Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F50 I1 R1
|
141 |
76.7 |
2402765 |
98.4% |
2364320 |
150.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,482,332 |
T→C |
A336A (GCA→GCG) |
emrK ← |
multidrug resistance efflux pump membrane fusion protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,482,332 | 0 | T | C | 100.0%
| 289.2
/ NA
| 76 | A336A (GCA→GCG) | emrK | multidrug resistance efflux pump membrane fusion protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (41/35); total (41/35) |
GTCCATTATGCGAAATAATGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGTAATAAGGAGAACGCATTGCCGGTTCCC > NC_000913/2482184‑2482479
|
gTCCATTATGCGAAATAATGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGc > 2:274227/1‑151 (MQ=255)
gTCCATTATGCGAAATAATGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGc > 2:374033/1‑151 (MQ=255)
gTCCATTATGCGAAATAATGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGc < 2:250892/151‑1 (MQ=255)
ccATTATGCGAAATAATGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCt < 2:431269/150‑1 (MQ=255)
cATTATGCGAAATAATGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGt > 2:134653/1‑151 (MQ=255)
aTTATGCGAAATAATGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTc < 1:230881/151‑1 (MQ=255)
tATGCGAAATAATGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCa > 1:648262/1‑150 (MQ=255)
aTGCGAAATAATGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATc > 1:901431/1‑151 (MQ=255)
aTGCGAAATAATGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATc < 1:915371/151‑1 (MQ=255)
aTGCGAAATAATGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATc > 2:1071652/1‑151 (MQ=255)
cGAAATAATGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGAt < 2:644544/151‑1 (MQ=255)
gAAATAATGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGAt > 1:977883/1‑150 (MQ=255)
gAAATAATGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGAt > 1:1108667/1‑150 (MQ=255)
gAAATAATGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGATCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGAt > 1:864691/1‑150 (MQ=255)
aaaTAATGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATa > 1:1083890/1‑150 (MQ=255)
aataatGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATaaa < 1:816704/151‑1 (MQ=255)
aataatGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATaa > 2:654105/1‑150 (MQ=255)
aatGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCa < 1:922218/151‑1 (MQ=255)
gCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGc < 2:668336/151‑1 (MQ=255)
gCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGc > 2:1141994/1‑151 (MQ=255)
cTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGc > 1:200811/1‑150 (MQ=255)
ttCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTcc > 1:144808/1‑151 (MQ=255)
ggACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGtt < 2:167101/151‑1 (MQ=255)
tCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGAt > 2:301928/1‑151 (MQ=255)
cGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATc > 1:287690/1‑151 (MQ=255)
aTAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCaa < 2:565827/151‑1 (MQ=255)
tAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCa > 2:77277/1‑149 (MQ=255)
tAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCa > 1:267849/1‑149 (MQ=255)
aaCTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAag < 1:72595/150‑1 (MQ=255)
aCTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAagag < 2:146113/151‑1 (MQ=255)
tAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAgaga > 1:1127177/1‑150 (MQ=255)
aaaGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAgaga < 1:903433/149‑1 (MQ=255)
aaaGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAgaga < 1:978618/149‑1 (MQ=255)
aaGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAAc > 1:528823/1‑151 (MQ=255)
aGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACt > 2:325734/1‑151 (MQ=255)
aGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACt < 2:430035/151‑1 (MQ=255)
tACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCa < 1:902696/149‑1 (MQ=255)
tACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCa < 2:949010/149‑1 (MQ=255)
tACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAAc > 2:302383/1‑151 (MQ=255)
aCTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAAc < 1:525948/150‑1 (MQ=255)
tGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCgg > 2:211964/1‑151 (MQ=255)
ggTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGt < 2:1083917/151‑1 (MQ=255)
gTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGt > 1:553730/1‑150 (MQ=255)
gTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGt > 1:4682/1‑150 (MQ=255)
taAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTacac > 1:1054499/1‑151 (MQ=255)
cGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGa < 1:1177462/151‑1 (MQ=255)
gCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAAc < 2:1038716/151‑1 (MQ=255)
aTGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACg > 2:159037/1‑150 (MQ=255)
gAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGAttt < 2:645216/151‑1 (MQ=255)
gTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGa < 2:839646/151‑1 (MQ=255)
cACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGAt < 1:1092416/150‑1 (MQ=255)
cACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGAt < 2:73135/150‑1 (MQ=255)
ttGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGtt > 2:606427/1‑151 (MQ=255)
aGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCt > 1:1038762/1‑151 (MQ=255)
aGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCt > 1:983046/1‑151 (MQ=255)
gCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTg < 2:780355/151‑1 (MQ=255)
cAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTc < 2:680368/151‑1 (MQ=255)
tCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCAt > 2:379132/1‑151 (MQ=255)
cGGCAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTtgtg < 1:12525/147‑1 (MQ=255)
cAATGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGta > 1:1198101/1‑150 (MQ=255)
aaTGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGtaat < 1:179053/151‑1 (MQ=255)
aaTGTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGtaat > 2:359960/1‑151 (MQ=255)
gTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGtaataa < 2:49154/150‑1 (MQ=255)
gTCTTCGTTCTTCGTATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGtaataa < 1:28725/150‑1 (MQ=255)
tcttcgttcttcgtATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGTAATAAgg > 1:902229/1‑151 (MQ=255)
cttcgttcttcgtATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGTAATAAgg > 1:79346/1‑150 (MQ=255)
tcgttcttcgtATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGTAATAAgg < 1:749675/148‑1 (MQ=255)
cgttcttcgtATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGTAATAAGgaga > 1:94977/1‑150 (MQ=255)
gttcttcgtATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGTAATAAGGAGAAc < 2:803923/151‑1 (MQ=255)
ttcttcgtATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGTAATAAGGAGAACg > 1:1191476/1‑151 (MQ=255)
ttcttcgtATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGTAATAAGGAGAACg > 1:852756/1‑151 (MQ=255)
gtATCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGTAATAAGGAGAACGCATTGc > 2:827031/1‑151 (MQ=255)
aTCAATAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGTAATAAGGAGAACGCATTGcc < 2:490896/150‑1 (MQ=255)
aaTAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGTAATAAGGAGAACGCATTGCCGGtt < 2:782514/151‑1 (MQ=255)
tAGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGTAATAAGGAGAACGCATTGCCGGTTcc > 2:508016/1‑151 (MQ=255)
aGTCGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGTAATAAGGAGAACGCATTGCCGGTTccc > 1:586237/1‑151 (MQ=255)
|
GTCCATTATGCGAAATAATGTTGCTAATTTCTTTTTCTATCGGACTGGTATCGATAACTAAAGCCTTACTGGTATAAGCCGGCATGGAGGTCACGGTTGAAGCCAGCTCAGGCATCTCGGCAATGTCTTCGTTCTTCGTATCAATAGTTGCTGTCATCGATAAACCAATACGCAAGGGGTGTTCCATGAGTTCTTTTGGATCAAGAGAAACTTCAACCGGTACACGCTGAACGATTTTGATCCAGTTCCCTGTCGCATTTTGTGCAGGTAATAAGGAGAACGCATTGCCGGTTCCC > NC_000913/2482184‑2482479
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
