Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F50 I1 R1 141 76.7 2402765 98.4% 2364320 150.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,512,774 A→G Y374C (TAC→TGC)  ydcS → putative ABC transporter periplasmic binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,512,7740AG100.0% 270.2 / NA 68Y374C (TAC→TGC) ydcSputative ABC transporter periplasmic binding protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (48/20);  total (48/20)

AAGGGTGTAAAGCCAGTCCGTTATTAGGCGAAAAAGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTACATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATAAAAGATGGTGAGTTCTTCTCTATG  >  NC_000913/1512633‑1512921
                                                                                                                                             |                                                                                                                                                   
aaGGGTGTAAAGCCAGTCCGTTATTAGGCGAAAAAGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCAt                                                                                                                                            <  1:268283/151‑1 (MQ=255)
  gggTGTAAAGCCAGTCCGTTATTAGGCGAAAAAGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTa                                                                                                                                          <  1:526779/151‑1 (MQ=255)
    gtgtAAAGCCAGTCCGTTATTAGGCGAAAAAGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATg                                                                                                                                        >  2:460727/1‑151 (MQ=255)
       tAAAGCCAGTCCGTTATTAGGCGAAAAAGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGc                                                                                                                                     >  1:477476/1‑151 (MQ=255)
         aaGCCAGTCCGTTATTAGGCGAAAAAGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCgg                                                                                                                                   >  2:785310/1‑151 (MQ=255)
          aGCCAGTCCGTTATTAGGCGAAAAAGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGt                                                                                                                                  <  2:751411/151‑1 (MQ=255)
                tCCGTTATTAGGCGAAAAAGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTa                                                                                                                             >  1:303592/1‑150 (MQ=255)
                 ccGTTATTAGGCGAAAAAGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCGGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAAc                                                                                                                           >  1:667217/1‑151 (MQ=255)
                   gTTATTAGGCGAAAAAGGTTGTGAAACCAACGGATTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGTTAACtt                                                                                                                         >  2:82038/1‑151 (MQ=255)
                    ttattaGGCGAAAAAGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTc                                                                                                                        >  2:413491/1‑151 (MQ=255)
                     tattaGGCGAAAAAGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTc                                                                                                                        <  1:432577/150‑1 (MQ=255)
                         aGGCGAAAAAGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTgg                                                                                                                   >  1:517015/1‑151 (MQ=255)
                            cGAAAAAGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGt                                                                                                                <  1:661978/151‑1 (MQ=255)
                              aaaaaGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGc                                                                                                              >  2:600323/1‑151 (MQ=255)
                               aaaaGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCt                                                                                                             >  2:1152334/1‑151 (MQ=255)
                                aaaGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCtt                                                                                                            >  2:804104/1‑151 (MQ=255)
                                      tgtgAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGAc                                                                                                      >  1:479919/1‑151 (MQ=255)
                                       gtgAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACg                                                                                                     >  1:1131965/1‑151 (MQ=255)
                                         gAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGt                                                                                                    >  1:227278/1‑150 (MQ=255)
                                         gAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGt                                                                                                    >  1:683123/1‑150 (MQ=255)
                                         gAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGt                                                                                                    >  1:1123596/1‑150 (MQ=255)
                                         gAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTa                                                                                                   <  1:460724/151‑1 (MQ=255)
                                           aaCCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACg                                                                                                 >  2:438782/1‑151 (MQ=255)
                                           aaCCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGGGCTTTATGACGTACg                                                                                                 >  1:74760/1‑151 (MQ=255)
                                                aCGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTg                                                                                            >  2:994760/1‑151 (MQ=255)
                                                     tttAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGtt                                                                                       >  2:555776/1‑151 (MQ=255)
                                                            aTTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAAc                                                                                >  2:691838/1‑151 (MQ=255)
                                                             tttCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACg                                                                               >  2:304941/1‑151 (MQ=255)
                                                                cGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGtct                                                                            >  1:577768/1‑151 (MQ=255)
                                                                cGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGtc                                                                             <  2:869607/150‑1 (MQ=255)
                                                                 gACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGtctc                                                                           <  1:447911/151‑1 (MQ=255)
                                                                 gACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGtctc                                                                           >  2:872380/1‑151 (MQ=255)
                                                                   cAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTcgc                                                                         >  1:879060/1‑151 (MQ=255)
                                                                    aaaaTCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTcgcg                                                                        >  2:144296/1‑151 (MQ=255)
                                                                     aaaTCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCgg                                                                       >  2:911047/1‑151 (MQ=255)
                                                                     aaaTCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCgg                                                                       >  2:442316/1‑151 (MQ=255)
                                                                      aaTCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGt                                                                      >  1:648784/1‑151 (MQ=255)
                                                                       aTCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGtt                                                                     >  1:200889/1‑151 (MQ=255)
                                                                        tCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTg                                                                    >  2:821688/1‑151 (MQ=255)
                                                                             ttCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACgg                                                               >  2:784828/1‑151 (MQ=255)
                                                                             ttCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACgg                                                               >  1:699627/1‑151 (MQ=255)
                                                                             ttCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACgg                                                               >  2:493927/1‑151 (MQ=255)
                                                                                  gAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACg                                                          >  2:609370/1‑151 (MQ=255)
                                                                                   aaaaCGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACg                                                          >  1:13740/1‑150 (MQ=255)
                                                                                    aaaCGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTg                                                        >  2:475909/1‑151 (MQ=255)
                                                                                       cGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTgcgc                                                     <  2:355327/151‑1 (MQ=255)
                                                                                                cAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGt                                                >  2:1116321/1‑147 (MQ=255)
                                                                                                cAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGt                                                >  2:258054/1‑147 (MQ=255)
                                                                                                 aGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATg                                           >  1:506076/1‑151 (MQ=255)
                                                                                                 aGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATg                                           <  2:1031429/151‑1 (MQ=255)
                                                                                                          cAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTGTGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGt                                   >  1:168757/1‑150 (MQ=255)
                                                                                                          cAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTa                                  <  1:609361/151‑1 (MQ=255)
                                                                                                                   tCCCTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATa                          <  2:1199429/150‑1 (MQ=255)
                                                                                                                    cccTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATaa                         <  2:945509/150‑1 (MQ=255)
                                                                                                                    cccTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATaa                         <  1:876853/150‑1 (MQ=255)
                                                                                                                    cccTACAGTCGACGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGGGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGATGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATaa                         >  1:503532/1‑150 (MQ=255)
                                                                                                                      cTACAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATaaa                        >  2:354548/1‑149 (MQ=255)
                                                                                                                        aCAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATAAAAg                      <  2:886559/149‑1 (MQ=255)
                                                                                                                         cAGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATAAAAGATg                   >  2:1014805/1‑151 (MQ=255)
                                                                                                                          aGTCGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATAAAAGATgg                  >  1:1033080/1‑151 (MQ=255)
                                                                                                                             cGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATAAAAGATGGTGa               <  1:144294/151‑1 (MQ=255)
                                                                                                                             cGCTGGACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATAAAAGATGGTGa               <  1:459894/151‑1 (MQ=255)
                                                                                                                                 ggACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATAAAAGATGGTGAGttc           <  1:3447/151‑1 (MQ=255)
                                                                                                                                 ggACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATAAAAGATGGTGAGttc           >  2:989208/1‑151 (MQ=255)
                                                                                                                                  gACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATAAAAGATGGTGAGttct          <  2:899160/151‑1 (MQ=255)
                                                                                                                                  gACGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATAAAAGATGGTGAGttct          >  1:795932/1‑151 (MQ=255)
                                                                                                                                    cGCAGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATAAAAGATGGTGAGttcttc        >  1:628736/1‑151 (MQ=255)
                                                                                                                                       aGGATTGCATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATAAAAGATGGTGAGTTCTTctct     <  2:1057346/151‑1 (MQ=255)
                                                                                                                                          attgcattgcCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATAAAAGATGGTGAGTTCTTCTCTATg  <  1:795934/151‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                                   
AAGGGTGTAAAGCCAGTCCGTTATTAGGCGAAAAAGGTTGTGAAACCAACGGTTTTAACTATTTCGACAAAATCGCCTTCTGGAAAACGCCTATAGCAGAAGGGGGCAAGTTTGTTCCCTACAGTCGCTGGACGCAGGATTACATTGCCATTATGGGCGGTCGCTAACTTCGCTGGGGTGCTTTATGACGTACGCAGTGGAGTTTGACAACGTCTCGCGGTTGTACGGTGACGTGCGCGCAGTAGATGGCGTCAGTATTGCGATAAAAGATGGTGAGTTCTTCTCTATG  >  NC_000913/1512633‑1512921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A