Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I1 R1
|
144 |
141.8 |
4677362 |
93.6% |
4378010 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,929,306 |
G→A |
A134A (GCC→GCT) |
yebE ← |
DUF533 family inner membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,929,306 | 0 | G | A | 99.2%
| 482.5
/ ‑5.5
| 122 | A134A (GCC→GCT) | yebE | DUF533 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (72/49); total (73/49) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 |
Only 100 of 122 total aligned reads displayed.
TAAAATGGTCAATATCAATAGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCGGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTGCGCGCCAAACTGCGGTTCGTCCTG > NC_000913/1929158‑1929452
|
tAAAATGGTCAATATCAATAGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGc > 3:176410/1‑151 (MQ=255)
aaaaTGGTCAATATCAATAGCCGCTCAACTCAGGAAATTGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTATCCAGGCGTTGTGGATCCCGCGGTTGTTCGATTGCCTTCTTAATGAGTACCCGCCCCTGCTCTTCCACGCCAGCt < 1:1581155/151‑1 (MQ=255)
aaTGGTCAATATCAATAGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTcc > 2:772261/1‑151 (MQ=255)
aaTGGTCAATATCAATAGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTcc > 3:56883/1‑151 (MQ=255)
aTGGTCAATATCAATAGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTCCACGCCCATGCTATTCCACGCCAGCTcc > 1:1127216/1‑150 (MQ=255)
aTGGTCAATATCAATAGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCa < 3:494337/151‑1 (MQ=255)
tcaatatcaataGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGc > 1:1640415/1‑150 (MQ=255)
aatatcaataGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCGGCTCCACGCAAt > 3:196215/1‑151 (MQ=255)
atcaataGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTg < 1:417455/150‑1 (MQ=255)
tcaataGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCt > 4:315920/1‑151 (MQ=255)
tcaataGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCt > 3:560528/1‑151 (MQ=255)
aataGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTgg > 2:484639/1‑151 (MQ=255)
ataGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGt > 1:1383638/1‑151 (MQ=255)
taGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTc > 2:623819/1‑151 (MQ=255)
taGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTc > 4:387831/1‑151 (MQ=255)
aGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTc < 4:399735/150‑1 (MQ=255)
aGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTc < 3:473646/150‑1 (MQ=255)
cAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCg > 2:1090372/1‑151 (MQ=255)
cAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCg > 2:570006/1‑151 (MQ=255)
aCTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGc > 1:679512/1‑150 (MQ=255)
tCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACg > 2:969338/1‑151 (MQ=255)
tCAGGAAATAGATTTCCAGCGCCTCTTCTTCATCGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACCCCAGCTCCACGCAATTGCTGGTCGACTGCCGCAc > 1:920628/1‑150 (MQ=255)
cAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGt > 1:258643/1‑151 (MQ=255)
aGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGt < 1:49314/150‑1 (MQ=255)
ggAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTc < 2:614471/151‑1 (MQ=255)
gAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCt < 3:387851/151‑1 (MQ=255)
gAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCt > 2:1650751/1‑151 (MQ=255)
aTAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTg < 1:1314178/151‑1 (MQ=255)
aGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTgg < 4:18096/150‑1 (MQ=255)
aGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGc > 2:1245952/1‑151 (MQ=255)
gATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGc > 2:791109/1‑150 (MQ=255)
aTTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCa < 4:398223/150‑1 (MQ=255)
tttCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATc > 2:93370/1‑151 (MQ=255)
ttCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATc > 3:511549/1‑150 (MQ=255)
tCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCa > 2:251488/1‑150 (MQ=255)
tCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCa < 2:1488781/150‑1 (MQ=255)
ccAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCaa > 1:191574/1‑150 (MQ=255)
cAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAata < 1:1118442/151‑1 (MQ=255)
aGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAatat > 2:1120316/1‑151 (MQ=255)
ttcttcATTGCGGACCCCGGTAGCCAGGTGTTGTGGATCCAGAGGTTGTTCGATTGCCTGCTCAATGAGTACACGACCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTAGATTGCCGCAAGTTCTTTGGCATCAATATGACAATc > 4:112354/1‑150 (MQ=255)
ttcttcATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATc > 1:1007005/1‑150 (MQ=255)
tcttcATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCAt < 4:575475/148‑1 (MQ=255)
cttcATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCAt < 3:323164/147‑1 (MQ=255)
ttcATTGCGGATCCCGGTAGCCCGGCGTGGTGGATCTAGCGGTTGTTCGCTTGCTCGCTTAATGAGTACACGCCCCTCCACTACCACGCCAGCTCCTCGCAATTGCTGGTCTATTGCCGCTGGTTCTGTGGCATCAATATGACCATCACt < 1:100065/150‑1 (MQ=255)
ttcATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACtt > 2:1358188/1‑151 (MQ=255)
ttcATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACtt > 1:568823/1‑151 (MQ=255)
cATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACtttt > 2:952481/1‑151 (MQ=255)
cATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACtt < 1:1053816/149‑1 (MQ=255)
aTTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACtttt > 1:1259430/1‑150 (MQ=255)
tGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAg < 4:257418/150‑1 (MQ=255)
gCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGc < 1:1072728/150‑1 (MQ=255)
gCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCg < 2:1198135/151‑1 (MQ=255)
aCCCCGGTAGCCAGGCGTTGTGGATCCAGCGGGTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCa > 1:1527196/1‑150 (MQ=255)
tAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCTGCAAAGAcc > 1:781345/1‑149 (MQ=255)
aGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAgc > 4:241635/1‑151 (MQ=255)
ccAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAgcgc < 1:1120404/151‑1 (MQ=255)
ccAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAgcgc > 2:577187/1‑151 (MQ=255)
cAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAgcgc > 2:334073/1‑150 (MQ=255)
tgtgGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATc > 2:1470265/1‑150 (MQ=255)
ggATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAAc < 3:315939/151‑1 (MQ=255)
ggATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGACCCTGCTCTTCAACGCCAGCTCCAAGCAATTGCTGGTCGATTGCCGCACGTTCTTCGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAAc > 1:1381582/1‑151 (MQ=255)
aTCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGt < 4:110870/151‑1 (MQ=255)
cAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGc > 4:516477/1‑150 (MQ=255)
cAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCt > 2:1644815/1‑151 (MQ=255)
aGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTg > 3:382424/1‑151 (MQ=255)
cGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGt > 1:1700913/1‑150 (MQ=255)
gttgttCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACg > 2:892113/1‑151 (MQ=255)
gttCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCt < 1:1311579/150‑1 (MQ=255)
gttCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTc < 4:323068/151‑1 (MQ=255)
cGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATc > 2:831839/1‑151 (MQ=255)
tGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAgc > 2:1328360/1‑151 (MQ=255)
tGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAgc > 3:327768/1‑151 (MQ=255)
tGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAg < 2:1601876/150‑1 (MQ=255)
gCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAgcg < 2:910170/151‑1 (MQ=255)
cTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAgcgg > 1:1549395/1‑150 (MQ=255)
gCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAgcggcg < 1:1293190/150‑1 (MQ=255)
gCTCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAgcggc < 1:865904/149‑1 (MQ=255)
tCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTAc > 2:807539/1‑151 (MQ=255)
tCAATGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTAc > 1:33579/1‑151 (MQ=255)
aaTGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACtt > 3:127460/1‑151 (MQ=255)
aaTGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACtt > 2:1411754/1‑151 (MQ=255)
aaTGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACtt < 1:547204/151‑1 (MQ=255)
aTGAGTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACttt > 2:597577/1‑151 (MQ=255)
gTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgc > 4:363360/1‑151 (MQ=255)
gTACACGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgc > 4:362958/1‑151 (MQ=255)
acacGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcgc > 3:487889/1‑151 (MQ=255)
acacGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcgc > 2:411300/1‑151 (MQ=255)
acacGCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcgc < 1:772156/151‑1 (MQ=255)
gCCCCTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTGCGCGCCaa > 1:1054350/1‑150 (MQ=255)
cccTGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTGCGCGCCAAACt > 1:133945/1‑151 (MQ=255)
tGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTGCGCGCCAAACTGCg > 2:941862/1‑151 (MQ=255)
tGCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTGCGCGCCAAACTGCg > 4:62058/1‑151 (MQ=255)
gCTCTTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTGCGCGCCAAACTGCg < 2:258685/150‑1 (MQ=255)
ctTCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTGCGCGCCAAACTGCGGTTc > 1:1652301/1‑151 (MQ=255)
tCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACTTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTGCGCGTCAAACTGCGGTTc < 2:1383789/149‑1 (MQ=255)
tCCACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTGCGCGCCAAACTGCGGTTCg < 1:851295/150‑1 (MQ=255)
ccACGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTGCGCGCCAAACTGCGGTTCGt < 1:484562/150‑1 (MQ=255)
cGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTGCGCGCCAAACTGCGGTTCGTCCt < 1:1406564/150‑1 (MQ=255)
cGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTGCGCGCCAAACTGCGGTTCGTCCTg < 1:1090240/151‑1 (MQ=255)
cGCCAGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTGCGCGCCAAACTGCGGTTCGTCCTg < 4:518839/151‑1 (MQ=255)
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TAAAATGGTCAATATCAATAGCCGCGCAACTCAGGAAATAGATTTCCAGCGCCTCTTCTTCATTGCGGACCCCGGTAGCCAGGCGTTGTGGATCCAGCGGTTGTTCGATTGCCTGCTCAATGAGTACACGCCCCTGCTCTTCCACGCCGGCTCCACGCAATTGCTGGTCGATTGCCGCACGTTCTTTGGCATCAATATGACCATCACTTTTAGCGGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTGCGCGCCAAACTGCGGTTCGTCCTG > NC_000913/1929158‑1929452
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
