Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I1 R1
|
144 |
141.8 |
4677362 |
93.6% |
4378010 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,515,171 |
T→C |
V137A (GTG→GCG) |
ydcV → |
putative ABC transporter permease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,515,171 | 0 | T | C | 99.3%
| 524.9
/ ‑4.5
| 145 | coding (410/795 nt) | ydcV | putative ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (74/70); minor base . (1/0); total (75/70) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 145 total aligned reads displayed.
GCCGCGCTGTGGCGACGAGACTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGTGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAATGGCTGGCAAACCTTCCGCTACGTAGTGTTGCCGAATC > NC_000913/1515023‑1515317
|
ccGCGCTGTGGCGACGAGACTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCggt < 4:217229/151‑1 (MQ=255)
ccGCGCTGTGGCGACGAGACTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGACACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCgg < 1:734662/150‑1 (MQ=255)
cgcgCTGTGGCGACGAGACTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCggtc > 1:201443/1‑151 (MQ=255)
gcgcTGTGGCGACGAGACTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCggtcg < 2:429659/151‑1 (MQ=255)
gcgcTGTGGCGACGAGACTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCggtcg > 3:173083/1‑151 (MQ=255)
cgcTGTGGCGACGAGACTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCggtcgg > 3:344673/1‑151 (MQ=255)
gcTGTTGCGACGAGACTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCggtcgg > 1:370727/1‑150 (MQ=255)
cTGTGGCGACGAGACTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCggtcggtc > 2:945498/1‑151 (MQ=255)
tgGCGACGAGACTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATg > 2:544840/1‑151 (MQ=255)
ggCGACGAGACTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGc < 1:90470/151‑1 (MQ=255)
gcggacgaGCATTGTTCGGCAAAACCGCCATTTGGCTGTTCCTGCGGCTACCCATGCCGCTGCCGGGCATTGTCATGGTTCTGGCGTTATAAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATg < 2:284900/147‑1 (MQ=255)
cgacgaGACTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGa < 2:1739299/151‑1 (MQ=255)
gacgaGACTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCg < 1:1429912/149‑1 (MQ=255)
cgaGACTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACtt > 1:155096/1‑151 (MQ=255)
gaCTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACttttt > 2:476470/1‑151 (MQ=255)
cTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTCCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTtgt > 3:208748/1‑151 (MQ=255)
cGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGtt < 2:1501128/151‑1 (MQ=255)
cGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGtt < 2:1277881/151‑1 (MQ=255)
cAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTAACCATCG‑GGTCGGTCATGCGACTTTTTGTGCAGTTgtgg > 1:712446/1‑151 (MQ=255)
aaaaaCGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTtgtg < 1:1072801/150‑1 (MQ=255)
aaaaaCGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTgtgg < 1:494753/151‑1 (MQ=255)
aaaCGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTgtggtg > 1:1469790/1‑151 (MQ=255)
aaCGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGgtgt > 1:465229/1‑151 (MQ=255)
aaCGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGgtgt > 2:609994/1‑151 (MQ=255)
ccccATTCCGCTGTTCCTGCTGCTGCCCATTGCGCTCCCGGGATTTGTCACTGGTCTGGCGTTATTACCCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGtt < 2:501425/148‑1 (MQ=255)
cGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGttt < 3:119432/151‑1 (MQ=255)
cGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGttt > 2:1127315/1‑151 (MQ=255)
cGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGttt < 2:1578867/151‑1 (MQ=255)
cATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAAc > 1:1631466/1‑151 (MQ=255)
cATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAAc > 1:595952/1‑151 (MQ=255)
aTTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAAct < 2:1460295/151‑2 (MQ=255)
aTTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAAc > 1:597649/1‑150 (MQ=255)
tCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATg > 2:1076892/1‑151 (MQ=255)
tCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATg > 1:251749/1‑151 (MQ=255)
cGCTGTTTCTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGt < 3:64331/151‑1 (MQ=255)
cGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATg < 2:456293/150‑1 (MQ=255)
tGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCAt > 2:38006/1‑151 (MQ=255)
gTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTACCCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCAt < 2:722248/150‑1 (MQ=255)
gTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATc > 3:287778/1‑151 (MQ=255)
gTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATc < 2:1209590/151‑1 (MQ=255)
tACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAAc < 2:368052/140‑1 (MQ=255)
tACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAAc > 1:367999/1‑140 (MQ=255)
gctgctgcCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCg < 2:1207895/150‑1 (MQ=255)
gctgctgcCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGt > 1:44156/1‑151 (MQ=255)
gctgctgcCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGt > 2:1056140/1‑151 (MQ=255)
ctgctgcCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCg < 3:219098/149‑1 (MQ=255)
ctgctgcCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGtt > 2:1448939/1‑151 (MQ=255)
tgctgcCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGACTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGttt > 1:995736/1‑151 (MQ=255)
gctgcCCATTGCGCTGCCGGGCATTGTCACTGTTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGttt < 2:1586807/150‑1 (MQ=255)
gctgcCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGtttt > 4:147361/1‑151 (MQ=255)
gctgcCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGttta < 1:201068/151‑2 (MQ=255)
ctgcCCATTCCGCTGCCGGGCATTGTCTCTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGttt < 1:493435/149‑1 (MQ=255)
gcCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTc < 1:616128/149‑1 (MQ=255)
cATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTcgccgc > 1:1185712/1‑151 (MQ=255)
ttGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCa < 3:28520/150‑1 (MQ=255)
cgcTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCAcctc < 2:1356427/151‑1 (MQ=255)
tGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTg > 3:370641/1‑151 (MQ=255)
gCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCAcctcct < 4:46296/149‑1 (MQ=255)
gCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTg < 2:922643/150‑1 (MQ=255)
cGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTgg > 2:94427/1‑149 (MQ=255)
aTTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTgg < 3:332546/151‑1 (MQ=255)
gTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGtt < 2:715753/150‑1 (MQ=255)
tCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTg > 1:1032128/1‑150 (MQ=255)
cACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGa < 1:154561/150‑1 (MQ=255)
cTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCa > 2:1487133/1‑150 (MQ=255)
ggCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCaa < 1:638011/149‑1 (MQ=255)
ggCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCa < 1:945380/148‑1 (MQ=255)
cGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATgg > 2:1728540/1‑150 (MQ=255)
tattaACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAg > 3:151391/1‑137 (MQ=255)
tattaACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAg < 4:151370/137‑1 (MQ=255)
tattaACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATc < 1:1186904/150‑1 (MQ=255)
attaACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGTCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCt < 2:546930/150‑1 (MQ=255)
attaACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCt < 1:1513611/150‑1 (MQ=255)
ttaACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTg > 3:49240/1‑151 (MQ=255)
taACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATc < 1:134410/147‑1 (MQ=255)
taACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTg < 4:344654/150‑1 (MQ=255)
aaCCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTggg > 1:1613279/1‑151 (MQ=255)
aaCCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTgg < 4:287760/150‑1 (MQ=255)
cGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGcc > 4:453423/1‑151 (MQ=255)
cGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGcc > 2:1241698/1‑151 (MQ=255)
gCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCa < 2:1151807/151‑1 (MQ=255)
ccTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCa > 2:1323818/1‑150 (MQ=255)
aaaaCCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAAtggc < 2:295296/150‑1 (MQ=255)
aaCCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAAtggctgg > 1:991768/1‑151 (MQ=255)
aaCCATCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAAtggctgg < 1:399081/151‑1 (MQ=255)
aTCAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAATGGCTGGCaa > 2:869728/1‑150 (MQ=255)
cAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAATGGCTGGCAAAcc > 3:477778/1‑151 (MQ=255)
cAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAATGGCTGGCAAAc < 1:192524/150‑1 (MQ=255)
cAATCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAATGGCTGGCAAAc < 1:800886/150‑1 (MQ=255)
aaTCTGGAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAATGGCTGGCAAACCt > 2:1374535/1‑151 (MQ=255)
ggAGCCGGGATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAATGGCTGGCAAACCTTcc < 1:247570/149‑1 (MQ=255)
gggATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAATGGCTGGCAAACCTTCCGCTACGTa < 2:185471/151‑1 (MQ=255)
ggATTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAATGGCTGGCAAACCTTCCGCTACg > 1:184512/1‑148 (MQ=255)
aTTTTTCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAATGGCTGGCAAACCTTCCGCTACGTAgtg < 2:201474/151‑1 (MQ=255)
tttCACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAATGGCTGGCAAACCTTCCGCTACGTAGTGTTg > 2:1690925/1‑151 (MQ=255)
tttCACCATCGCGGCCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAGTGGATCTTGGGGCCAATGGCTGGCAAACCTTCCGCTACGTAGTGCTg > 2:361674/1‑151 (MQ=255)
cACCATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAATGGCTGGCAAACCTTCCGCTACGTAGTGTTGc > 2:1183365/1‑149 (MQ=255)
ccATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAATGGCTGGCAAACCTTCCGCTACGTAGTGTTGCCGaa < 1:136438/151‑1 (MQ=255)
ccATCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGGGTTTAACAATGTCATCGCCCGTTTTCGCCTCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGTGCCAATGGCTGTCAAGCCTTCCGCTTCTTATTGTTGcc < 1:1056013/148‑1 (MQ=255)
aTCGCGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAATGGCGGGCAAACCTTCCGCTACGTAGTGTTGCCGAAtc < 2:610840/151‑1 (MQ=255)
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GCCGCGCTGTGGCGACGAGACTTTTTCGGCAAAAACGCCATTTCGCTGTTACTGCTGCTGCCCATTGCGCTGCCGGGCATTGTCACTGGTCTGGCGTTATTAACCGCCTTTAAAACCATCAATCTGGAGCCGGGATTTTTCACCATCGTGGTCGGTCATGCGACTTTTTGTGTAGTTGTGGTGTTTAACAATGTCATCGCCCGTTTTCGCCGCACCTCCTGGAGTCTGGTTGAGGCGTCAATGGATCTTGGGGCCAATGGCTGGCAAACCTTCCGCTACGTAGTGTTGCCGAATC > NC_000913/1515023‑1515317
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
