Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F50 I1 R1 141 76.7 2402765 98.4% 2364320 150.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,530,522 T→C S238G (AGC→GGC)  zipA ← FtsZ stabilizer

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,530,5220TC100.0% 308.8 / NA 84S238G (AGC→GGC) zipAFtsZ stabilizer
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (39/45);  total (39/45)

CAGCATCAGCTTGAAGTTCTGCAGCTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCTGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGTTCATGATAATCACCGCTTCTTTGCGCTT  >  NC_000913/2530376‑2530669
                                                                                                                                                  |                                                                                                                                                   
cagcaTCAGCTTGAAGTTCTGCAGCTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCa                                                                                                                                                 <  2:66286/151‑1 (MQ=255)
   caTCAGCTTGAAGTTCTGCAGCTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATcc                                                                                                                                              <  2:617635/151‑1 (MQ=255)
    aTCAGCTTGAAGTTCTGCAGCTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCg                                                                                                                                             <  1:571793/151‑1 (MQ=255)
      cAGCTTGAAGTTCTGCAGCTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCggg                                                                                                                                           >  1:139102/1‑151 (MQ=255)
        gCTTGAAGTTCTGCAGCTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCt                                                                                                                                         >  1:46099/1‑151 (MQ=255)
          ttGAAGTTCTGCAGCTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTa                                                                                                                                        >  2:426253/1‑150 (MQ=255)
           tGAAGTTCTGCAGCTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGACTAGGGAAATCCTTCATTGCATGATCAAAGGTTCCCGGATTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGACGCCATCCGGGCTa                                                                                                                                        >  1:63556/1‑149 (MQ=255)
               gTTCTGCAGCTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGa                                                                                                                                  <  1:178677/151‑1 (MQ=255)
                ttCTGCAGCTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGAc                                                                                                                                 >  1:1029187/1‑151 (MQ=255)
                   tGCAGCTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGAt                                                                                                                              >  1:240719/1‑151 (MQ=255)
                    gCAGCTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGa                                                                                                                               <  2:603534/149‑1 (MQ=255)
                    gCAGCTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGa                                                                                                                               <  1:819435/149‑1 (MQ=255)
                     cAGCTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATgg                                                                                                                            >  1:811255/1‑151 (MQ=255)
                      aGCTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGt                                                                                                                           >  2:826188/1‑151 (MQ=255)
                        cTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTa                                                                                                                          >  2:986646/1‑150 (MQ=255)
                        cTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTa                                                                                                                          >  1:1142087/1‑150 (MQ=255)
                          cGTCACCGTAAGACGGTAGCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTaaa                                                                                                                        <  1:8155/150‑1 (MQ=255)
                          cGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTaa                                                                                                                         <  2:262838/149‑1 (MQ=255)
                          cGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAat                                                                                                                       <  2:222898/151‑1 (MQ=255)
                           gTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAata                                                                                                                      <  2:596099/151‑1 (MQ=255)
                              aCCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTc                                                                                                                   <  2:563360/151‑1 (MQ=255)
                                     gACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGc                                                                                                            >  1:1034841/1‑151 (MQ=255)
                                        ggTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCa                                                                                                          >  2:219574/1‑150 (MQ=255)
                                         gTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCaaa                                                                                                        <  2:1097101/151‑1 (MQ=255)
                                           aCCTGCATAAAGATATTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCaaaaa                                                                                                      <  1:693291/151‑1 (MQ=255)
                                            ccTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAAt                                                                                                     <  1:4558/151‑1 (MQ=255)
                                            ccTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAAt                                                                                                     <  1:282708/151‑1 (MQ=255)
                                             cTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATg                                                                                                    >  2:846539/1‑151 (MQ=255)
                                               gCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATg                                                                                                    <  2:579903/149‑1 (MQ=255)
                                               gCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATg                                                                                                    <  1:514001/149‑1 (MQ=255)
                                               gCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATg                                                                                                    <  1:1056432/149‑1 (MQ=255)
                                               gCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATg                                                                                                    <  1:893588/149‑1 (MQ=255)
                                                      gATAGTGACCCCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCt                                                                                           <  2:504251/151‑1 (MQ=255)
                                                      gATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCt                                                                                           <  1:1022570/151‑1 (MQ=255)
                                                       aTAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCtt                                                                                          <  2:700917/151‑1 (MQ=255)
                                                         aGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCttgt                                                                                        >  1:904677/1‑151 (MQ=255)
                                                         aGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCttg                                                                                         <  2:1005134/150‑1 (MQ=255)
                                                           tGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCttgttg                                                                                      >  2:528516/1‑151 (MQ=255)
                                                            gACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCttgttg                                                                                      >  2:380883/1‑150 (MQ=255)
                                                             acacCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGa                                                                                     >  2:949573/1‑150 (MQ=255)
                                                              cacCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAAt                                                                                   <  1:1072039/151‑1 (MQ=255)
                                                                cccGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATg                                                                                  <  2:1062885/150‑1 (MQ=255)
                                                                 ccGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCt                                                                                <  1:169475/151‑1 (MQ=255)
                                                                  cGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTg                                                                               >  2:235169/1‑151 (MQ=255)
                                                                  cGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTg                                                                               >  1:317916/1‑151 (MQ=255)
                                                                    gAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGtt                                                                             >  1:1100439/1‑151 (MQ=255)
                                                                        agtGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTa                                                                            >  2:741864/1‑148 (MQ=255)
                                                                            aaaTCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGc                                                                      >  2:594795/1‑150 (MQ=255)
                                                                              aTCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGt                                                                   >  1:993049/1‑151 (MQ=255)
                                                                              aTCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGt                                                                   >  1:493234/1‑151 (MQ=255)
                                                                                ccTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGtt                                                                  <  1:1121556/150‑1 (MQ=255)
                                                                                  ttCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCAc                                                               >  1:45965/1‑151 (MQ=255)
                                                                                   tCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCAcc                                                              >  1:75888/1‑151 (MQ=255)
                                                                                    cATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCg                                                             >  2:522592/1‑151 (MQ=255)
                                                                                         cAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTa                                                         <  1:745666/150‑1 (MQ=255)
                                                                                          aGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCATCGttt                                                          >  1:1191663/1‑148 (MQ=255)
                                                                                            gATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTc                                                     <  1:359670/151‑1 (MQ=255)
                                                                                             aTCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCg                                                    <  1:375180/151‑1 (MQ=255)
                                                                                               cAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGc                                                   <  2:45965/150‑1 (MQ=255)
                                                                                                    gTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGt                                             <  1:647964/151‑1 (MQ=255)
                                                                                                     ttCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTg                                            >  2:916659/1‑151 (MQ=255)
                                                                                                     ttCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTg                                            >  2:965534/1‑151 (MQ=255)
                                                                                                       cccGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGAt                                          <  1:426250/151‑1 (MQ=255)
                                                                                                        ccGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATg                                         >  2:747686/1‑151 (MQ=255)
                                                                                                           gTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATgcgc                                      >  1:306722/1‑151 (MQ=255)
                                                                                                            tttCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGcgcc                                     >  2:913671/1‑151 (MQ=255)
                                                                                                             ttCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGcgcc                                     <  2:1047637/150‑1 (MQ=255)
                                                                                                               cACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCcgcg                                  <  1:238869/151‑1 (MQ=255)
                                                                                                               cACCATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCcgcg                                  >  1:876766/1‑151 (MQ=255)
                                                                                                                 ccATATTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGAc                                >  1:333094/1‑151 (MQ=255)
                                                                                                                   atatTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGt                              >  2:559768/1‑151 (MQ=255)
                                                                                                                   atatTCGCCAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGt                              <  2:1076282/151‑1 (MQ=255)
                                                                                                                   atatTCGCCAGGCTGAATAACGCAGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGt                              >  2:315865/1‑151 (MQ=255)
                                                                                                                          ccAGGCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGTTCATGAt                       <  2:834404/151‑1 (MQ=255)
                                                                                                                              gCTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGTTCATGATAATc                   <  1:52824/151‑1 (MQ=255)
                                                                                                                               cTGAATAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGTTCATGATAATc                   >  1:736328/1‑150 (MQ=255)
                                                                                                                                  aaTAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGtt                             >  2:733816/1‑137 (MQ=255)
                                                                                                                                  aaTAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGtt                             <  1:733806/137‑1 (MQ=255)
                                                                                                                                  aaTAACGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGTTCATGATAATCACCg               <  2:509880/151‑1 (MQ=255)
                                                                                                                                     aaCGCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGTTCATGATAATCACCGct             <  1:322127/150‑1 (MQ=255)
                                                                                                                                        gCCGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGTTCATGATAATCACCGcttctt         <  1:420193/151‑1 (MQ=255)
                                                                                                                                          cGGGCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGTTCATGATAATCACCGCTTCTTTg       <  2:904692/151‑1 (MQ=255)
                                                                                                                                           gggCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGTTCATGATAATCACCGCTTCTTTgc      <  2:100762/151‑1 (MQ=255)
                                                                                                                                            ggCCGCCGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGTTCATGATAATCACCGCTTCTTTgcg     <  1:915428/151‑1 (MQ=255)
                                                                                                                                               cgccgcCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGTTCATGATAATCACCGCTTCTTTGCGCtt  >  2:883057/1‑151 (MQ=255)
                                                                                                                                               cgccgcCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGTTCATGATAATCACCGCTTCTTTGCGCtt  >  1:449535/1‑151 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
CAGCATCAGCTTGAAGTTCTGCAGCTCGTCACCGTAAGACGGTACCTGCATAAAGATAGTGACACCCGGAGTAGTGAAATCCTTCATTTCAGGATCAAAGGTTCCCGGTTTCACCATATTCGCCAGGCTGAATAACGCCGGGCCGCTGCCATCCGGGCTAAGATGACGATGGTAAATATTCATATCGCCAAAAATGAAGCCCGCTTGTTGAATGCTGTTAAGAAGCAGTTCACCGTTTAGCTCGCTACCGTGATGCGCCGCGACGTTCATGATAATCACCGCTTCTTTGCGCTT  >  NC_000913/2530376‑2530669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A