Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F50 I3 R1 168 141.0 4346284 99.6% 4328898 150.4

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,197,150 T→C pseudogene (677/2847 nt) yehH → DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,197,1500TC100.0% 573.3 / NA 154pseudogene (677/2847 nt)yehHDUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N‑terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (79/75);  total (79/75)

Only 100 of 157 total aligned reads displayed.

AATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACTTGGAGCAATATTCCAGATTTGAAT  >  NC_000913/2197003‑2197296
                                                                                                                                                   |                                                                                                                                                  
aaTGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGccc                                                                                                                                                  >  2:1616033/1‑150 (MQ=255)
     cAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAg                                                                                                                                            <  1:1881646/151‑1 (MQ=255)
      aaaaCACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAgg                                                                                                                                           >  1:220956/1‑151 (MQ=255)
        aaCACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCg                                                                                                                                         <  1:1879385/151‑1 (MQ=255)
          cacCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGt                                                                                                                                       >  1:1694284/1‑151 (MQ=255)
            ccGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCt                                                                                                                                     <  2:10632/151‑1 (MQ=255)
                 gCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAat                                                                                                                                >  2:409362/1‑151 (MQ=255)
                  cccAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAata                                                                                                                               <  1:1921157/151‑1 (MQ=255)
                  cccAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAata                                                                                                                               <  1:371619/151‑1 (MQ=255)
                  cccAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAat                                                                                                                                >  1:987184/1‑150 (MQ=255)
                   ccAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAatat                                                                                                                              <  2:779540/151‑1 (MQ=255)
                   ccAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAatat                                                                                                                              >  1:180320/1‑151 (MQ=255)
                   ccAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAatat                                                                                                                              >  1:1512515/1‑151 (MQ=255)
                    cAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATg                                                                                                                             >  1:334908/1‑151 (MQ=255)
                     aGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGc                                                                                                                            >  1:1316145/1‑151 (MQ=255)
                        cGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTAc                                                                                                                         >  1:142780/1‑151 (MQ=255)
                        cGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTAc                                                                                                                         >  1:896958/1‑151 (MQ=255)
                         gATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACt                                                                                                                        <  1:292043/151‑1 (MQ=255)
                          aTCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTg                                                                                                                       >  1:1421664/1‑151 (MQ=255)
                            cagtcagATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGa                                                                                                                      <  1:51274/150‑1 (MQ=255)
                            cagtcagATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGAt                                                                                                                     >  1:920491/1‑151 (MQ=255)
                            cagtcagATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGAt                                                                                                                     >  2:963270/1‑151 (MQ=255)
                              gtcagATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGt                                                                                                                   <  1:1570667/151‑1 (MQ=255)
                                cagATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGta                                                                                                                  >  1:1384382/1‑150 (MQ=255)
                                cagATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGta                                                                                                                  <  2:1935485/150‑1 (MQ=255)
                                cagATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGta                                                                                                                  <  2:620788/150‑1 (MQ=255)
                                     cGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTaataat                                                                                                             >  1:71916/1‑150 (MQ=255)
                                      gACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATac                                                                                                           <  2:1111001/151‑1 (MQ=255)
                                       aCGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATac                                                                                                           >  2:499532/1‑150 (MQ=255)
                                         ggCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACAcc                                                                                                        >  1:1734202/1‑151 (MQ=255)
                                            cTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTc                                                                                                     >  2:1225191/1‑151 (MQ=255)
                                             tGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTc                                                                                                     >  2:1864924/1‑150 (MQ=255)
                                              gAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCa                                                                                                    >  2:1275413/1‑150 (MQ=255)
                                              gAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCa                                                                                                    <  1:1061228/150‑1 (MQ=255)
                                               aaaaCAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAAc                                                                                                  >  2:299066/1‑151 (MQ=255)
                                                 aacaacACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAAc                                                                                                  >  1:1593257/1‑149 (MQ=255)
                                                 aacaacACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAg                                                                                                <  2:577704/151‑1 (MQ=255)
                                                 aacaacACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAg                                                                                                <  2:1536393/151‑1 (MQ=255)
                                                     acacAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTg                                                                                            <  2:468824/151‑1 (MQ=255)
                                                     acacAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTg                                                                                            >  1:841565/1‑151 (MQ=255)
                                                       acaGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGat                                                                                          <  2:1663412/151‑1 (MQ=255)
                                                         aGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGatat                                                                                        >  2:668004/1‑151 (MQ=255)
                                                            tACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTg                                                                                      <  2:1640959/150‑1 (MQ=255)
                                                             aCCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGa                                                                                     >  2:268306/1‑150 (MQ=255)
                                                              ccATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAAt                                                                                   <  2:1715877/151‑1 (MQ=255)
                                                              ccATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAAt                                                                                   >  1:1782445/1‑151 (MQ=255)
                                                               cATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATg                                                                                  <  1:815040/151‑1 (MQ=255)
                                                                aTCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATgg                                                                                 >  1:1107990/1‑151 (MQ=255)
                                                                  cACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATggg                                                                                >  1:769632/1‑150 (MQ=255)
                                                                  cACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATggg                                                                                <  1:1302610/150‑1 (MQ=255)
                                                                    ccAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGAtt                                                                             <  1:1001495/151‑1 (MQ=255)
                                                                    ccAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGAtt                                                                             <  1:1975663/151‑1 (MQ=255)
                                                                    ccAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGAt                                                                              <  1:346032/150‑1 (MQ=255)
                                                                      aGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGAt                                                                              <  2:1390322/148‑1 (MQ=255)
                                                                      aGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTAt                                                                           <  1:2151428/151‑1 (MQ=255)
                                                                      aGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTAt                                                                           >  2:2051322/1‑151 (MQ=255)
                                                                       gTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATg                                                                          >  2:1590318/1‑151 (MQ=255)
                                                                         aaTGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCg                                                                        <  2:1362680/151‑1 (MQ=255)
                                                                          aTGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGa                                                                       <  1:404328/151‑1 (MQ=255)
                                                                             gCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGaat                                                                     >  2:926531/1‑150 (MQ=255)
                                                                                  aCTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGt                                                                <  2:314/150‑1 (MQ=255)
                                                                                    tCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCat                                                             >  1:296665/1‑151 (MQ=255)
                                                                                     cACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCatt                                                            <  2:1730201/151‑1 (MQ=255)
                                                                                      aCGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCatta                                                           <  2:445311/151‑1 (MQ=255)
                                                                                       cGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCattat                                                          >  2:1537322/1‑151 (MQ=255)
                                                                                        ggCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCattatt                                                         >  2:849494/1‑151 (MQ=255)
                                                                                         gCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCattatta                                                        <  1:167676/151‑1 (MQ=255)
                                                                                          cACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCattattat                                                       >  2:1563011/1‑151 (MQ=255)
                                                                                           aCTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCattattatt                                                      <  2:226299/151‑1 (MQ=255)
                                                                                             ttGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCt                                                    >  2:61258/1‑151 (MQ=255)
                                                                                              tgaaatgaaaTGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTc                                                     <  2:1851103/149‑1 (MQ=255)
                                                                                              tgaaatgaaaTGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTc                                                     <  2:732103/149‑1 (MQ=255)
                                                                                              tgaaatgaaaTGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTg                                                   >  1:59297/1‑151 (MQ=255)
                                                                                              tgaaatgaaaTGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTg                                                   >  2:212627/1‑151 (MQ=255)
                                                                                                 aatgaaatgCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCg                                                <  1:649119/151‑1 (MQ=255)
                                                                                                 aatgaaatgCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCg                                                <  1:1118595/151‑1 (MQ=255)
                                                                                                  atgaaatgCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGt                                               <  1:1839445/151‑1 (MQ=255)
                                                                                                      aatgCACAAGATATAAAGCGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTgg                                           >  1:1981623/1‑151 (MQ=255)
                                                                                                          cacaAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCAtt                                       <  2:2121258/151‑1 (MQ=255)
                                                                                                          cacaAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCAtt                                       <  2:2014177/151‑1 (MQ=255)
                                                                                                          cacaAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCAtt                                       >  1:1474255/1‑151 (MQ=255)
                                                                                                          cacaAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCAtt                                       >  2:330317/1‑151 (MQ=255)
                                                                                                           acaAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTg                                      <  1:1616061/151‑1 (MQ=255)
                                                                                                            caAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGc                                     >  2:1521639/1‑151 (MQ=255)
                                                                                                               gATATAAAGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCAcc                                  <  1:1929765/151‑1 (MQ=255)
                                                                                                                     aaGTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTa                            <  1:899046/151‑1 (MQ=255)
                                                                                                                       gTGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACt                          <  2:58886/151‑1 (MQ=255)
                                                                                                                        tGCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACt                          <  2:1782070/150‑1 (MQ=255)
                                                                                                                         gCGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACTTg                        <  2:656950/151‑1 (MQ=255)
                                                                                                                          cGTGAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACTTgg                       >  1:1374617/1‑151 (MQ=255)
                                                                                                                             gAGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACTTGGAg                     <  2:1117650/150‑1 (MQ=255)
                                                                                                                              aGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACTTGGAGc                    >  1:305454/1‑150 (MQ=255)
                                                                                                                              aGGATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACTTGGAGCa                   <  2:1769002/151‑1 (MQ=255)
                                                                                                                               ggATGTTATGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACTTGGAGCaa                  <  2:2061846/151‑1 (MQ=255)
                                                                                                                                      aTGGATCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACTTGGAGCAATATTcc            <  1:1251729/150‑1 (MQ=255)
                                                                                                                                           tCAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACTTGGAGCAATATTCCAGAttt      >  2:913700/1‑151 (MQ=255)
                                                                                                                                            cAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACTTGGAGCAATATTCCAGATTTg     >  2:322033/1‑151 (MQ=255)
                                                                                                                                            cAGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACTTGGAGCAATATTCCAGATTTg     <  2:1964027/151‑1 (MQ=255)
                                                                                                                                             aGATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACTTGGAGCAATATTCCAGATTTg     >  1:1565307/1‑150 (MQ=255)
                                                                                                                                              gATCGCCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACTTGGAGCAATATTCCAGATTTGaa   <  1:2018105/151‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
AATGGCAAAACACCGTCGCCCAGGCGATCAGTCAGATCGACGGCCTGAAAACAACACAGTTACCATCACCAGTAATGGCTGTACTCACGGCACTTGAAATGAAATGCACAAGATATAAAGTGCGTGAGGATGTTATGGATCAGATCGTCCAGGAAGGCGGTCTGGAATATGCTACTGATGTAATAATACACCTTCAACAGATTGATATTGAATGGGATTATGCGAATAATGTCATTATTATTCTGCCGTCTGGCATTGCACCTAGCTACTTGGAGCAATATTCCAGATTTGAAT  >  NC_000913/2197003‑2197296

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A