Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F50 I1 R1 141 76.7 2402765 98.4% 2364320 150.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,262,619 C→T G87R (GGA→AGA)  ispE ← 4‑diphosphocytidyl‑2‑C‑methylerythritol kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,262,6190CT100.0% 245.8 / NA 61G87R (GGA→AGA) ispE4‑diphosphocytidyl‑2‑C‑methylerythritol kinase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (29/32);  total (29/32)

AGCCCCATTTCCGCCAGCTCATCCATGCTTAGCCCGCATTGCCAGAGATGATTTAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCCCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCG  >  NC_000913/1262471‑1262764
                                                                                                                                                    |                                                                                                                                                 
aGCCCCATTTCCGCCAGCTCATCCATGCTTAGCCCGCATTGCCAGAGATGATTTAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCg                                                                                                                                                 >  2:916647/1‑151 (MQ=255)
  ccccATTTCCGCCAGCTCATCCATGCTTAGCCCGCATTGCCAGAGATGATTTAATGCCCCCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGt                                                                                                                                                <  2:211249/150‑1 (MQ=255)
    ccATTCCCGCCACCTCACCCATGCTTAGCCCGCATTGCCAGAGATGATTTAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCgg                                                                                                                                             <  1:122771/151‑1 (MQ=255)
     cATTTCCGCCAGCTCATCCATGCTTAGCCCGCATTGCCAGAGATGATTTAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCgg                                                                                                                                             >  1:340213/1‑150 (MQ=255)
             ccAGCTCATCCATGCTTAGCCCGCATTGCCAGAGATGATTTAATGCCACCAGGCCCGTCGCGGCTTTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGccc                                                                                                                                    <  1:300078/151‑1 (MQ=255)
              cAGCTCATCCATGCTTAGCCCGCATTGCCAGAGATGATTTAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCg                                                                                                                                   >  2:196702/1‑151 (MQ=255)
                    aTCCATGCTTAGCCCGCATTGCCAGAGATGATTTAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCt                                                                                                                             >  2:292873/1‑151 (MQ=255)
                     tcaaTGCTGAGCCCGCATTGCCAGAGATGATTAAATGCCCCCAGGACCTTCGCGGAATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCt                                                                                                                             <  1:871168/147‑1 (MQ=255)
                      ccATGCTTAGCCCGCATTGCCAGAGATGATTTAATGCCACCAGGACCGTCGCGGCATTGGATGACCCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGc                                                                                                                           <  1:278580/151‑1 (MQ=255)
                        aTGCTTAGCCCGCATTGCCAGAGATGATTTAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCg                                                                                                                         >  2:979436/1‑151 (MQ=255)
                            ttAGCCCGCATTGCCAGAGATGATTTAATGCCACCAGGCCCGCCGCGGCATTGGATGACCCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCa                                                                                                                       <  2:340216/149‑1 (MQ=255)
                                cccGCATTGCCAGAGATGATTTAATGCCACCAGGACCGTCGCGGCATTGGATGACCCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGtttt                                                                                                                  <  2:682047/150‑1 (MQ=255)
                                cccGCATTGCCAGAGATGATTTAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTtc                                                                                                                 >  1:120980/1‑151 (MQ=255)
                                cccGCATTGCCAGAGATGATTTAATCCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGtt                                                                                                                    <  1:919097/148‑1 (MQ=255)
                                 ccGCATTGCCAGAGATGATTTAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTtca                                                                                                                <  2:673514/151‑1 (MQ=255)
                                    cATTGCCAGAGATGATTTAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTtcatc                                                                                                              >  1:462488/1‑150 (MQ=255)
                                    cATTGCCAGAGATGATTAAATGCCACCAGGCCCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTtcat                                                                                                               <  1:401755/149‑1 (MQ=255)
                                         ccAGAGATGATTTAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAAt                                                                                                        >  1:839444/1‑151 (MQ=255)
                                         ccAGAGATGATTTAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAAt                                                                                                        <  2:822618/151‑1 (MQ=255)
                                         ccAGAGATGATTTAAGGCCCCCAGGCCCGTCGCGGCATTGGATGACCCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATcaacaa                                                                                                         <  1:616305/150‑1 (MQ=255)
                                          cAGAGATGATTTAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATc                                                                                                       >  2:1109380/1‑151 (MQ=255)
                                          cAGAGATGATTTAATGCCACCAGGACCGTCGCGGCACTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATc                                                                                                       >  1:135832/1‑151 (MQ=255)
                                           agagATGATTTAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATc                                                                                                       >  1:390059/1‑150 (MQ=255)
                                                    ttAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTgcgc                                                                                              <  2:264436/150‑1 (MQ=255)
                                                    ttAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGcgcg                                                                                             >  2:1174048/1‑151 (MQ=255)
                                                     tAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGcgcg                                                                                             >  1:473632/1‑150 (MQ=255)
                                                      aaTGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGaa                                                                                           <  1:913025/151‑1 (MQ=255)
                                                       aTGCCACCAGGACCGTCGCGGCATTGGCTGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAAc                                                                                          >  2:651209/1‑151 (MQ=255)
                                                          ccaccaGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGAt                                                                                       >  2:950966/1‑151 (MQ=255)
                                                          ccaccaGGACCGTCGCGGCATGGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACg                                                                                         <  1:1086144/149‑1 (MQ=255)
                                                                    cGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCt                                                                             >  1:122418/1‑151 (MQ=255)
                                                                       cgcgGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTc                                                                           >  1:906259/1‑150 (MQ=255)
                                                                        gcgGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTc                                                                           <  1:821669/149‑1 (MQ=255)
                                                                        gcgGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCAt                                                                         >  1:475674/1‑151 (MQ=255)
                                                                           gcttgggATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATg                                                                        <  2:1099664/144‑1 (MQ=255)
                                                                            cATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTc                                                                     <  2:868229/151‑1 (MQ=255)
                                                                            cATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTc                                                                     <  2:459056/151‑1 (MQ=255)
                                                                               tGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCa                                                                   <  2:985165/150‑1 (MQ=255)
                                                                                ggATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCAc                                                                  <  1:169196/150‑1 (MQ=255)
                                                                                            gccgAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGc                                                     <  1:312347/151‑1 (MQ=255)
                                                                                                     gccgccCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGa                                            <  1:346073/151‑1 (MQ=255)
                                                                                                       cgccCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACg                                          >  1:1010065/1‑151 (MQ=255)
                                                                                                            aTCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAatat                                     >  1:359032/1‑151 (MQ=255)
                                                                                                            aTCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAatat                                     <  1:196700/151‑1 (MQ=255)
                                                                                                                  aaaCGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCAt                               >  2:101751/1‑151 (MQ=255)
                                                                                                                  aaaCGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCAt                               >  1:505987/1‑151 (MQ=255)
                                                                                                                    aCGCTTGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCg                             <  1:362665/151‑1 (MQ=255)
                                                                                                                         tGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCa                          <  2:710764/149‑1 (MQ=255)
                                                                                                                         tGTCAATGCTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCa                          <  1:89087/149‑1 (MQ=255)
                                                                                                                              aTGCTGATATTCGCACCGCTTCTCGTCGGAAGATGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCt                   <  1:244826/151‑1 (MQ=255)
                                                                                                                                 cTGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCa                 >  1:209726/1‑150 (MQ=255)
                                                                                                                                  tGATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAAt               >  1:1070476/1‑151 (MQ=255)
                                                                                                                                   gATATTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAAt               <  1:554130/150‑1 (MQ=255)
                                                                                                                                     tatTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAATGCt            >  1:33535/1‑151 (MQ=255)
                                                                                                                                      atTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCAc                         <  2:15661/137‑1 (MQ=255)
                                                                                                                                      atTCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCAc                         >  1:15661/1‑137 (MQ=255)
                                                                                                                                       ttCGCACCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAATGCTg           >  2:990784/1‑150 (MQ=255)
                                                                                                                                            aCCGCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAATGCTGATGgtg     <  1:160080/151‑1 (MQ=255)
                                                                                                                                               gCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCg  >  2:420758/1‑151 (MQ=255)
                                                                                                                                               gCTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCg  <  2:176658/151‑1 (MQ=255)
                                                                                                                                                cTTCTCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTc   >  1:151873/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
AGCCCCATTTCCGCCAGCTCATCCATGCTTAGCCCGCATTGCCAGAGATGATTTAATGCCACCAGGACCGTCGCGGCATTGGATGAACCACCGCCGAGACCGCCGCCCATCGGCAAACGCTTGTCAATGCTGATATTCGCACCGCTTCCCGTCGGAAGACGCCCGCTGTCTGCCGCAGTTTTCATCAACAATCGCGCTGCGCGAACGATCAGGTTATCTTCATGTTCCACGCCTTCAACGGGCGTTAACAGACGAATATCCCCATCGTCACGAAGCTCAATGCTGATGGTGTCG  >  NC_000913/1262471‑1262764

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A