Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F50 I2 R1 139 64.5 2139856 92.7% 1983646 149.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,531,374 (T)6→5 intergenic (‑141/‑89) zipA ← / → cysZ FtsZ stabilizer/sulfate transporter, sulfite inhibited

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,531,3690T.100.0% 261.1 / NA 54intergenic (‑136/‑94)zipA/cysZFtsZ stabilizer/sulfate transporter, sulfite inhibited
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (23/31);  total (23/31)

AATCCTGCATCATTATATTCTCTGTTGTTCTAACACCTTGCCACCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTGTTTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTCACATCTGCCCCACGCAGCGGTTTTTACTATTTTGCGC  >  NC_000913/2531221‑2531514
                                                                                                                                                    |                                                                                                                                                 
aaTCCTGCATCATTATATTCTCTGTTGTTCTAACACCTTGCCACCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTGttt                                                                                                                                                 <  1:125192/151‑1 (MQ=255)
aaTCCTGCATCATTATATTCTCTGTTGTTCTAACACCTTGCCACCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTGttt                                                                                                                                                 >  2:1069777/1‑151 (MQ=255)
 aTCCTGCATCATTATATTCTCTGTTGTTCTAACACCTTGCCACCACGGCAAGCATTTACTCACTAAGAGTATTTGCCTATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTGtttt                                                                                                                                                <  2:540017/151‑1 (MQ=255)
 aTCCTGCATCATTATATTCTCTGTTGTTCTAACACCTTGCCACCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTGtttt                                                                                                                                                >  1:652300/1‑151 (MQ=255)
   ccTGCATCATTATATTCTCTGTTGTTCTAACACCTTGCCACCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTGttttt                                                                                                                                               <  2:400093/150‑1 (MQ=255)
      gCATCATTATATTCTCTGTTGTTCTAACACCTTGCCACCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTGtttttcga                                                                                                                                            <  1:858631/150‑4 (MQ=255)
      gCATCATTATATTCTCTGTTGTTCTAACACCTTGCCACCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTGtttttc                                                                                                                                              <  2:578511/148‑2 (MQ=255)
      gCATCATTATATTCTCTGTTGTTCTAACACCTTGCCACCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTGtttttc                                                                                                                                              >  1:578543/1‑147 (MQ=255)
              atatTCTCTGTTGTTCTAACACCTTGCCACCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCt                                                                                                                                  >  1:288117/1‑151 (MQ=255)
              atatTCTCTGTTGTTCTAACACCTTGCCACCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCt                                                                                                                                  >  1:64240/1‑151 (MQ=255)
                 ttCTCTGTTGTTCTAACACCTTGCCACCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAAc                                                                                                                               >  1:79014/1‑151 (MQ=255)
                   ctctGTTGTTCTAACACCTTGCCACCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTg                                                                                                                             >  1:637815/1‑151 (MQ=255)
                       gttgttCTAACACCTTGCCACCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTcaa                                                                                                                         <  2:49495/151‑3 (MQ=255)
                         tgttCTAACACCTTGCCACCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCAt                                                                                                                        <  1:183394/150‑1 (MQ=255)
                         tgttCTAAAAGCTTGCCATCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCAAAAAGATAGATGAAATAGTGATTATTGCTG‑TTTTTCGAACATATCCTAACTGGACAtt                                                                                                                       >  2:670612/1‑151 (MQ=255)
                               aaCACCTTGCCACCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCa                                                                                                                  <  1:617547/150‑1 (MQ=255)
                                       gCCACCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCgg                                                                                                         >  1:321393/1‑151 (MQ=255)
                                        ccaccaCGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGt                                                                                                        <  2:386405/151‑1 (MQ=255)
                                        ccaccaCGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGt                                                                                                        <  2:654539/151‑1 (MQ=255)
                                         caccacGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTa                                                                                                       <  2:510123/151‑1 (MQ=255)
                                              cGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATT‑ACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATAc                                                                                                 <  1:88587/151‑1 (MQ=255)
                                               ggCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATAc                                                                                                 <  2:857888/151‑1 (MQ=255)
                                                  aaaCATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGc                                                                                               >  1:1037020/1‑150 (MQ=255)
                                                  aaaCATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCa                                                                                              <  2:1003354/151‑1 (MQ=255)
                                                      aTTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAAt                                                                                          >  2:960434/1‑151 (MQ=255)
                                                           cTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTcc                                                                                     >  2:528163/1‑151 (MQ=255)
                                                             cACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCt                                                                                    <  2:683487/150‑1 (MQ=255)
                                                             cACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTg                                                                                   <  2:340554/151‑1 (MQ=255)
                                                              aCTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTgg                                                                                  <  1:56649/151‑1 (MQ=255)
                                                               cTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTggg                                                                                 >  2:1034460/1‑151 (MQ=255)
                                                                 aaGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTACTGGGa                                                                                >  1:580510/1‑150 (MQ=255)
                                                                   gagTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTg                                                                             <  2:968119/151‑1 (MQ=255)
                                                                   gagTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTg                                                                             >  1:159716/1‑151 (MQ=255)
                                                                          tGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCaaa                                                                       <  2:811854/150‑1 (MQ=255)
                                                                              gATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAg                                                                  <  2:445051/151‑1 (MQ=255)
                                                                               aTTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAg                                                                  <  2:161362/150‑1 (MQ=255)
                                                                                  aCCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTc                                                               >  1:422682/1‑150 (MQ=255)
                                                                                  aCCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTc                                                               >  1:974956/1‑150 (MQ=255)
                                                                                      caagtgcaagtgCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCt                                                          <  1:610745/151‑1 (MQ=255)
                                                                                       aagtgcaagtgcACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTg                                                         >  1:616926/1‑151 (MQ=255)
                                                                                            caagtgcaCTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTAt                                                    <  1:906626/151‑1 (MQ=255)
                                                                                            caagtgcaCTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTAt                                                    <  1:864370/151‑1 (MQ=255)
                                                                                             aagtgcaCTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATg                                                   >  1:1008739/1‑151 (MQ=255)
                                                                                             aagtgcaCTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATg                                                   >  1:536755/1‑151 (MQ=255)
                                                                                                tgcaCTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGAATTGGTCAAACGGAGCTCATCCTGATTATGGtt                                                >  2:706317/1‑151 (MQ=255)
                                                                                                  caCTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTtc                                              <  1:189447/151‑1 (MQ=255)
                                                                                                             ttCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTcaca                                    <  2:735606/150‑1 (MQ=255)
                                                                                                             ttCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTcac                                     <  2:59952/149‑1 (MQ=255)
                                                                                                              tCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTCACATc                                  >  1:479939/1‑151 (MQ=255)
                                                                                                                 caGCACAAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTCACATCTGc                               <  2:1067287/151‑1 (MQ=255)
                                                                                                                    cacaAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTCACATCTGcccc                            >  1:768948/1‑151 (MQ=255)
                                                                                                                     acaAAGATAGATGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTCACATCTGCCCCa                           <  1:827603/151‑1 (MQ=255)
                                                                                                                             agatGAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTCACATCTGCCCCACGCAGCg                    <  2:619809/150‑1 (MQ=255)
                                                                                                                                 gAAATCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTCACATCTGCCCCACGCAGCGGtttt               >  1:543201/1‑151 (MQ=255)
                                                                                                                                  aaaTCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTCACATCTGCCCCACGCAGCGGttttt              <  2:861746/151‑1 (MQ=255)
                                                                                                                                    aTCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTCACATCTGCCCCACGCAGCGGTTTTTAc            >  1:675634/1‑151 (MQ=255)
                                                                                                                                    aTCGTGCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTCACATCTGCCCCACGCAGCGGTTTTTAc            <  1:737765/151‑1 (MQ=255)
                                                                                                                                         gCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTCACATCTGCCCCACGCAGCGGTTTTTACTAttt       <  2:48273/151‑1 (MQ=255)
                                                                                                                                         gCTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTCACATCTGCCCCACGCAGCGGTTTTTACTAttt       <  2:422656/151‑1 (MQ=255)
                                                                                                                                          cTTTTTGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTCACATCTGCCCCACGCAGCGGTTTTTACTAtttt      >  1:583301/1‑151 (MQ=255)
                                                                                                                                             tttGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTCACATCTGCCCCACGCAGCGGTTTTTACTATTTTgc    <  1:928094/150‑1 (MQ=255)
                                                                                                                                               tGCTG‑TTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTCACATCTGCCCCACGCAGCGGTTTTTACTATTTTgcgc  <  2:937059/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
AATCCTGCATCATTATATTCTCTGTTGTTCTAACACCTTGCCACCACGGCAAACATTTACTCACTAAGAGTATTTGCCGATTACCTCAAGTGCAAGTGCACTATTAACTTTCACAGCACAAAGATAGATGAAATCGTGCTTTTTGCTGTTTTTTCGAACATATCCTAACTGTCCATTGCGCAATTACCCGGTAAAATACGCAGAATTTTCCTGGGATTGGTCAAAAGGAGCTCATCCTGATTATGGTTTCATCATTCACATCTGCCCCACGCAGCGGTTTTTACTATTTTGCGC  >  NC_000913/2531221‑2531514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A