Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F50 I3 R1
|
143 |
109.6 |
3434427 |
98.5% |
3382910 |
150.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,776,173 |
A→G |
Y196C (TAC→TGC) |
ydiF → |
putative acetyl‑CoA:acetoacetyl‑CoA transferase: alpha subunit/beta subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,776,173 | 0 | A | G | 99.0%
| 385.1
/ ‑4.4
| 102 | Y196C (TAC→TGC) | ydiF | putative acetyl‑CoA:acetoacetyl‑CoA transferase: alpha subunit/beta subunit |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (51/50); total (52/50) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01 |
Only 100 of 102 total aligned reads displayed.
CCACGCCAGCAAGGCGGCAAACTGAATGAAGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTACGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGTTAAGAAAGCCACGCTGCATCCTAAATCTGTCCGTATTCCGGG > NC_000913/1776025‑1776317
|
ccACGCCAGCAAGGCGGCAAACTGAATGAAGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCg > 2:926547/1‑151 (MQ=255)
cGCCAGCAAGGCGGCAAACTGAATGAAGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCa < 1:1187469/151‑1 (MQ=255)
cGCCAGCAAGGCGGCAAACTGAATGAAGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCa < 2:1385959/151‑1 (MQ=255)
cGCCAGCAAGGCGGCAAACTGAATGAAGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCa < 1:139368/151‑1 (MQ=255)
cAAGGCGGCAAACTGAATGAAGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTg > 2:564429/1‑151 (MQ=255)
aGGCGGCAAACTGAATGAAGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATGACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGa > 2:1243201/1‑150 (MQ=255)
gcggcAAACTGAATGAAGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGa > 1:1194633/1‑148 (MQ=255)
gcAAACTGAATGAAGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATg > 2:3520/1‑150 (MQ=255)
cAAACTGAATGAAGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATg > 2:2497/1‑149 (MQ=255)
tgaatgaaGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGAt > 1:538086/1‑151 (MQ=255)
gaatgaaGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGa < 1:290298/149‑1 (MQ=255)
gaatgaaGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGa < 2:1650815/149‑1 (MQ=255)
gaatgaaGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATg > 2:1141055/1‑151 (MQ=255)
gaaGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTAt < 1:761680/150‑1 (MQ=255)
aGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTAtctc > 2:818993/1‑151 (MQ=255)
tCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCg > 1:1466650/1‑150 (MQ=255)
tCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCg > 1:1154964/1‑150 (MQ=255)
cACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGa < 2:254737/150‑1 (MQ=255)
cTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGc > 1:1596379/1‑151 (MQ=255)
aaaGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCa < 1:373258/150‑1 (MQ=255)
aaaGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCa < 2:666993/150‑1 (MQ=255)
aaaGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCAt > 2:253137/1‑151 (MQ=255)
aagaagACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCAtt > 1:1141221/1‑151 (MQ=255)
agaagaCCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTg < 2:1417576/151‑1 (MQ=255)
aagaCCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGt > 2:1116328/1‑151 (MQ=255)
ccTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTAtt < 2:143133/151‑1 (MQ=255)
aTTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGccc < 1:422387/151‑1 (MQ=255)
aTTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGccc < 2:1202639/151‑1 (MQ=255)
ttAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGccc > 2:1705003/1‑150 (MQ=255)
tAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGccc > 2:1107459/1‑149 (MQ=255)
tAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGccc > 2:1543350/1‑149 (MQ=255)
tAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCa < 1:668350/150‑1 (MQ=255)
aaaCTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAg < 1:1067236/150‑1 (MQ=255)
aaaCTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAg < 1:1167907/150‑1 (MQ=255)
aaCTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGGTATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGc < 2:726108/151‑1 (MQ=255)
aaCTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGc > 2:1491507/1‑151 (MQ=255)
aCTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCg > 1:1218503/1‑151 (MQ=255)
ggTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCgg < 1:463218/149‑1 (MQ=255)
ggTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTg < 2:1707007/151‑1 (MQ=255)
cGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACC‑CCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGcaca < 1:113903/151‑1 (MQ=255)
aGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGcaca > 1:1505644/1‑150 (MQ=255)
tGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATaa > 2:745495/1‑150 (MQ=255)
gATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATaa < 1:845643/149‑1 (MQ=255)
gATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAAcg < 1:201474/151‑1 (MQ=255)
gATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAAcg > 1:520718/1‑151 (MQ=255)
tAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAAcggc > 1:1604940/1‑151 (MQ=255)
aaCAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAAcggcg < 2:1212918/151‑1 (MQ=255)
aaCAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAAcggc < 2:821453/150‑1 (MQ=255)
aaCAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCCCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAAcggc > 1:1428967/1‑150 (MQ=255)
aCAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAAcggcgg > 1:1508838/1‑151 (MQ=255)
aaaGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTa < 2:743406/151‑1 (MQ=255)
aaGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTAt < 2:402630/151‑1 (MQ=255)
aaTATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATtgt < 1:1546976/151‑1 (MQ=255)
atatCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATtgt > 1:800977/1‑150 (MQ=255)
atatCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGAGCACAATAACGGCGGGAtt > 1:775956/1‑148 (MQ=255)
atCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGtga < 2:55136/150‑1 (MQ=255)
tctATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTgtggtg > 1:63236/1‑149 (MQ=255)
ctATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGtgat < 1:665076/147‑1 (MQ=255)
tATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGGATTGtgatggttc > 2:474281/1‑147 (MQ=255)
aTTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGc < 2:1169923/150‑1 (MQ=255)
ttACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAAcggcggattttt > 1:928579/1‑135 (MQ=255)
ttACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTGTtttgtt > 1:1304271/1‑142 (MQ=255)
tACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTGGTGTGATTATGCggg > 1:1240949/1‑151 (MQ=255)
tACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATtgtggatgagga > 2:839610/1‑141 (MQ=255)
tACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAg < 2:212049/150‑1 (MQ=255)
tACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGGATTGTGATGATGCAgg > 2:1298258/1‑151 (MQ=255)
aCAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAgg < 1:1491407/150‑1 (MQ=255)
aaGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTTTGATGATGCAGGTg > 1:1501711/1‑149 (MQ=255)
aaGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCCGGGGcc > 1:191608/1‑150 (MQ=255)
cGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTTTGGTGATGCAGGGGgaga > 2:1677791/1‑150 (MQ=255)
gcgcCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATg < 1:1388749/150‑1 (MQ=255)
cgcCAGATATTGCCTTCATTCGCGCTACCGCCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGt < 2:1505741/151‑1 (MQ=255)
cgcCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGt < 2:923183/151‑1 (MQ=255)
cgcCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTACGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGGTGTAGGGGGAGaaaa > 2:1287135/1‑147 (MQ=255)
aGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGGATTGTGATTATGGAGGGGGAGAAAAAgggt > 1:48445/1‑146 (MQ=255)
aGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGCATTGTTATGATGTAGGGGCGGGAAATGGGTa > 1:56126/1‑149 (MQ=255)
atTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGTTAAGaaa < 2:444206/150‑1 (MQ=255)
cTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGGTGATGCAGGGGGAGgaaaaaggtaaaaaa > 1:1060058/1‑134 (MQ=255)
tCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGTTAAGAAAGCCACg < 1:926480/149‑1 (MQ=255)
tCATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGACATGTGGTGGTGTAGGAGGGGAAAATGGGTAAGaaactcaagc > 1:1513718/1‑143 (MQ=255)
gcATTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTTTGATGATGCAGGGGCAGAAAAAGGTTaaaaaa > 2:424508/2‑143 (MQ=255)
aTTCGCGNTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAANNNGNNGTNATGNNNNNNGACGCATNGGNTATTGCCCNGGCNNNGNANAATAACGGCGGGATTGTGAGGATGCGGGGGGAGAAAATGGGGAAGAAAACCACGccg > 2:739231/1‑148 (MQ=255)
aTTCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGTTAAGAAAGCCACGCTGc < 1:290317/151‑1 (MQ=255)
tCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGTTAAGAAAGCCACGCTGCa < 2:369453/150‑1 (MQ=255)
tCGCGCTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGGGGAGAAAATGGGTAAGAAAAACACGCt > 1:66856/1‑147 (MQ=255)
cgcTACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGTTAAGAAAGCCACGCTGCATCCt < 2:1169018/151‑1 (MQ=255)
tACCACCTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGAGTATGAAGGGGGAGAAAATGGGTTAGAAAACCCCGCGGCa > 2:229770/1‑144 (MQ=255)
accaccTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGTTAAGAAAGCCACGCTGCATCCTaaa < 2:1591504/150‑1 (MQ=255)
accaccTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGTTAAGAAAGCCACGCTGCATCCTaaa < 1:533702/150‑1 (MQ=255)
accaccTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGTTAAGAAAGCCACGCTGCATCCTaaa < 2:1596476/150‑1 (MQ=255)
ccaccTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGTTAAGAAAGCCACGCTGCATCCTAAATc < 2:1021669/151‑1 (MQ=255)
ccaccTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGGGCAGAAAAAGGTTAAGAAAACCACGCTGCATCCTaaa > 2:536229/1‑149 (MQ=255)
caccTGCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGTTAAGAAAGCCACGCTGCATCCTAAATCt < 1:179755/151‑1 (MQ=255)
gCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGTTAAGAAAGCCACGCTGCATCCTAAATCTGTc < 1:1087018/149‑1 (MQ=255)
gCGACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGTTAAGAAAGCCACGCTGCATCCTAAATCTGTCCg < 1:761303/151‑1 (MQ=255)
gACAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTTTGATGATGCAGGGGCAGAAAAAGGGTAAGAAAACCACGCCGCATCCTAAATCTGTcc > 2:1173035/1‑148 (MQ=255)
aCAGTGAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGGGCAGAAAAAGGGTAAGAAAAACACGCCGCATCCTAAAACTGttc > 1:1350008/1‑145 (MQ=255)
gAAGGCTGCGCCTCTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGTTAAGAGAGCCACGCTGCATCCTAAATCTGTCCGTATTCCgg < 2:1368258/151‑1 (MQ=255)
gAAGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGGATTGTGATGATGCGGGTGCAGAAAATGGGTAAGAAAACCACGCTCCATCCTATATCTGTCCGTAtttc > 1:156313/1‑147 (MQ=255)
aGGCTGCGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAAAGGTTAAGAAAACCACGCTGCATCCTAAATCTGTCCCTATTCCggg > 2:568172/1‑150 (MQ=255)
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CCACGCCAGCAAGGCGGCAAACTGAATGAAGTCACTAAAGAAGACCTGATTAAACTGGTCGAGTTTGATAACAAAGAATATCTCTATTACAAAGCGATTGCGCCAGATATTGCCTTCATTCGCGCTACCACCTGCGACAGTGAAGGCTACGCCACTTTTGAAGATGAGGTGATGTATCTCGACGCATTGGTTATTGCCCAGGCGGTGCACAATAACGGCGGTATTGTGATGATGCAGGTGCAGAAAATGGTTAAGAAAGCCACGCTGCATCCTAAATCTGTCCGTATTCCGGG > NC_000913/1776025‑1776317
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
