Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F50 I3 R1
|
168 |
141.0 |
4346284 |
99.6% |
4328898 |
150.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
551,295 |
C→T |
T286M (ACG→ATG) |
ybcF → |
putative carbonate kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 551,295 | 0 | C | T | 99.1%
| 418.2
/ NA
| 110 | T286M (ACG→ATG) | ybcF | putative carbonate kinase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (30/79); minor base A (1/0); total (31/79) |
| Fisher's exact test for biased strand distribution p-value = 2.82e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 110 total aligned reads displayed.
CGTGCCATTCGCCATGCCACACCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACAATGCCTGATGCGATGCTT > NC_000913/551147‑551439
|
gTGCCATTCGCCATGCCACACCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCt < 1:788481/151‑1 (MQ=255)
gCCATTCGCCATGCCACACCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTgg < 1:1000657/151‑1 (MQ=255)
gCCATTCGCCATGCCACACCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTg < 1:1549238/150‑1 (MQ=255)
aTTCGCCATGCCACACCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTggcgg < 2:504484/151‑1 (MQ=255)
tCGCCATGCCACACCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTggcggg < 1:1118037/150‑1 (MQ=255)
cGCCATGCCACACCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTggcgggcg < 2:682820/151‑1 (MQ=255)
cGCCATGCCACACCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTggcgggcg < 2:1334202/151‑1 (MQ=255)
cGCCATGCCACACCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTggcgggc < 1:953009/150‑1 (MQ=255)
cATGCCACACCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAg < 2:2033641/151‑1 (MQ=255)
aTGCCACACCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGc < 1:1965218/151‑1 (MQ=255)
aTGCCACACCGGAGGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGc < 2:393011/151‑1 (MQ=255)
ccACACCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGGGGGGGTATGTCAGAAGCCGTGGTAAACCCGCGGGGGTTGGGGGGGTATCGCGCATTGAAGAGATGCTtgcgggggggggggg > 2:397881/1‑142 (MQ=255)
cacaCCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGGGGGGGTATGTTAGAAACCGTGGGAAAACCGCGGGGGTTGGGGGGGTATCGCGAATTTAAGAGATGGTggcgggggggaggggg > 2:194563/1‑141 (MQ=255)
cacaCCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCgggg < 2:22266/151‑1 (MQ=255)
acacCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGGGGGGGTATGTCAGAAACCGTGGGAAAACCGCGGGGGTTGGGGGGGTATCGCGGATTGAAGAGATGCTggcggggggaagggggg > 1:834391/1‑140 (MQ=255)
cacCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGAc < 2:570469/151‑1 (MQ=255)
ccGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGGGGGGGTATGTTAGAAACCGGGGGTAACCCCCGGGGGTTGGGGCGGTATCGCGGATTGAAGAGATGTTtgcggggggaagggggg > 2:160619/1‑137 (MQ=255)
cGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTg < 2:593000/151‑1 (MQ=255)
cGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTg < 2:2132037/151‑1 (MQ=255)
ggATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGt < 1:538809/151‑1 (MQ=255)
aTGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTAt < 2:1173547/151‑1 (MQ=255)
aTGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTAt < 2:1777819/151‑1 (MQ=255)
tGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTAt < 1:1141277/150‑1 (MQ=255)
gAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTAttt < 1:446379/151‑1 (MQ=255)
gAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTAttt < 1:1944896/151‑1 (MQ=255)
aGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGGGTGGTTATGTCCGAAACCGGGGGAAAACCGCGTGGGTTGGGGGGTTATTGCGGATTGAAAAGAAGCTGGGGGGGGGAggggggggccggttttt > 2:638764/1‑140 (MQ=255)
tAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGc < 1:991670/150‑1 (MQ=255)
aGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAGCCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCt < 1:90785/150‑1 (MQ=255)
aGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCt < 2:1533095/150‑1 (MQ=255)
gcgcCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGt < 1:905275/151‑1 (MQ=255)
gcgcCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGt < 1:1990999/151‑1 (MQ=255)
gcCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAg < 2:2044271/151‑1 (MQ=255)
gcCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAg < 2:67024/151‑1 (MQ=255)
ccATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGt < 1:1504098/151‑1 (MQ=255)
aTTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCg < 2:142799/151‑1 (MQ=255)
tGCCAAAGCCAATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGAGCTGTATTTCGCTGTAGTCGTa < 1:801740/150‑1 (MQ=255)
ccAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGc < 2:1820292/151‑1 (MQ=255)
cAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGGGGGTTTGTCAGAAGCCGTGGGAAAACCCCGGGGATTGGGGGGTTATCGCGAATTGAAGAGATGCTGGCGGGGGGAgggggggggcgtgttttt > 1:1355851/1‑124 (MQ=255)
aGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTa < 1:1649820/151‑1 (MQ=255)
ccGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGa < 1:18963/151‑1 (MQ=255)
gATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACa < 2:397421/151‑1 (MQ=255)
ggTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACAttt < 1:160043/151‑1 (MQ=255)
ggTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACAttt < 1:1287314/151‑1 (MQ=255)
gTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTtg < 1:1157899/151‑1 (MQ=255)
tCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTtgt < 1:1967362/150‑1 (MQ=255)
tCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTtgt < 1:85833/150‑1 (MQ=255)
cGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTtgtg < 2:656216/150‑1 (MQ=255)
cGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTtgtg < 2:1453778/150‑1 (MQ=255)
aTGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCt < 1:2136490/151‑1 (MQ=255)
ggggCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGa < 2:1714119/151‑1 (MQ=255)
ccGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCg < 1:1060942/151‑1 (MQ=255)
gAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGAc < 1:428245/151‑1 (MQ=255)
aaCGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGa < 1:1684759/151‑1 (MQ=255)
cggcggTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGAcg < 2:1781736/151‑1 (MQ=255)
tGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGGGGAGCGGGGGACTGTTTTTTGCTGTAGGCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGGCtt > 2:1157349/1‑151 (MQ=255)
tGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCtt > 1:1803097/1‑151 (MQ=255)
gAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGGCCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTTTGCCTGATGCGACGCTTGACGCGTCtt > 2:1745790/1‑150 (MQ=255)
gAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTa < 1:1242258/151‑1 (MQ=255)
gAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTCTAGTCGCAGGCATTAGACATTTTTGCCTGATGCGACGCTTGACGCGTCtt > 1:2078800/1‑150 (MQ=255)
aGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTa < 2:931569/150‑1 (MQ=255)
tGGTTATGTCAGAAACCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTTGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATc > 1:1425319/1‑150 (MQ=255)
ttATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGGAGCGGGGGACTGTATTTCGCTGTAGTCGGAGGCATTAGAAATTTGTGCCTGATGCGACGCTTGACGCGTCTTTTCAgg > 2:2116217/1‑150 (MQ=255)
tATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGcc > 1:370533/1‑151 (MQ=255)
aTGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGcc > 1:895434/1‑150 (MQ=255)
gTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTa < 2:1631241/150‑1 (MQ=255)
gTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTa > 1:1902054/1‑150 (MQ=255)
gTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTAc < 1:380748/151‑1 (MQ=255)
tCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCTTGATGCGACGCTTGACGCGTCTTATCAGGCCTAc > 1:897468/1‑150 (MQ=255)
tCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTAc > 1:1858573/1‑150 (MQ=255)
cAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACaa < 1:746628/151‑1 (MQ=255)
cAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGGATTTTTCTGTAGTCGTAGGCATTTGACATTTTTGCCTGAGGCGACGCTTGACGCGTCTTCTCCGGCCt > 2:356027/1‑147 (MQ=255)
aaGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCg < 1:1928466/151‑1 (MQ=255)
gTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGcc < 2:1503863/151‑1 (MQ=255)
gTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGcc < 1:131070/151‑1 (MQ=255)
gTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGGGcc > 1:561280/1‑151 (MQ=255)
aaaCCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCCGTATTTACCTGTAGTCGGAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAAGCCTACAACCCGTGCCGCATc > 1:159612/1‑151 (MQ=39)
aaCCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATcc < 1:575022/151‑1 (MQ=255)
ccGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGGCCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGGCTGATGCGACGCTTGACGCGGCTTATCAGGCCTACAACCGGGGCCGCATCCgg > 2:1357553/1‑150 (MQ=255)
gcgTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGGGGGGGCCTGTATTTCGCCGTAAGCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTTACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCa > 1:1252883/1‑150 (MQ=38)
gcgTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCaa < 1:571216/151‑1 (MQ=255)
gcgTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCaa < 1:935674/151‑1 (MQ=255)
cgTGGATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAAt < 1:1651420/151‑1 (MQ=255)
ggATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTgg < 1:990648/151‑1 (MQ=255)
gATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGGCCTGTATTTTGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAACGGTGCCGCATCCGGCAAtttg > 2:1763983/1‑148 (MQ=255)
gATTGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGt < 1:201355/151‑1 (MQ=255)
tGGGGCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGc < 1:821784/150‑1 (MQ=255)
ggggCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGcac < 1:313870/151‑1 (MQ=255)
ggCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACaa < 1:651714/151‑1 (MQ=255)
gCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACAAt < 1:1995114/151‑1 (MQ=255)
gCGTTATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACAAt < 1:474120/151‑1 (MQ=255)
tATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACAATGcc < 2:1899451/150‑1 (MQ=255)
tATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACAATGcc < 2:1022465/150‑1 (MQ=255)
tATCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGCATTTTTCTGTAGTCGTAGGCATTAGACAATTTTGCCTGATGCGGCGCTTTACGCGTCTTATAAAGCCCACAAACAGTGCCGCATCCCGCAATTGGGGCACAAAGcc > 2:73163/1‑150 (MQ=255)
aTCGCGAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTTGCTGTAGTCGTAGGCATTAGACATTTGTGGCTGATGCGACGCTTGACGCGTCTTATTAGGCCTACAACCGGGGGCGCATCCGGCAAATTGTGGACAATGcc > 2:1855454/1‑149 (MQ=255)
cgcgAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACAATGCCTgat < 1:416139/151‑1 (MQ=255)
cgcgAATTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACAATGCCTga < 1:1225838/150‑1 (MQ=255)
aaTTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTTTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACCATGCCTgattcg > 1:1400059/1‑150 (MQ=255)
aTTGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACAATGCCTgatgcgat < 2:1778133/151‑1 (MQ=255)
tGAAGAGATGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTTTCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACAATGCCTgctgcgatg > 2:2004872/1‑150 (MQ=255)
gagaTGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACAATTCCTGATGCGATGCtt > 2:898406/1‑149 (MQ=255)
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CGTGCCATTCGCCATGCCACACCGGATGAGTTAGCGCCATTTGCCAAAGCCGATGGTTCGATGGGGCCGAATGTAACGGCGGTGAGTGGTTATGTCAGAAGCCGTGGTAAACCCGCGTGGATTGGGGCGTTATCGCGAATTGAAGAGACGCTGGCGGGCGAAGCGGGGACCTGTATTTCGCTGTAGTCGTAGGCATTAGACATTTGTGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACAATGCCTGATGCGATGCTT > NC_000913/551147‑551439
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
