Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F50 I1 R1
|
121 |
119.5 |
3777739 |
97.6% |
3687073 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,639,617 |
T→C |
G147G (GGA→GGG) |
rrrQ ← |
Qin prophage; putative lysozyme |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,639,617 | 0 | T | C | 99.2%
| 434.5
/ ‑4.5
| 119 | G147G (GGA→GGG) | rrrQ | Qin prophage; putative lysozyme |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (67/51); total (67/52) |
| Fisher's exact test for biased strand distribution p-value = 4.37e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 |
Only 100 of 121 total aligned reads displayed.
ACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGTCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTGGTTCG > NC_000913/1639469‑1639764
|
aCATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGccc < 2:1178188/151‑1 (MQ=255)
cATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCg > 1:199561/1‑151 (MQ=255)
tCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCa < 2:1040860/150‑1 (MQ=255)
ccGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATACACTGTTCTATCCCCCAGAAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCaac > 3:195523/1‑149 (MQ=255)
cgacgaTAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATcc > 3:1110002/1‑151 (MQ=255)
cgaTAAATCCTGACAACACGAGAAAAATCGCCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCtt < 3:1070209/150‑1 (MQ=255)
gaTAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTa > 3:759256/1‑150 (MQ=255)
gaTAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTa > 1:346757/1‑150 (MQ=255)
aaaTCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATcc < 2:768501/151‑1 (MQ=255)
ccTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATccacc > 2:589766/1‑150 (MQ=255)
tGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGc > 3:626807/1‑151 (MQ=255)
aacaCGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAAt < 1:189693/151‑1 (MQ=255)
aacaCGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAAt < 3:314903/151‑1 (MQ=255)
cacGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCg < 2:438845/151‑1 (MQ=255)
gaAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCg > 2:1182327/1‑151 (MQ=255)
aaaaTCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGc > 3:1368363/1‑150 (MQ=255)
aaaaTCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGc > 3:807288/1‑150 (MQ=255)
aaaaTCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCa < 2:626781/151‑1 (MQ=255)
aTCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGc > 3:1120816/1‑151 (MQ=255)
tCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGc > 3:1397210/1‑150 (MQ=255)
cACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCAc < 3:1246723/151‑1 (MQ=255)
ccATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCt > 4:16277/1‑151 (MQ=255)
cATGAATATCTTATGCACTGGTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCtt < 3:1060410/151‑1 (MQ=255)
cATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCtt < 3:861192/151‑1 (MQ=255)
gAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTa < 3:1210126/150‑1 (MQ=255)
gAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTAc > 2:1088403/1‑151 (MQ=255)
gAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTAc > 2:652783/1‑151 (MQ=255)
aaTATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACg > 3:688690/1‑151 (MQ=255)
aaTATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACg > 2:962307/1‑151 (MQ=255)
tatCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGAt > 3:822331/1‑151 (MQ=255)
atCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTTACATTTATTTGAACGAACGCGGCAACCGCGTCCGCCATCCTTAATCCACCACCTAACCCCTTCGCATGCCCCTTCACGac < 3:659033/150‑2 (MQ=255)
atCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATc > 4:468845/1‑151 (MQ=255)
cTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCAc > 2:565440/1‑151 (MQ=255)
tCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGCCGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGc < 3:775348/150‑1 (MQ=255)
tCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGc > 2:221837/1‑150 (MQ=255)
cACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCa < 4:427185/150‑1 (MQ=255)
cACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCAt < 2:157448/151‑1 (MQ=255)
tGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTc > 3:1014926/1‑150 (MQ=255)
tCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGc < 3:957996/150‑1 (MQ=255)
cccccAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTta < 3:1208980/151‑1 (MQ=255)
agcagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATaaa > 1:363227/1‑150 (MQ=255)
gcagGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAAc > 1:266231/1‑151 (MQ=255)
cagGTTCGTGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACg < 2:266444/151‑1 (MQ=255)
agGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGt < 2:163853/151‑1 (MQ=255)
ttAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCg > 3:386501/1‑150 (MQ=255)
gcgcTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACggg > 2:597500/1‑150 (MQ=255)
cgcTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGa > 1:344660/1‑150 (MQ=255)
ctctCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCa > 1:236095/1‑124 (MQ=255)
ctctCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCa < 4:236092/124‑1 (MQ=255)
ctctCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGaaa > 4:435247/1‑150 (MQ=255)
tctcCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAAc > 2:1064696/1‑137 (MQ=255)
tctcCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAAc < 3:1064742/137‑1 (MQ=255)
cTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACtt > 3:132782/1‑150 (MQ=255)
tGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTAc > 3:680710/1‑151 (MQ=255)
ggTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTAcc < 4:26039/151‑1 (MQ=255)
cACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCggg > 3:640212/1‑151 (MQ=255)
cACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCggg < 3:387437/151‑1 (MQ=255)
gacgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGcc < 2:807253/151‑1 (MQ=255)
acgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCa < 2:822296/151‑1 (MQ=255)
acgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCa < 1:350724/151‑1 (MQ=255)
cgaATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCa > 2:256296/1‑150 (MQ=255)
tAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGtt > 1:170333/1‑151 (MQ=255)
aaCCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGtt > 1:64443/1‑150 (MQ=255)
gACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAggg > 3:935206/1‑151 (MQ=255)
gACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAggg > 4:13925/1‑151 (MQ=255)
ccGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGa < 4:160787/150‑1 (MQ=255)
ccGTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGAc > 2:349881/1‑151 (MQ=255)
gTAACAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACaa < 3:245252/151‑1 (MQ=255)
cAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATg > 1:246421/1‑151 (MQ=255)
cAGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATg > 4:287381/1‑151 (MQ=255)
aGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAAt < 2:367393/149‑1 (MQ=255)
aGTTATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGa < 3:1315725/151‑1 (MQ=255)
ttATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGAcg > 3:171628/1‑151 (MQ=255)
ttATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGAcg > 2:534888/1‑151 (MQ=255)
tATTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGAcg < 3:1026887/150‑1 (MQ=255)
aTTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGAcgcg > 3:23147/1‑151 (MQ=255)
aTTTGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGAcgcg < 2:1397139/151‑1 (MQ=255)
tttGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGAcgcg > 3:1398316/1‑150 (MQ=255)
ttGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGAt > 2:388704/1‑151 (MQ=255)
tGAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGAt < 2:935170/150‑1 (MQ=255)
gAACGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATa < 2:225148/150‑1 (MQ=255)
aaCGAATGCGGCAATCGCGCCCGCCAACCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATAcc < 2:195494/151‑1 (MQ=255)
aCGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATAccc > 3:180764/1‑151 (MQ=255)
aCGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATAccc > 2:118436/1‑151 (MQ=255)
cGAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCg > 2:785510/1‑151 (MQ=255)
gAATGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGc > 2:632077/1‑151 (MQ=255)
aaTGCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCACATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCt > 2:297217/1‑151 (MQ=255)
gCGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCtttt < 1:82487/151‑1 (MQ=255)
cGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCttttt < 2:576798/151‑1 (MQ=255)
cGGCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCttttt > 4:35610/1‑151 (MQ=255)
gCAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCttttt < 2:1368294/149‑1 (MQ=255)
cAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTtgtg < 2:816390/151‑1 (MQ=255)
cAATCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTtgtg < 3:340311/151‑1 (MQ=255)
aaTCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTgg > 3:1265873/1‑151 (MQ=255)
aaTCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTgg > 2:1182593/1‑151 (MQ=255)
aTCGCGCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTGGt > 2:898846/1‑151 (MQ=255)
cgcgCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTGGtt < 4:368084/150‑1 (MQ=255)
cgcgCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTGGTTc < 2:688665/151‑1 (MQ=255)
cgcgCCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTGGTTc < 4:416557/151‑1 (MQ=255)
gcgcCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTGGTTCg > 2:1203920/1‑151 (MQ=255)
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ACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGACGAATAACCTGACCGTAACAGTTATTTGAACGAATGCGGCAATCGCGTCCGCCATCCTTAATCCACCAGCGAATCGCTTCGCATGCACCTTTACGATCACCAGCATTCAGCCGCTTATAAAACGTCGACGGGAAACACTTACCGGGGCCAATGTTATAGGGACAAAATGACGCGATACCCGCTTTTTGTGGTTCG > NC_000913/1639469‑1639764
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
