Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I1 R1
|
144 |
141.8 |
4677362 |
93.6% |
4378010 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC JC |
NC_000913 |
944,912 |
Δ1 bp :: IS186 (+) +6 bp :: Δ1 bp |
intergenic (+16/+14) |
dmsC → / ← ycaC |
dimethyl sulfoxide reductase, anaerobic, subunit C/putative isochorismatase family hydrolase |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
608008 = | NA (NA) | 129 (0.940) |
99/292 |
0.4 |
100% |
noncoding (2/1345 nt) |
IS186 |
repeat region |
| ? | NC_000913 |
= 944917 |
0 (0.000) | intergenic (+21/+14) |
dmsC/ycaC |
dimethyl sulfoxide reductase, anaerobic, subunit C/putative isochorismatase family hydrolase |
| * |
? |
NC_000913 |
= 609350 | NA (NA) | 139 (1.010) |
107/292 |
0.2 |
100% |
noncoding (1344/1345 nt) |
IS186 |
repeat region |
| ? | NC_000913 |
944912 = |
0 (0.000) | intergenic (+16/+19) |
dmsC/ycaC |
dimethyl sulfoxide reductase, anaerobic, subunit C/putative isochorismatase family hydrolase |
Only 100 of 137 total aligned reads displayed.
GGTTAGAGCCCCGGCATTACGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/608160‑608008
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGGAACCGCAGGCTGATAACCTTTT < NC_000913/944917‑944770
GGTTAGAGCCCCGGCATTACGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATG < 2:578576/151‑1
GTTAGAGCCCCGGCATTACGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGG < 2:1139066/151‑1
TTAGAGCCCCGGCATTACGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGG > 2:1476218/1‑151
TAGAGCCCCGGCATTACGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGC > 3:29548/1‑151
TAGAGCCCCGGCATTACGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGG < 2:687630/150‑1
TAGAGCCCCGGCATTACGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGG < 2:1486130/150‑1
AGAGCCCCGGCATTACGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCC > 1:1288423/1‑151
CCCCGGCATTACGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAA > 2:1373199/1‑150
GCATTACGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCG > 2:394384/1‑151
TACGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGCGCCGAAACCCCGGCTG > 4:411830/1‑151
CGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTT > 1:512307/1‑151
GTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTT > 3:78442/1‑150
AAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTA < 1:458769/151‑1
AGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAt < 4:282654/151‑2
AGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAG < 3:350036/151‑1
AGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATT > 2:679008/1‑149
TATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCT > 2:1590346/1‑151
CCAGTTCCTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGC < 1:1042404/151‑1
CAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCG > 1:359209/1‑151
CAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCG < 2:1589544/151‑1
AGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCG > 1:160860/1‑150
CGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCAT > 2:923597/1‑151
TACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCa < 4:10714/149‑2
ACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCAC < 4:406895/150‑1
CCAATATGGGCCAGAATTGCTGACTAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGG > 2:239502/1‑151
CAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGT > 4:261943/1‑151
AATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTC < 2:889422/151‑1
ATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTC > 2:576513/1‑150
ATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCAT < 4:331467/150‑1
TGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATAT > 2:956037/1‑151
GCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCA < 1:1219391/151‑1
CAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAA > 2:163944/1‑150
AGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAA < 4:43840/149‑1
ATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCAT > 3:319456/1‑151
CTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGA > 1:1062396/1‑150
TGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAAT > 2:1548077/1‑151
GACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAA < 2:1211074/149‑1
ACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATAC < 3:500699/151‑1
CCAGTTATCGTGAGAGTAATTAATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACG > 2:155223/1‑151
AGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCC > 4:67458/1‑151
GTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCG < 2:980740/151‑1
TATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGC < 1:481443/150‑1
ATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCG < 4:101523/150‑1
CGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACC > 3:387376/1‑151
GTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCG < 2:119065/151‑1
GAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGAT > 2:938117/1‑151
GAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGA < 2:1294749/150‑1
GAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGA < 4:256564/150‑1
GAGTAATTCATCGGCACGTTAAATCATATCCGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGTGCCGAAACCCCGGTTGTTATGATTCGCTTGCGACGCCCATCTCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATT > 1:720591/1‑150
GAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATT < 2:154967/150‑1
TAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATT > 2:912796/1‑151
TAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATT > 1:418270/1‑151
AATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTC > 1:1156636/1‑151
AATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATT < 2:344811/150‑1
ATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCC > 3:334668/1‑151
TCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCC > 1:695797/1‑151
TCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGC > 1:1065717/1‑151
TCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGC > 1:182331/1‑151
CGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCC > 2:834960/1‑151
GGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCA < 1:1646229/151‑1
CACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGA < 4:334649/151‑1
CACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGA < 1:1459058/151‑1
CGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAG < 2:1659433/151‑1
CGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAG < 2:1366707/151‑1
GTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGC > 3:464769/1‑151
TAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGC > 1:1412196/1‑149
TAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGC > 1:176053/1‑149
AAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGA < 1:657912/151‑1
AAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAG < 1:1166316/150‑1
AAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGC > 2:1601972/1‑148
ATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAAT < 2:634507/151‑1
TCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATG > 2:813578/1‑151
CATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATG > 2:1400729/1‑150
TATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAAT > 2:388371/1‑151
TATCAGGCGTAATAACACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAA > 1:665054/1‑150
ATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATG < 1:1476059/151‑1
ATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATG > 3:522163/1‑151
TCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATG > 1:959270/1‑150
GCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACA < 2:211505/151‑1
CGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAG < 2:1149466/151‑1
CGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAG < 1:826654/151‑1
CGTAATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATAC > 1:1379289/1‑149
AATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAA < 2:300936/151‑1
AATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCAACGGTCATATGCAAACCATAGAATACGCGGCGACCGATTAATCCCCCTGCCAGAAGCAGAATGAATGATACAGAA > 2:1051121/1‑150
ATACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAA > 3:441828/1‑149
ACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGT > 1:630380/1‑150
ACCACAACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAG > 1:1621247/1‑149
AACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGGA < 2:1022992/151‑1
AACCCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGG > 2:352983/1‑150
CCTTAAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGGAACC < 4:553031/151‑1
AAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGGAACCGCA < 2:500921/150‑1
AAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGGAACCGC > 1:326168/1‑149
AAGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGGAACCGC > 1:152238/1‑149
AGTTAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGGAACCGCAGG < 3:280881/151‑1
TAGCGCTTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGGAACCGCAGGCT < 3:530031/150‑1
TTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGGAACCGCAGGCTGATAACC > 2:1720375/1‑151
TTATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGGAACCGCAGGCTGATAACC > 1:1150422/1‑151
TATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGGAACCGCAGGCTGAGAAC < 1:126293/149‑1
ATGGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGGAACCGCAGGCTGATAACCT < 2:1223779/150‑1
GGGCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGGAACCGCAGGCTGATAACCTTT < 2:1290331/150‑1
GGTTAGAGCCCCGGCATTACGTGCCGAAGTATCCAGTTCTTCGGGCTTACCAATATGGGCCAGAATTGCTGACCAGTTATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/608160‑608008
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggCCGAAACCCCGGTTGTTATGATTAGCTTGCGACGGCCATCCCCACGGTCATATGCAAACCATAGAATACGCCGCGACCGATTAATTCCCCTGCCAGAAGCAGAATGAATGATACAGAAAGTAGCGGAACCGCAGGCTGATAACCTTTT < NC_000913/944917‑944770
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
