Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I3 R1
|
160 |
117.2 |
4331776 |
85.4% |
3699336 |
149.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,461,278 |
A→G |
intergenic (‑344/‑28) |
yfcZ ← / → fadL |
UPF0381 family protein/long‑chain fatty acid outer membrane transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,461,278 | 0 | A | G | 100.0%
| 475.0
/ NA
| 118 | intergenic (‑344/‑28) | yfcZ/fadL | UPF0381 family protein/long‑chain fatty acid outer membrane transporter |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (58/60); total (58/60) |
Only 100 of 119 total aligned reads displayed.
TTCTTAGATCATATTTGAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTATAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTTTCTTCCTCTGGCCTGGGCCGG > NC_000913/2461132‑2461425
|
ttCTTAGATCATATTTGAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTaa > 1:322290/1‑150 (MQ=255)
tCTTAGATCATATTTGAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTaaa < 4:1291715/150‑1 (MQ=255)
cTTAGATCATATTTGAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTaaaa > 4:359808/1‑150 (MQ=255)
tAGATCATATTTGAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTaaag < 2:135722/148‑2 (MQ=255)
tAGATCATATTTGAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTaaaaa < 1:369268/149‑1 (MQ=255)
aTCATATTTGAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAaaataaat > 3:140160/1‑151 (MQ=255)
cATATTTGAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAGGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATc < 2:1594085/150‑1 (MQ=255)
cATATTTGAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATc < 4:345088/150‑1 (MQ=255)
tatTTGAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCAtt > 2:767806/1‑151 (MQ=255)
tatTTGAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCAtt > 2:1506404/1‑151 (MQ=255)
tatTTGAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCAtt > 4:1683746/1‑151 (MQ=255)
tGAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAgg > 4:761608/1‑151 (MQ=255)
tGAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAgg > 2:640676/1‑151 (MQ=255)
tGAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAgg > 1:310256/1‑151 (MQ=255)
tGAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAg < 2:956920/150‑1 (MQ=255)
gAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAgg < 2:1560098/150‑1 (MQ=255)
gAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGt < 4:1068073/151‑1 (MQ=255)
aaaaaaGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGtt > 4:1169793/1‑151 (MQ=255)
aaGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATgg > 2:94283/1‑151 (MQ=255)
aTAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTc > 4:85210/1‑150 (MQ=255)
aGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATg < 2:1209285/151‑1 (MQ=255)
aGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATg < 2:85088/151‑1 (MQ=255)
gAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGa < 1:379783/151‑1 (MQ=255)
gAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCCCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGCTTGTGTAAAAATAAATCATTGAGGTTATGGTCATg > 4:1234718/1‑150 (MQ=255)
aaaCATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAg < 2:1674594/151‑1 (MQ=255)
aaCATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGc < 2:326328/151‑1 (MQ=255)
aaCATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGc < 2:858988/151‑1 (MQ=255)
aaCATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGc < 1:461538/151‑1 (MQ=255)
aCTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGa > 2:994235/1‑150 (MQ=255)
aCTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGa < 3:226600/150‑1 (MQ=255)
tGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAAc > 4:1125420/1‑151 (MQ=255)
tGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAAc > 3:346906/1‑151 (MQ=255)
gCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAAcc < 4:687694/151‑1 (MQ=255)
gCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAAc < 4:1598771/150‑1 (MQ=255)
cAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAAccc > 4:987290/1‑151 (MQ=255)
cAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAAccc > 2:33800/1‑151 (MQ=255)
aCATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTg > 4:1682123/1‑151 (MQ=255)
aTTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGtt > 2:442986/1‑151 (MQ=255)
tCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGttt > 2:9429/1‑150 (MQ=255)
cAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACa < 3:138020/151‑1 (MQ=255)
tGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGAGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGt > 2:1621883/1‑151 (MQ=255)
ggTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGt < 3:255496/150‑1 (MQ=255)
ggTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGt < 1:185088/150‑1 (MQ=255)
gTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCt < 4:462699/151‑1 (MQ=255)
gTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCt < 3:327082/151‑1 (MQ=255)
gTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCt < 3:397240/151‑1 (MQ=255)
ccGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTg < 2:565784/150‑1 (MQ=255)
ccGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGc < 2:1646761/151‑1 (MQ=255)
aCCTATACTCT‑‑CCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCtcg > 3:132668/1‑151 (MQ=255)
ataCTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCtcgca < 2:924178/151‑1 (MQ=255)
taCTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCtcgc > 2:116492/1‑149 (MQ=255)
ctctCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCtcgcagtc > 2:671657/1‑151 (MQ=255)
ctcGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCtcgcagtcgc > 2:28616/1‑151 (MQ=255)
gCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTcgcagtcgcagt > 2:842989/1‑151 (MQ=255)
tGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTAtc > 2:1066237/1‑151 (MQ=255)
tGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTAtc > 4:639577/1‑151 (MQ=255)
tGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTAtc > 1:187157/1‑151 (MQ=255)
aTTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTAtctc > 2:328528/1‑151 (MQ=255)
ttCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTcc > 2:1546868/1‑150 (MQ=255)
aaGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCAccc < 4:1609350/150‑1 (MQ=255)
aaGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCAccc > 2:670310/1‑150 (MQ=255)
aaGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCAcc < 2:1458056/149‑1 (MQ=255)
aaGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCAc < 4:1582845/148‑1 (MQ=255)
gTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCt < 3:467303/151‑1 (MQ=255)
gTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCt < 1:132654/151‑1 (MQ=255)
gTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCt < 1:94174/151‑1 (MQ=255)
gTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCt < 2:1454832/151‑1 (MQ=255)
ccTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGt > 4:1528094/1‑151 (MQ=255)
cTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTc > 4:1272534/1‑151 (MQ=255)
cAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTc < 4:1085410/149‑1 (MQ=255)
cAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCgg < 1:450234/151‑1 (MQ=255)
gACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGc > 4:363054/1‑150 (MQ=255)
aCCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCa < 2:1125153/150‑1 (MQ=255)
aCCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAg < 3:383843/151‑1 (MQ=255)
cccTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAgg > 2:636196/1‑151 (MQ=255)
acacTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCtt < 1:257887/150‑1 (MQ=255)
cacTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTc > 4:925294/1‑151 (MQ=255)
acTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCa < 2:85055/151‑1 (MQ=255)
ttCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGt > 4:685788/1‑151 (MQ=255)
ttCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGATATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGt > 4:945826/1‑151 (MQ=255)
tCGCGCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGt < 2:1579836/150‑1 (MQ=255)
cgcgCTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGtt < 2:1002663/150‑1 (MQ=255)
gcgcTCCTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTaa < 4:329022/151‑1 (MQ=255)
ccTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACg < 2:359273/149‑1 (MQ=255)
ccTGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGaa < 2:84805/151‑1 (MQ=255)
tGTTACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAAtt > 2:522801/1‑151 (MQ=255)
ttACAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGc > 3:459236/1‑128 (MQ=255)
aCAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTttct < 2:1663540/151‑1 (MQ=255)
aCAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTttct > 2:771399/1‑151 (MQ=255)
cAGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTttctt > 1:17668/1‑151 (MQ=255)
aGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTttcttc < 1:103406/151‑1 (MQ=255)
aGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTttcttc > 2:1048200/1‑151 (MQ=255)
aGCACGTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTttcttc < 2:736065/151‑1 (MQ=255)
gTAACATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTTTCTTCCTCTg < 4:1335605/151‑1 (MQ=255)
cATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTTTCTTCCTCTGGCCt > 2:587057/1‑151 (MQ=255)
cATAGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTTTCTTCCTCTGGCCt > 4:953068/1‑151 (MQ=255)
aGTTTGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTTTCTTCCTCTGGCCTgg < 2:1636883/150‑1 (MQ=255)
tttGTGTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTTTCTTCCTCTGGCCTGGGcc > 4:1036525/1‑151 (MQ=255)
ttGTGTAAAAATAAACCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTTTCTTCCTCTGGCCTGGGcc < 4:706938/150‑1 (MQ=255)
tgtgTAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTTTCTTCCTCTGGCCTGGGCCgg > 4:1086811/1‑151 (MQ=255)
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TTCTTAGATCATATTTGAAAAAAGATAGAAACATACTTGCAACATTCCAGCTGGTCCGACCTATACTCTCGCCACTGGTCTGATTTCTAAGATGTACCTCAGACCCTACACTTCGCGCTCCTGTTACAGCACGTAACATAGTTTGTATAAAAATAAATCATTGAGGTTATGGTCATGAGCCAGAAAACCCTGTTTACAAAGTCTGCTCTCGCAGTCGCAGTGGCACTTATCTCCACCCAGGCCTGGTCGGCAGGCTTTCAGTTAAACGAATTTTCTTCCTCTGGCCTGGGCCGG > NC_000913/2461132‑2461425
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
