Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A3 F50 I3 R1	160	117.2	4331776	85.4%	3699336	149.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	724,758	T→C	E74E (GAA→GAG)	kdpC ←	potassium translocating ATPase, subunit C

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	724,758	0	T	C	100.0%	418.5 / NA	106	E74E (GAA→GAG)	kdpC	potassium translocating ATPase, subunit C
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (52/54); total (52/54)

Only 100 of 107 total aligned reads displayed.

ATGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATTTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTC  >  NC_000913/724610‑724905

aTGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCAtctc                                                                                                                                                   >  4:1170703/1‑151 (MQ=255)

  gCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTg                                                                                                                                                 >  4:1079609/1‑151 (MQ=255)

  gCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTg                                                                                                                                                 >  1:63684/1‑151 (MQ=255)

          cAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGcc                                                                                                                                         <  4:290597/151‑1 (MQ=255)

           aGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGcc                                                                                                                                         <  4:1643121/150‑1 (MQ=255)

           aGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCg                                                                                                                                        >  4:650474/1‑151 (MQ=255)

            gTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCg                                                                                                                                        >  2:873502/1‑150 (MQ=255)

            gTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGa                                                                                                                                       <  2:1205291/151‑1 (MQ=255)

              tCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGAc                                                                                                                                      <  4:646588/150‑1 (MQ=255)

               cAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACg                                                                                                                                     <  4:818154/150‑1 (MQ=255)

               cAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACg                                                                                                                                     <  4:305838/150‑1 (MQ=255)

                aaCCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGAc                                                                                                                                      <  3:63688/148‑1 (MQ=255)

                aaCCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACggg                                                                                                                                   <  3:152071/151‑1 (MQ=255)

                aaCCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACg                                                                                                                                     <  4:576426/149‑1 (MQ=255)

                  ccGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCg                                                                                                                                 <  4:100717/151‑1 (MQ=255)

                  ccGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCg                                                                                                                                 >  2:400679/1‑151 (MQ=255)

                   cGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGa                                                                                                                                <  2:965068/151‑1 (MQ=255)

                     gAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGAcc                                                                                                                              >  2:541330/1‑151 (MQ=255)

                     gAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGAcc                                                                                                                              <  2:98173/151‑1 (MQ=255)

                           tCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGaa                                                                                                                         >  4:1454007/1‑150 (MQ=255)

                            cgcgCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGaaaa                                                                                                                       <  1:310969/151‑1 (MQ=255)

                            cgcgCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGaaa                                                                                                                        >  2:1608120/1‑150 (MQ=255)

                            cgcgCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGaa                                                                                                                         <  2:443025/149‑1 (MQ=255)

                              cgcTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTACCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAAt                                                                                                                      >  4:1145962/1‑150 (MQ=255)

                                  ggCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCg                                                                                                                 >  4:399021/1‑151 (MQ=255)

                                    cATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGTTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGACGTTGCCGACGGGCGACCATGAAAATAGCCGtg                                                                                                               <  4:1093604/151‑2 (MQ=255)

                                    cATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGtt                                                                                                               <  2:1159749/151‑1 (MQ=255)

                                     aTCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCACCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTg                                                                                                              >  4:251794/1‑151 (MQ=255)

                                        cGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCg                                                                                                           <  4:551356/151‑1 (MQ=255)

                                             tAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGCCCATGAAAATAGCCGTTGCCGGTaa                                                                                                       >  2:1037591/1‑150 (MQ=255)

                                              aGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTaaaa                                                                                                     <  4:1635707/151‑1 (MQ=255)

                                                cGGCCCGTAATGCAGCAACGCGTGTGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAAt                                                                                                    >  1:57908/1‑150 (MQ=255)

                                                 ggCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTc                                                                                                  >  3:389562/1‑151 (MQ=255)

                                                 ggCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTc                                                                                                  >  2:1000880/1‑151 (MQ=255)

                                                  gCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCt                                                                                                 >  2:556448/1‑151 (MQ=255)

                                                   cccGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCt                                                                                                 <  2:748334/150‑1 (MQ=255)

                                                   cccGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTg                                                                                                <  2:1646070/151‑1 (MQ=255)

                                                   cccGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTg                                                                                                <  2:1510629/151‑1 (MQ=255)

                                                   cccGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTg                                                                                                <  2:1047246/151‑1 (MQ=255)

                                                    ccGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGc                                                                                               <  4:461295/151‑1 (MQ=255)

                                                        aaTGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCg                                                                                            >  2:1121139/1‑150 (MQ=255)

                                                        aaTGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGa                                                                                           <  4:761889/151‑1 (MQ=255)

                                                         aTGCAGCATCGCGTGCGGTTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGAt                                                                                          <  4:303377/151‑1 (MQ=255)

                                                          ggtggcaAGGCGTCCGCCGATTAGTTTATCCGGAGAAGGGTTACGGCCCCCCGGATTGCCCCCGCCAGAAGCCTGTGGATTATAGGACATCTCTGCCGTTGCCGACGGGCGAGCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGa                                                                                           <  2:1114792/145‑1 (MQ=255)

                                                            cagcaACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTa                                                                                        >  2:1206707/1‑150 (MQ=255)

                                                             agcaACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAAt                                                                                      <  4:526795/151‑1 (MQ=255)

                                                              gcaACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATg                                                                                     <  2:1212045/151‑1 (MQ=255)

                                                                    cgTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAAc                                                                               <  3:209359/151‑1 (MQ=255)

                                                                    cgTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAAc                                                                               >  2:785757/1‑151 (MQ=255)

                                                                     gTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAAcc                                                                              <  2:323526/151‑1 (MQ=255)

                                                                       gCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACcgc                                                                            <  2:442348/151‑1 (MQ=255)

                                                                       gCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACcgc                                                                            <  4:651561/151‑1 (MQ=255)

                                                                        cGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACcgcg                                                                           >  2:535187/1‑151 (MQ=255)

                                                                         ggCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCgcgc                                                                          <  2:153063/151‑1 (MQ=255)

                                                                         ggCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCgcgc                                                                          <  2:1420688/151‑1 (MQ=255)

                                                                         ggCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCgcgc                                                                          >  2:873600/1‑151 (MQ=255)

                                                                          gCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACcgcgta                                                                         <  4:176974/151‑3 (MQ=255)

                                                                          gCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCgcgc                                                                          >  4:668065/1‑150 (MQ=255)

                                                                           cTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCa                                                                         <  2:1456433/150‑1 (MQ=255)

                                                                           cTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCAc                                                                        >  4:1627174/1‑151 (MQ=255)

                                                                             aTTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCg                                                                      >  2:1156578/1‑151 (MQ=255)

                                                                               tAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGt                                                                     <  1:195466/150‑1 (MQ=255)

                                                                                aGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTa                                                                    <  4:786929/150‑1 (MQ=255)

                                                                                   ttATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCAc                                                                >  1:179503/1‑151 (MQ=255)

                                                                                    tATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCAcc                                                               >  2:1336834/1‑151 (MQ=255)

                                                                                     aTCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCt                                                              >  2:1082199/1‑151 (MQ=255)

                                                                                      tCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCt                                                              <  2:1144508/150‑1 (MQ=255)

                                                                                        cAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCa                                                           <  1:1355/151‑1 (MQ=255)

                                                                                          gCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACg                                                         <  2:1169225/151‑1 (MQ=255)

                                                                                            tCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGa                                                        >  2:231790/1‑150 (MQ=255)

                                                                                            tCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGa                                                        >  4:1302372/1‑150 (MQ=255)

                                                                                             cAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAAt                                                      <  2:767264/151‑1 (MQ=255)

                                                                                               gggTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATc                                                     >  4:1291544/1‑150 (MQ=255)

                                                                                                   tACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACg                                                 >  2:693279/1‑150 (MQ=255)

                                                                                                   tACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACg                                                 >  2:1442396/1‑150 (MQ=255)

                                                                                                   tACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACg                                                 <  4:195624/150‑1 (MQ=255)

                                                                                                    aCTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGa                                                >  2:719662/1‑150 (MQ=255)

                                                                                                      tGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAAcc                                             >  4:1303472/1‑151 (MQ=255)

                                                                                                        aCCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCAt                                           >  4:1144704/1‑151 (MQ=255)

                                                                                                         ccGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCAtt                                          >  4:1292405/1‑151 (MQ=255)

                                                                                                         ccGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCAtt                                          >  4:1641290/1‑151 (MQ=255)

                                                                                                         ccGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCAt                                           <  1:298187/150‑1 (MQ=255)

                                                                                                          cGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTg                                         >  2:571937/1‑151 (MQ=255)

                                                                                                          cGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTg                                         <  4:631206/151‑1 (MQ=255)

                                                                                                           gCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTgg                                        >  2:1551176/1‑151 (MQ=255)

                                                                                                               gATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTg                                    >  2:952743/1‑151 (MQ=255)

                                                                                                                   gCTCCCGCCAGAAGCCTGTGGATTGTAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCa                                 <  4:770910/150‑1 (MQ=255)

                                                                                                                   gCTCCCGCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCTCCGTATCACCTTCACGAATCAACGAACCATTGGCCTGcc                                  >  2:628063/1‑149 (MQ=255)

                                                                                                                         gCCAGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAac                          >  1:95925/1‑151 (MQ=255)

                                                                                                                            aGAAGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAaccac                       >  4:1657232/1‑151 (MQ=255)

                                                                                                                              aaGCCTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAaccacc                      >  4:1440300/1‑150 (MQ=255)

                                                                                                                              aaGCCTGCGGCTTACAGCGCATCTCTGCCGTTGCCGACCGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGACCCATTGGCCTGCCAGGGCAaccaccc                     >  2:1554437/1‑150 (MQ=255)

                                                                                                                                 ccTGTGGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTg                  >  4:1278488/1‑151 (MQ=255)

                                                                                                                                    gtgGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGcc                <  4:1539429/150‑1 (MQ=255)

                                                                                                                                     tgGATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGcccc              >  2:1035248/1‑151 (MQ=255)

                                                                                                                                      ggATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGccca              <  2:1627452/150‑2 (MQ=255)

                                                                                                                                       gATTATAGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGcccc              >  4:1224785/1‑149 (MQ=255)

                                                                                                                                          tataGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGt           >  2:159479/1‑149 (MQ=255)

                                                                                                                                             aGGGCATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACggt      <  2:1078236/151‑1 (MQ=255)

                                                                                                                                                 cATCTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTc  <  1:220590/151‑1 (MQ=255)

ATGCCGTCACCAGTTCAACCGGAACGCTCGCGCTGGCATCCGGGTTAGCGGCCCGTAATGCAGCAACGCGTGCGGCTATTAGTTTATCCAGCTCAGGGTTACTGACCGCCAGATTGCTCCCGCCAGAAGCCTGTGGATTATAGGGCATTTCTGCCGTTGCCGACGGGCGACCATGAAAATAGCCGTTGCCGGTAAAATTCTGCCCGATTAATGCCGAACCGCGCACCGTATCACCTTCACGAATCAACGAACCATTGGCCTGCCAGGGAAACCACCATTGCCCCAGTACGGTGGTC  >  NC_000913/724610‑724905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A