Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F50 I1 R1
|
121 |
119.5 |
3777739 |
97.6% |
3687073 |
150.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,805,473 |
A→G |
L204P (CTG→CCG) |
ydiY ← |
acid‑inducible putative outer membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,805,473 | 0 | A | G | 100.0%
| 309.0
/ NA
| 84 | L204P (CTG→CCG) | ydiY | acid‑inducible putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (43/41); total (43/41) |
ACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGG > NC_000913/1805327‑1805618
|
aCATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGt > 1:54966/1‑151 (MQ=255)
gTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCt > 2:180497/1‑151 (MQ=255)
aGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCtt < 4:291321/150‑1 (MQ=255)
cccAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCcg > 1:397151/1‑151 (MQ=255)
ccAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCcg > 2:1203257/1‑150 (MQ=255)
cAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCcgcg > 3:440216/1‑151 (MQ=255)
aGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCgcgc > 3:139709/1‑151 (MQ=255)
gATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCa > 2:223768/1‑150 (MQ=255)
aTAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCaa > 3:741806/1‑150 (MQ=255)
aaGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAg < 3:1339179/150‑1 (MQ=255)
aaGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAg < 3:605125/150‑1 (MQ=255)
aaGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGa < 2:296520/151‑1 (MQ=255)
ggTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGAcc < 2:552563/151‑1 (MQ=255)
gTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCg < 1:173271/151‑1 (MQ=255)
tGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGa < 2:978459/150‑1 (MQ=255)
ccGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAaca < 2:227106/151‑1 (MQ=255)
aCGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACAccc > 2:1210232/1‑151 (MQ=255)
ggtcggtATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCAGTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCGGCCGCGCCAAGGACCGAAACGCCCTg < 3:1004593/151‑1 (MQ=255)
ggtATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTa < 2:524176/151‑1 (MQ=255)
ttCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAAttt > 2:740119/1‑150 (MQ=255)
tCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAAttt > 3:378847/1‑149 (MQ=255)
tCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTa < 2:457668/150‑1 (MQ=255)
cGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCg < 2:266754/151‑1 (MQ=255)
gTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGtt < 4:252942/151‑1 (MQ=255)
gCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTg < 3:384613/150‑1 (MQ=255)
cAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTgtc > 3:202661/1‑151 (MQ=255)
aaGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCATAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTACGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTgt > 3:531064/2‑150 (MQ=255)
aGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTgtca < 2:139692/151‑1 (MQ=255)
aCTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTgtcagt > 1:471857/1‑151 (MQ=255)
ctctGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTgtcagtc > 4:79801/1‑151 (MQ=255)
ctctGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTgtcagt < 2:471125/150‑1 (MQ=255)
ctGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTgtcagtca > 2:308593/1‑150 (MQ=255)
ctGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTgtcagtca > 3:738785/1‑150 (MQ=255)
ggAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCaa < 3:780139/149‑1 (MQ=255)
aGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGc > 1:30057/1‑151 (MQ=255)
cAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGc > 4:157860/1‑151 (MQ=255)
gagTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCAt > 3:635508/1‑151 (MQ=255)
agTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCAt > 2:626089/1‑150 (MQ=255)
gTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATaa < 3:1008955/151‑1 (MQ=255)
ccATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGc < 2:460641/150‑1 (MQ=255)
gtgACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCgg < 2:140927/151‑1 (MQ=255)
tgACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGccc > 3:1218768/1‑147 (MQ=255)
gACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCgg > 3:868221/1‑149 (MQ=255)
gACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGa < 2:157215/150‑1 (MQ=255)
gACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAg < 3:1220007/151‑1 (MQ=255)
aCGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAgg < 3:843606/151‑1 (MQ=255)
gCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCa < 3:514867/151‑1 (MQ=255)
cACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGc > 2:853315/1‑151 (MQ=255)
cACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGc > 1:201151/1‑151 (MQ=255)
cTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGc > 3:565595/1‑151 (MQ=255)
ttCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGc > 2:65034/1‑150 (MQ=255)
tCAGTCCAAAATGTTCATTAATAGCAACAGTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACGCCCTGCGTAAATTTAGCGTTGTCAGTGAACTGCCATTCATAAGCCCCGGAGGCATAGCCCAGCGGCt < 3:1268774/150‑1 (MQ=255)
cAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTg < 3:223793/150‑1 (MQ=255)
aGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTggg > 2:1112989/1‑151 (MQ=255)
aGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTggg > 3:1270698/1‑151 (MQ=255)
gTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGt < 1:184554/151‑1 (MQ=255)
ccAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGtt < 1:467500/150‑1 (MQ=255)
aaaTGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCAc > 3:992738/1‑151 (MQ=255)
gTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTgg < 1:314767/150‑1 (MQ=255)
ttCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGc > 2:1162039/1‑150 (MQ=255)
cATTAATAGCAACATTTAATGCTCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCTTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCAt < 1:462771/150‑1 (MQ=255)
aTTAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTg < 3:865449/151‑1 (MQ=255)
ttAATAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGt > 2:908711/1‑151 (MQ=255)
aaTAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTc < 3:740150/150‑1 (MQ=255)
aaTAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCg > 2:95423/1‑151 (MQ=255)
tAGCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCgg > 2:624074/1‑150 (MQ=255)
gCAACATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGtat > 3:406051/1‑151 (MQ=255)
aaCATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCGTGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTatat < 2:1203818/151‑1 (MQ=255)
aaCATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTatat > 4:28462/1‑151 (MQ=255)
aCATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATAtt < 2:525127/151‑1 (MQ=255)
cATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATAttt > 2:644191/1‑151 (MQ=255)
cATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATAttt < 3:65045/151‑1 (MQ=255)
cATTTAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATAttt < 2:250766/151‑1 (MQ=255)
aTTTAATGCGCTTTCGGAGTCCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATAttt > 3:949915/1‑150 (MQ=255)
tttAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGt > 3:1198388/1‑151 (MQ=255)
tAATGCGCTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTc < 2:580337/150‑1 (MQ=255)
cTTTCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGc > 3:160563/1‑150 (MQ=255)
tttCGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGcac > 2:1092216/1‑151 (MQ=255)
ttCAGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACGCCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGca < 3:431425/149‑1 (MQ=255)
cGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACAcc > 2:1275190/1‑151 (MQ=255)
cGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACAcc > 3:1010063/1‑151 (MQ=255)
cGGAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATGTGTCGTAACGCacac < 4:35246/150‑1 (MQ=255)
gAGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTg < 2:440182/151‑1 (MQ=255)
aGTTCGGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTgg < 2:841386/151‑1 (MQ=255)
|
ACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGG > NC_000913/1805327‑1805618
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
