Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F50 I2 R1 139 64.5 2139856 92.7% 1983646 149.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,460,132 A→G N360S (AAC→AGC)  paaH → 3‑hydroxyadipyl‑CoA dehydrogenase, NAD+‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,460,1320AG98.2% 191.9 / NA 58N360S (AAC→AGC) paaH3‑hydroxyadipyl‑CoA dehydrogenase, NAD+‑dependent
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (26/30);  total (28/30)
Fisher's exact test for biased strand distribution p-value = 4.74e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TGACGGTGTCACGGAAATTGACGATGTTTTATTGATTGAGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAACCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGC  >  NC_000913/1459986‑1460277
                                                                                                                                                  |                                                                                                                                                 
tGACGGTGTCACGGAAATTGACGATGTTTTATTGATTGAGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCg                                                                                                                                               >  1:831014/1‑151 (MQ=255)
   cGGTGTCACGGAAATTGACGATGTTTTATTGATTGAGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGa                                                                                                                                             <  2:166862/150‑1 (MQ=255)
   cGGTGTCACGGAAATTGACGATGTTTTATTGATTGAGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGAc                                                                                                                                            <  2:182715/151‑1 (MQ=255)
       gtCACGGAAATTGACGATGTTTTATTGATTGAGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGGGGGGACCATTGCTGCTGCCGCGGTGAGCCCGGACTc                                                                                                                                          >  2:322493/1‑149 (MQ=255)
         cACGGAAATTGACGATGTTTTATTGATTGAGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGc                                                                                                                                       <  2:385800/150‑1 (MQ=255)
           cGGAAATTGACGATGTTTTATTGATTGAGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGGGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGa                                                                                                                                     >  2:365094/1‑150 (MQ=255)
              aaaTTGACGATGTTTTATTGATTGAGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGGGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGAccca                                                                                                                                 <  2:560711/151‑2 (MQ=255)
                aTTGACGATGTTTTATTGATTGAGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGCGGTGATCATTGCTGTTGCAGCGGGGAACCCGGACTCAGCGagc                                                                                                                                   >  2:558284/1‑145 (MQ=255)
                   gACGATGTTTTATTGATTGAGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGGGGTGACCATTGCCGCTTTAGCGGTGAGCCCGGACTCAGCGACCCGCCAgg                                                                                                                            >  2:465330/1‑151 (MQ=255)
                       aTGTTTTATTGATTGAGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGAGAGCCCGGACTCAGCGACCCGCAAGGCCAt                                                                                                                        >  2:764953/1‑151 (MQ=255)
                           tttATTGATTGAGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATttat                                                                                                                    >  2:28297/1‑151 (MQ=255)
                           tttATTGATTGAGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATttat                                                                                                                    >  1:514579/1‑151 (MQ=255)
                                tgattgaGACACAAGGCGAGACGGCACAGGTGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATTGATAAAATGGCGGGCAAGGAGGGGACCAATGCCGGTGCCGCGGTTATCCCGGACTCAGCGAACCCCCAGGGCTTTTAATAcc                                                                                                                >  1:686091/1‑150 (MQ=255)
                                 gattgaGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCt                                                                                                               <  1:160526/150‑1 (MQ=255)
                                 gattgaGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTg                                                                                                              >  1:211632/1‑151 (MQ=255)
                                  attgaGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTACTACCTGc                                                                                                             <  2:1039014/151‑1 (MQ=255)
                                    tgaGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGGGACCATTGCTGCTGCAGCGGGGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCt                                                                                                               >  2:991032/1‑147 (MQ=255)
                                      agaCACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGGGGAGACCATTGCCGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCa                                                                                                            >  2:144551/1‑148 (MQ=255)
                                       gaCACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCACGGCCATTTATTACCTGCaa                                                                                                           >  1:151348/1‑148 (MQ=255)
                                       gaCACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAAca                                                                                                         <  2:417388/150‑1 (MQ=255)
                                        acacAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAAcagc                                                                                                       <  2:310850/151‑1 (MQ=255)
                                               gCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCACGGTGGTGCCCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCaa                                                                                                <  2:47068/151‑1 (MQ=255)
                                               gCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCaa                                                                                                <  1:465355/151‑1 (MQ=255)
                                                  agaCGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCaaaa                                                                                              >  1:528206/1‑150 (MQ=255)
                                                          caGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGtgctgc                                                                                     <  2:1000477/151‑1 (MQ=255)
                                                               gcTGGCAATACTACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTTCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAAtt                                                                                <  2:812440/151‑1 (MQ=255)
                                                                  ggCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTg                                                                               <  1:61396/149‑1 (MQ=255)
                                                                   gCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCACGGTGGTGACCAACGCTGCTGCCGCGGTGAGCCCGGACTCAGAGACCCGCAAGGCCATTTATTACCTTCCACAGCCGGGCAAAACAATGCTGCa                                                                                    >  2:1060427/1‑143 (MQ=255)
                                                                        aCGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTAc                                                                       >  1:334640/1‑151 (MQ=255)
                                                                             tGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAgg                                                                  >  1:128791/1‑151 (MQ=255)
                                                                              ggCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGa                                                                 <  2:809736/151‑1 (MQ=255)
                                                                                     ccGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGa                                                          <  1:606066/151‑1 (MQ=255)
                                                                                          ggtAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTgg                                                     <  2:796269/151‑1 (MQ=255)
                                                                                          ggtAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTgg                                                     >  1:553666/1‑151 (MQ=255)
                                                                                           gtAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGc                                                    <  2:976169/151‑1 (MQ=255)
                                                                                                gATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACg                                               <  1:1031770/151‑1 (MQ=255)
                                                                                                 aTCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGACATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACgg                                              >  1:380729/1‑151 (MQ=255)
                                                                                                   cGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTa                                            <  2:910404/151‑1 (MQ=255)
                                                                                                     aTAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGc                                          >  1:1001938/1‑151 (MQ=255)
                                                                                                     aTAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGc                                          <  1:461975/151‑1 (MQ=255)
                                                                                                      tAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGc                                          >  2:921753/1‑150 (MQ=255)
                                                                                                        aaaTGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAAt                                       >  2:449100/1‑151 (MQ=255)
                                                                                                                 gCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCaa                              <  1:584165/151‑1 (MQ=255)
                                                                                                                   aaGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATg                            <  2:908465/151‑1 (MQ=255)
                                                                                                                   aaGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATg                            >  1:6845/1‑151 (MQ=255)
                                                                                                                    aGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGa                           <  1:477336/151‑1 (MQ=255)
                                                                                                                    aGGTGGTGACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGa                           <  1:548307/151‑1 (MQ=255)
                                                                                                                        ggtgACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGcc                       <  2:395445/151‑1 (MQ=255)
                                                                                                                         gtgACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGccc                      >  2:409348/1‑151 (MQ=255)
                                                                                                                          tgACCATTGCTGCTGCAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCt                     >  2:441633/1‑151 (MQ=255)
                                                                                                                                    tgctgcAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCtt           >  2:903235/1‑151 (MQ=255)
                                                                                                                                     gctgcAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCtt           <  1:914939/150‑1 (MQ=255)
                                                                                                                                      ctgcAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTc          >  2:865493/1‑150 (MQ=255)
                                                                                                                                        gcAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCaaa       <  1:471138/151‑1 (MQ=255)
                                                                                                                                        gcAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCa         <  1:144553/149‑1 (MQ=255)
                                                                                                                                        gcAGCGGTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCa         <  1:77207/149‑1 (MQ=255)
                                                                                                                                             ggTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGc  >  1:698563/1‑151 (MQ=255)
                                                                                                                                             ggTGAGCCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGc  <  1:956683/151‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
TGACGGTGTCACGGAAATTGACGATGTTTTATTGATTGAGACACAAGGCGAGACGGCACAGGCGCTGGCAATACGACTGGCACGCCCGGTGGTAGTGATCGATAAAATGGCGGGCAAGGTGGTGACCATTGCTGCTGCAGCGGTGAACCCGGACTCAGCGACCCGCAAGGCCATTTATTACCTGCAACAGCAGGGCAAAACAGTGCTGCAAATTGCAGATTACCCAGGAATGCTGATTTGGCGAACGGTAGCAATGATCATCAATGAAGCCCTTGATGCGCTTCAAAAAGGC  >  NC_000913/1459986‑1460277

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A