Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F50 I1 R1 141 76.7 2402765 98.4% 2364320 150.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,337,019 G→A A801V (GCC→GTC)  gyrA ← DNA gyrase (type II topoisomerase), subunit A

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,337,0190GA100.0% 276.5 / NA 68A801V (GCC→GTC) gyrADNA gyrase (type II topoisomerase), subunit A
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (35/33);  total (35/33)

ATCCAGATCTTCCTCGTCAACCGGTTCAGCAACACGTTGCAGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGGCATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTGGGTATTCCGCCACTGCGGTACGTTTACCGT  >  NC_000913/2336874‑2337166
                                                                                                                                                 |                                                                                                                                                   
aTCCAGATCTTCCTCGTCAACCGGTTCAGCAACACGTTGCAGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCg                                                                                                                                                <  1:205101/151‑1 (MQ=255)
  ccAGATCTTCCTCGTCAACCGGTTCAGCAACACGTTGCAGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGt                                                                                                                                              <  2:99995/151‑1 (MQ=255)
   cAGATCTTCCTCGTCAACCGGTTCAGCAACACGTTGCAGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTg                                                                                                                                             <  2:633407/151‑1 (MQ=255)
    aGATCTTCCTCGTCAACCGGTTCAGCAACACGTTGCAGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTg                                                                                                                                             >  2:931996/1‑150 (MQ=255)
      aTCTTCCTCGTCAACCGGTTCAGCAACACGTTGCAGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGatc                                                                                                                                          >  2:906578/1‑151 (MQ=255)
              cGTCAACCGGTTCAGCAACACGTTGCAGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATg                                                                                                                                    <  2:250664/149‑1 (MQ=255)
                    ccGGTTCAGCAACACGTTGCAGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTc                                                                                                                            <  2:152490/151‑1 (MQ=255)
                         tCAGCAACACGTTGCAGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAg                                                                                                                        <  2:845615/150‑1 (MQ=255)
                            gCAACACGTTGCAGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCAt                                                                                                                    <  2:1001893/151‑1 (MQ=255)
                            gCAACACGTTGCAGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCAt                                                                                                                    >  2:1171686/1‑151 (MQ=255)
                              aaCACGTTGCAGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCt                                                                                                                  <  2:143100/151‑1 (MQ=255)
                               acacGTTGCAGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCt                                                                                                                  >  2:17752/1‑150 (MQ=255)
                                cacGTTGCAGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTAc                                                                                                                <  1:946855/151‑1 (MQ=255)
                                  cGTTGCAGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCt                                                                                                              <  2:197048/151‑1 (MQ=255)
                                     tGCAGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGt                                                                                                            >  1:465576/1‑150 (MQ=255)
                                        aGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACcg                                                                                                        >  2:212863/1‑151 (MQ=255)
                                        aGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACcg                                                                                                        >  1:910429/1‑151 (MQ=255)
                                        aGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACcg                                                                                                        <  1:784838/151‑1 (MQ=255)
                                         gACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACcgc                                                                                                       <  2:878477/151‑1 (MQ=255)
                                           cccACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCATACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCgcgc                                                                                                     >  2:979961/1‑151 (MQ=255)
                                             cACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGcc                                                                                                    >  1:334818/1‑150 (MQ=255)
                                                 aCGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCcaacaa                                                                                               <  1:1046079/151‑1 (MQ=255)
                                                     tttCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTa                                                                                            <  1:28799/150‑1 (MQ=255)
                                                     tttCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTa                                                                                            >  2:550961/1‑150 (MQ=255)
                                                     tttCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTa                                                                                            >  1:597557/1‑150 (MQ=255)
                                                      ttCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTaa                                                                                           >  1:662478/1‑150 (MQ=255)
                                                       tCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAAc                                                                                         >  2:1119781/1‑151 (MQ=255)
                                                             tCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGtt                                                                                     <  2:13484/149‑1 (MQ=255)
                                                             tCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGt                                                                                      <  2:515246/148‑1 (MQ=255)
                                                             tCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTa                                                                                    <  1:392692/150‑1 (MQ=255)
                                                                 cAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTc                                                                               >  2:306680/1‑151 (MQ=255)
                                                                 cAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTc                                                                               <  2:191193/151‑1 (MQ=255)
                                                                    tACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGt                                                                            >  2:318772/1‑151 (MQ=255)
                                                                        gATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAAcc                                                                        <  2:761570/151‑1 (MQ=255)
                                                                        gATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAAcc                                                                        <  2:386843/151‑1 (MQ=255)
                                                                             ggATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGAt                                                                   <  2:812399/151‑1 (MQ=255)
                                                                                 cACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGga                                                                <  1:397236/150‑1 (MQ=255)
                                                                                     cccTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATa                                                            >  2:608060/1‑150 (MQ=255)
                                                                                      ccTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAAc                                                          >  1:128046/1‑151 (MQ=255)
                                                                                        tGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGTTGATCATAATGATCTGGTCGCAGTCATCTACCTGTGTCGCGCCAACAACTAAACCGAGACGTTCGGTATCCGTGATGga                                                                <  1:828042/143‑1 (MQ=255)
                                                                                        tGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAAccc                                                        >  2:424220/1‑151 (MQ=255)
                                                                                             gtTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCttt                                                    <  1:383093/150‑1 (MQ=255)
                                                                                               tACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTtcgt                                                 >  2:135828/1‑151 (MQ=255)
                                                                                               tACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTtcg                                                  <  1:1037415/150‑1 (MQ=255)
                                                                                                  ggCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGc                                              >  2:909460/1‑151 (MQ=255)
                                                                                                  ggCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGc                                              >  2:962747/1‑151 (MQ=255)
                                                                                                   gCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGc                                              >  1:731230/1‑150 (MQ=255)
                                                                                                       aCGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCAcgcg                                         <  1:471749/151‑1 (MQ=255)
                                                                                                        cGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCAcgcg                                         >  1:639231/1‑150 (MQ=255)
                                                                                                           tGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACtt                                     >  2:586959/1‑151 (MQ=255)
                                                                                                               gATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACttggtt                                 <  2:983155/151‑1 (MQ=255)
                                                                                                               gATTTCCGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACttggt                                  <  2:1200220/150‑1 (MQ=255)
                                                                                                                   tCCGAAACGAGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTggg                              >  2:840212/1‑150 (MQ=255)
                                                                                                                    ccGAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTGGGt                             >  1:102238/1‑150 (MQ=255)
                                                                                                                      gAAACGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTCACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTGGGTAtt                          >  2:316286/1‑151 (MQ=255)
                                                                                                                       aaaCGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTGGGTATTc                         >  1:1124067/1‑151 (MQ=255)
                                                                                                                        aaCGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTGGGTATTcc                        <  1:886897/151‑1 (MQ=255)
                                                                                                                        aaCGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTGGGTATTcc                        >  2:9172/1‑151 (MQ=255)
                                                                                                                        aaCGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTGGGTATTcc                        >  1:1134976/1‑151 (MQ=255)
                                                                                                                         aCGCGAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTGGGTATTCCg                       >  2:545366/1‑151 (MQ=255)
                                                                                                                          cgcgAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTGGGTATTCCGc                      >  1:1073911/1‑151 (MQ=255)
                                                                                                                           gcgAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTGGGTATTCCGcc                     >  2:469026/1‑151 (MQ=255)
                                                                                                                           gcgAGTACGTACCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTGGGTATTCCGcc                     >  2:699848/1‑151 (MQ=255)
                                                                                                                                   gtacCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTGGGTATTCCGCCACTGCGGt             <  1:853727/151‑1 (MQ=255)
                                                                                                                                     acCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTGGGTATTCCGCCACTGCGGTa            <  2:128048/150‑1 (MQ=255)
                                                                                                                                     acCAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTGGGTATTCCGCCACTGCGGTAc           <  2:371520/151‑1 (MQ=255)
                                                                                                                                      ccAGCGTACCGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTGGGTATTCCGCCACTGCGGTACg          <  2:1031991/151‑1 (MQ=255)
                                                                                                                                              ccGACATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTGGGTATTCCGCCACTGCGGTACGTTTACCGt  >  2:884829/1‑151 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
ATCCAGATCTTCCTCGTCAACCGGTTCAGCAACACGTTGCAGACCCACTACGTTTTCATCTTCCGCAGTACGGATGAGGATCACGCCCTGGGTGTTACGGCCCACGATGCTGATTTCCGAAACGCGAGTACGTACCAGCGTACCGGCATCGGTGATCATCATGATCTGGTCGCAGTCATCTACCTGTACCGCGCCAACAACTAAACCGTTACGTTCGGTAACCTTGATGGAGATAACCCCTTTCGTCGCACGCGACTTGGTTGGGTATTCCGCCACTGCGGTACGTTTACCGT  >  NC_000913/2336874‑2337166

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A