCCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCa < 3:82682/150‑1 (MQ=255)
ggATAAGGCGTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCAt > 2:367798/1‑151 (MQ=255)
ggATAAGGCGTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGGGGAGCGTCAACCAACTTTCTGCTTAACAACGc > 3:1342279/1‑149 (MQ=255)
ggATAAGGCGTTT‑ACGCCGCATCCGGCATGAAAAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACg < 2:840362/148‑1 (MQ=255)
aTAAGGCGTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAAAAACGCAtt > 4:283962/1‑150 (MQ=255)
aaGGCGTTT‑CCGCCGCATCCGGAATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAg < 2:211525/151‑1 (MQ=255)
aaGGCGTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACTATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTg > 2:1324632/1‑149 (MQ=255)
gTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGGGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTaaa > 3:1377894/1‑150 (MQ=255)
gTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTaaa > 4:11114/1‑150 (MQ=255)
ttt‑ACGCCGCGTCCGGCATGAACATGGCGTACGTTGTCAACATTCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTaaa < 2:830277/149‑1 (MQ=255)
ttt‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTaaaa > 2:1190490/1‑150 (MQ=255)
tt‑ACGCCGCAGCCGGCATAAACAATGCTTACTTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAAt < 2:1302496/150‑1 (MQ=255)
t‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATcg > 2:22715/1‑151 (MQ=255)
tccgccgcACCCGGCATGAACAATGCGTACTTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATc < 2:1327175/148‑1 (MQ=255)
cgccgcATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATcgc > 4:182108/1‑150 (MQ=255)
cgccgcACCCGGAATGAAAAATGCGTACGTTGTCAACAATCGGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATcg < 1:270781/149‑1 (MQ=255)
ccgcATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATcgcg < 3:281450/149‑1 (MQ=255)
ccgcATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGcc < 1:168782/151‑1 (MQ=255)
ccgcACCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATcgcg < 1:351395/149‑1 (MQ=255)
cgcATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGcc > 3:781124/1‑150 (MQ=255)
cgcATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCGCCTGATGAACAACTTCTGGCGGGGGAGGGTCAACCAACTTTCTGCTTAACAACGCATTGGGTAAAATCGCGcc > 3:180806/1‑150 (MQ=255)
cATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCaa > 4:462364/1‑150 (MQ=255)
cATCCGCCATAAACAATGCGTACTTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCaa < 3:1304382/150‑1 (MQ=255)
ccGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAgg > 2:1397211/1‑150 (MQ=255)
ccGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGt < 3:680591/151‑1 (MQ=255)
ccGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAAATTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAgg > 3:636600/1‑150 (MQ=255)
ggCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTg < 2:242984/151‑1 (MQ=255)
ggCATGAACAATGCGTACGTTGTCAACAATCGGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTg < 3:226448/151‑1 (MQ=255)
cATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCt > 1:453684/1‑151 (MQ=255)
aaaaaTGCTTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTa < 3:22720/147‑1 (MQ=255)
aaTGCGTCCGTTGTCAACAATCGGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCa < 2:1367014/150‑1 (MQ=255)
aaTGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGGGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCa > 2:696047/1‑150 (MQ=255)
aaTGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCa > 2:237943/1‑150 (MQ=255)
aTGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAAt < 1:93275/151‑1 (MQ=255)
gCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTCTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAAACCACTTTCTGCTTAAAAAAGCATTGCGGAAAATCGAGCCAAAGGTTGCTGTACCCAt > 2:730563/1‑149 (MQ=255)
gTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAAtccc < 3:246398/150‑1 (MQ=255)
gTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAAtccc > 3:894151/1‑150 (MQ=255)
aCGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAAtccctc < 2:1373745/150‑1 (MQ=255)
cGTGGTCAACAATCGCCCCCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAAtccctc < 3:1326575/149‑1 (MQ=255)
ttGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGGTGAACAACTTCTGGCGGGGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCa > 4:336912/1‑150 (MQ=255)
ttGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAAtccctccc < 1:423927/149‑1 (MQ=255)
ttGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAAtccctccc < 2:726335/149‑1 (MQ=255)
gTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAAACAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCaa > 4:155758/1‑149 (MQ=255)
caacaaTCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGGTGCTGTACCAATCCCTCCCAACg > 3:508977/1‑149 (MQ=255)
aacaaTCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTa < 3:12849/150‑1 (MQ=255)
aacaaGCTGAGCCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCaa < 1:308267/146‑1 (MQ=255)
acaaTCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTaa > 1:224876/1‑150 (MQ=255)
aaTCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGCACAACTTCTGGCGGTGGGGCGTCAACCCACTTTCTGCTTAACAAAGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCCAACCCTCCCAACGTaaaa > 4:128430/1‑150 (MQ=255)
aTCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAAcc > 3:373139/1‑151 (MQ=255)
aTCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAAcc > 3:1216122/1‑151 (MQ=255)
tGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGGTGCTGTACCAATCCCTCCCAACGTAAAACCGcc > 2:1091532/1‑151 (MQ=255)
cACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGccc < 2:1089646/150‑1 (MQ=255)
aCCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCa < 2:197987/150‑1 (MQ=255)
ccgccgGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCa > 3:550419/1‑149 (MQ=255)
ccgccgGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGc < 3:686432/151‑1 (MQ=255)
gccgGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGt > 1:371423/1‑151 (MQ=255)
cgGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGGGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTg > 2:772482/1‑150 (MQ=255)
cccGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCaaa < 3:293031/151‑1 (MQ=255)
ccGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCaaaa < 3:1059312/151‑1 (MQ=255)
ggcggTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATc > 3:1180754/1‑151 (MQ=255)
gTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCAccc > 3:877871/1‑151 (MQ=255)
ttCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCcgc < 1:7694/150‑1 (MQ=255)
tGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGccc > 3:1076286/1‑151 (MQ=255)
ttATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAg < 2:361590/150‑1 (MQ=255)
ttATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAg < 2:291985/150‑1 (MQ=255)
ttATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGc > 2:472098/1‑151 (MQ=255)
tATGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGc > 2:797969/1‑150 (MQ=255)
aTGGCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCAc > 2:248919/1‑151 (MQ=255)
ggCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACt > 3:681317/1‑150 (MQ=255)
ggCTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTa < 1:209238/151‑1 (MQ=255)
cTCCTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTa > 1:47585/1‑149 (MQ=255)
ccTGATGAACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGt < 3:806698/151‑1 (MQ=255)
tgatgaACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGtt > 4:298254/1‑150 (MQ=255)
gatgaACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTa < 2:504190/150‑1 (MQ=255)
atgaACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTACt > 2:330297/1‑151 (MQ=255)
gaACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTACTg < 3:367830/150‑1 (MQ=255)
gaACAACTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTACTGc > 2:422073/1‑151 (MQ=255)
aacTTCTGGCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTACTGCGAcc > 3:1260903/1‑151 (MQ=255)
ggCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTACTGCGACCATaa < 2:825466/148‑1 (MQ=255)
ggCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTACTGCGACCATAAt < 3:1397282/149‑1 (MQ=255)
ggCGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTACTGCGACCATAATCa < 2:1328499/151‑1 (MQ=255)
cGGTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTACTGCGACCATAATCaaa < 3:1324702/151‑1 (MQ=255)
gTGGAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTACTGCGACCATAATCAAAtt > 1:177591/1‑151 (MQ=255)
ggAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTACTGCGACCATAATCAAATTa < 2:921559/150‑1 (MQ=255)
ggAGCGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTACTGCGACCATAATCAAATTa < 3:1190547/150‑1 (MQ=255)
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TATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTT‑ACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAATCGCGCCAAAGGTTGCTGTACCAATCCCTCCCAACGTAAAACCGCCCAGCGTGAGAGCAAAATCACCCGCGCCCAGCACTAAGGTTACTGCGACCATAATCAAATTA > NC_000913/1068398‑1068691
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
