Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I3 R1
|
160 |
117.2 |
4331776 |
85.4% |
3699336 |
149.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,693,262 |
G→A |
G334G (GGC→GGT) |
uidB ← |
glucuronide transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,693,262 | 0 | G | A | 99.0%
| 395.0
/ NA
| 105 | G334G (GGC→GGT) | uidB | glucuronide transporter |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (61/42); total (62/43) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 105 total aligned reads displayed.
AGGCAGGAATTGAACCTCCGATTGCCTGACCGCATTTACGGGTAAATGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACGCCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCGATCCTCGCGACCATCCCC > NC_000913/1693114‑1693409
|
aGGCAGGAATTGAACCTCCGATTGCCTGACCGCATTTACGGGTAAATGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACAcc < 2:514721/151‑1 (MQ=255)
ggCAGGAATTGAACCTCCGATTGCCTGACCGCATTTACGGGTAAATGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACAccc < 2:986817/151‑1 (MQ=255)
gAATTGAACCTCCGATTGCCTGACCGCATTTACGGGTAAATGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGAcc > 4:1207501/1‑151 (MQ=255)
aTTGAACCTCCGATTGCCTGACCGCATTTACGGGTAAATGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCaa < 4:114417/151‑1 (MQ=255)
gAACCTCCGATTGCCTGACCGCATTTACGGGTAAATGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAAtt < 3:429031/150‑1 (MQ=255)
ccTGACCGCATTTACGGGTAAATGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCa > 3:392503/1‑150 (MQ=255)
cTGACCGCATTTACGGGTAAATGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAAc > 4:1437278/1‑151 (MQ=255)
cTGACCGCATTTACGGGTAAATGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAAc > 2:900261/1‑151 (MQ=255)
ccGCATTTACGGGTAAATGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGca > 1:349360/1‑150 (MQ=255)
cccATTTACGGGTAAATGAGAATAATGAATAGACGAGCCCTTCAATTCGCACGCCGGGCAGGTATTCACCGTATACTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACGCCCTCACCCAGTGAAGCGATGGCCagc > 2:980067/3‑144 (MQ=255)
gCATTTACGGGTAAATGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGcaacc > 4:1624569/1‑151 (MQ=255)
cATTTACGGGTAAATGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGcaacc > 1:193700/1‑150 (MQ=255)
tACGGGTAAATGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACg < 3:112627/150‑1 (MQ=255)
tACGGGTAAATGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGc > 2:1214363/1‑151 (MQ=255)
ggTAAATGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCAcc < 2:1195974/151‑1 (MQ=255)
gtaagggagaACAGTGAATAGGGGAGCACTTCAATTCGCACGCCGGTCAGGTATTCACCGCATTCTACGTAATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCg > 2:1493188/7‑151 (MQ=255)
tAAATGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCgg > 2:21247/1‑151 (MQ=255)
aaaTGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCgg < 1:138395/150‑1 (MQ=255)
aaTGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCa < 2:268973/151‑1 (MQ=255)
gagaATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTg > 4:7444/1‑151 (MQ=255)
gagaATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTg > 2:805566/1‑151 (MQ=255)
aTAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGAcc > 3:334476/1‑150 (MQ=255)
aGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGAcc > 1:104183/1‑148 (MQ=255)
aGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGAcc > 1:85075/1‑148 (MQ=255)
aGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAg < 3:349377/150‑1 (MQ=255)
tGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACg > 2:1049014/1‑151 (MQ=255)
tGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACg > 4:703062/1‑151 (MQ=255)
tGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACg > 2:901024/1‑151 (MQ=255)
gAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGGCCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACg < 4:1640994/150‑1 (MQ=255)
gAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACgg < 1:170500/151‑1 (MQ=255)
aaTAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACgg > 2:720327/1‑150 (MQ=255)
aTAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGa > 1:284994/1‑150 (MQ=255)
tAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGaa > 1:23997/1‑150 (MQ=255)
aGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCaga < 4:1582082/151‑1 (MQ=255)
gCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCaga > 3:473309/1‑150 (MQ=255)
cccTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCagaag < 4:160318/151‑1 (MQ=255)
tCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAAc < 4:435095/150‑1 (MQ=255)
tCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAAc < 4:547206/150‑1 (MQ=255)
aaTTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAAcagc > 4:1177629/1‑151 (MQ=255)
aaTTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAAcagc > 1:363292/1‑151 (MQ=255)
gCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATa < 4:868140/151‑1 (MQ=255)
cACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATaa < 4:428491/151‑1 (MQ=255)
aCGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAAc > 1:241366/1‑151 (MQ=255)
cGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAAc < 2:1205984/150‑1 (MQ=255)
gCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCg > 2:1547178/1‑151 (MQ=255)
ccGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCg > 4:1373941/1‑150 (MQ=255)
ccGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGc < 2:358662/151‑1 (MQ=255)
cGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCa < 2:372013/151‑1 (MQ=255)
cAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGtt > 2:1191101/1‑151 (MQ=255)
cAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGtt > 4:1117782/1‑151 (MQ=255)
cAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGtt > 2:1159956/1‑151 (MQ=255)
aGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTc < 2:1176726/151‑1 (MQ=255)
aGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTc > 1:228438/1‑151 (MQ=255)
ggTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTcc > 4:224208/1‑151 (MQ=255)
aTTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTccc > 2:310619/1‑149 (MQ=255)
aTTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTccc > 4:721829/1‑149 (MQ=255)
aTTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTccc > 2:643414/1‑149 (MQ=255)
ttCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGc > 1:68821/1‑151 (MQ=255)
aCCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCaaa < 2:908012/151‑1 (MQ=255)
ccGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCaa > 4:868768/1‑149 (MQ=255)
gTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAgcg < 2:1009760/151‑1 (MQ=255)
gTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAgcg > 4:1070832/1‑151 (MQ=255)
gTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAgcg > 2:46775/1‑151 (MQ=255)
tATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAgcgc > 4:1447976/1‑151 (MQ=255)
aTTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAgcgc < 1:53277/150‑1 (MQ=255)
ttCTACGGTAACAGCTCCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAGCCGCAGGTTCCCAGCAAAgcgc < 4:1379544/149‑1 (MQ=255)
tCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCa > 2:142963/1‑150 (MQ=255)
cTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAAt > 4:582259/1‑151 (MQ=255)
aCGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAAt < 4:679014/149‑1 (MQ=255)
aCGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAAt > 2:120202/1‑149 (MQ=255)
cAGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGt > 1:357473/1‑151 (MQ=255)
aGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGt > 1:279701/1‑150 (MQ=255)
aGCTTCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTa < 3:80743/151‑1 (MQ=255)
ttCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTc > 4:72759/1‑151 (MQ=255)
tCCAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCt > 4:844966/1‑151 (MQ=255)
ccAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCtt < 2:1653722/151‑1 (MQ=255)
cAGCTCCCACATCACGGTCATGGTAACTCCCTGTCCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCATATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCtt < 2:872391/150‑1 (MQ=255)
cAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCaa > 3:450551/1‑126 (MQ=255)
cAGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCaa < 1:450531/126‑1 (MQ=255)
aGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCtttt < 2:286119/151‑1 (MQ=255)
aGCGCCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCtttt < 2:1331021/151‑1 (MQ=255)
gcCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATTGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTAc > 3:52349/1‑151 (MQ=255)
gcCCACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTAc > 4:345807/1‑151 (MQ=255)
cccACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTAcc > 4:1204389/1‑151 (MQ=255)
ccACATCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGTAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCg < 4:540067/151‑1 (MQ=255)
cacaTCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCg > 1:154235/1‑150 (MQ=255)
cacaTCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCGa < 3:279717/151‑1 (MQ=255)
caTCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCGATc < 2:5735/151‑1 (MQ=255)
caTCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCGATc < 2:1622592/151‑1 (MQ=255)
aTCACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCGATcc < 3:241381/151‑1 (MQ=255)
cACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCGATCCt < 4:1432778/150‑1 (MQ=255)
cACGGTCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCGATCCTc > 4:318343/1‑151 (MQ=255)
tCATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCGATCCTCGCGAc > 4:737562/1‑151 (MQ=255)
cATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCGATCCTCGCGAcc > 4:1642948/1‑151 (MQ=255)
cATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCGATCCTCGCGAcc > 1:97119/1‑151 (MQ=255)
cATGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCGATCCTCGCGAcc < 3:40478/151‑1 (MQ=255)
tGGTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCGATCCTCGCGACCAt > 4:284758/1‑151 (MQ=255)
ggTAACACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCGATCCTCGCGACCATc > 4:1556808/1‑151 (MQ=255)
aaCACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCGATCCTCGCGACCATcccc < 3:469000/151‑1 (MQ=255)
aaCACCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCGATCCTCGCGACCATccc < 2:1470817/150‑1 (MQ=255)
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AGGCAGGAATTGAACCTCCGATTGCCTGACCGCATTTACGGGTAAATGAGAATAGTGAATAGGTGAGCCCTTCAATTCGCACGCCGGTCAGGTATTCACCGTATTCTACGGTATCAGCTTCCAGCGCCCACATCACGGTCATGGTAACGCCCTGACCAATTGAAGCGATGGCCAACGCAACCAACGCCACCGGCAGTGACCAGACGGAAACCCAGAAGAACAGCAGATAACCGCAGGTTCCCAGCAAAGCGCCAATCAGGAAGGTATTCTTTTTACCGATCCTCGCGACCATCCCC > NC_000913/1693114‑1693409
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
