Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A5 F50 I2 R1	139	64.5	2139856	92.7%	1983646	149.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,341,415	T→C	T919A (ACG→GCG)	yfaL ←	adhesin

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,341,415	0	T	C	100.0%	242.5 / NA	65	T919A (ACG→GCG)	yfaL	adhesin
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (27/38); total (27/38)

GCCCGCAGGTTATTAAGATAACCGCCAACTTTGGCATTCAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCATTGTTTTGAAACTGCGTGGGATCAGCTGCGAAATCAACCACT  >  NC_000913/2341270‑2341560

gcccgcAGGTTATTAAGATAACCGCCAACTTTGGCATTCAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTActt                                                                                                                                              >  1:503810/1‑151 (MQ=255)

 cccgcAGGTTATTAAGATAACCGCCAACTTTGGCATTCAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTActtc                                                                                                                                             >  2:424323/1‑151 (MQ=255)

     cAGGTTATTAAGATAACCGCCAACTTTGGCATTCAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGc                                                                                                                                         <  1:322518/151‑1 (MQ=255)

         ttattaAGATAACCGCCAACTTTGGCATTCAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATc                                                                                                                                     >  1:825053/1‑151 (MQ=255)

          tattaAGATAACCGCCAACTTTGGCATTCAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATc                                                                                                                                     <  2:83943/150‑1 (MQ=255)

            ttaAGATAACCGCCAACTTTGGCATTCAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGc                                                                                                                                   >  1:934696/1‑150 (MQ=255)

             taAGATAACCGCCAACTTTGGCATTCAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCa                                                                                                                                  <  2:64269/150‑1 (MQ=255)

              aaGATAACCGCCAACTTTGGCATTCAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGc                                                                                                                                   >  2:318153/1‑148 (MQ=255)

               aGATAACCGCCAACTTTGGCATTCAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGAt                                                                                                                               <  1:166755/151‑1 (MQ=255)

                    aCCGCCAACTTTGGCATTCAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAg                                                                                                                          <  1:632819/151‑1 (MQ=255)

                    aCCGCCAACTTTGGCATTCAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGGCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAg                                                                                                                          <  2:154067/151‑1 (MQ=255)

                          aaCTTTGGCATTCAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCgttg                                                                                                                    <  2:957162/151‑1 (MQ=255)

                          aaCTTTGACATTCAACACCGGCTTGTACGTAGGCTTAGGTTCAGGGTCGGGTGTTGGATCATGATCCGGCGTTAAATCAGCATCGGGAGTCGGGTCTTGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGGTCGCAGacacacg                                                                                                                          <  2:756795/145‑4 (MQ=255)

                              ttGGCATTCAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCgttgtt                                                                                                                  <  1:688870/149‑1 (MQ=255)

                               tGGCATTCAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTAt                                                                                                                <  2:1030168/150‑1 (MQ=255)

                                     tCAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTccac                                                                                                         >  1:875541/1‑151 (MQ=255)

                                      cAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTccac                                                                                                         <  1:858476/150‑1 (MQ=255)

                                       aaCACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTccacc                                                                                                        >  1:109331/1‑150 (MQ=255)

                                       aaCACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTccacc                                                                                                        <  1:970575/150‑1 (MQ=255)

                                         cacCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGc                                                                                                     <  2:132721/151‑1 (MQ=255)

                                            cGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCgtg                                                                                                  <  2:685851/151‑1 (MQ=255)

                                             ggCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCgtgt                                                                                                 >  2:126026/1‑151 (MQ=255)

                                              gCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTa                                                                                                <  1:505675/151‑1 (MQ=255)

                                                tGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGt                                                                                              >  1:816819/1‑151 (MQ=255)

                                                           cGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTccc                                                                                   >  2:618792/1‑151 (MQ=255)

                                                             tAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCat                                                                                 >  2:539735/1‑151 (MQ=255)

                                                                  tCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTg                                                                             >  2:230759/1‑150 (MQ=255)

                                                                    cgggtcgggtGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACg                                                                          >  1:700346/1‑151 (MQ=255)

                                                                    cgggtcgggtGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACg                                                                          <  1:239404/151‑1 (MQ=255)

                                                                           ggtGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGc                                                                   <  1:539775/151‑1 (MQ=255)

                                                                              gtTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGctgc                                                                >  1:7998/1‑151 (MQ=255)

                                                                                 ggATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGctgcct                                                              <  1:689180/150‑1 (MQ=255)

                                                                                 ggATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGctgcct                                                              <  1:537753/150‑1 (MQ=255)

                                                                                    tCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACTCTCCCATATTGACGTAGCCGCtgcctgcc                                                           >  2:1019429/1‑150 (MQ=255)

                                                                                    tCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCtgcctgcc                                                           >  1:450679/1‑150 (MQ=255)

                                                                                     cAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCa                                                          <  2:318806/150‑1 (MQ=255)

                                                                                      aGGAACCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGa                                                        <  2:280689/151‑1 (MQ=255)

                                                                                       ggATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGAc                                                       <  2:862372/151‑1 (MQ=255)

                                                                                       ggATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGAc                                                       <  2:417376/151‑1 (MQ=255)

                                                                                         aTCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTg                                                     >  1:787574/1‑151 (MQ=255)

                                                                                           ccGGCGTGGGATCAGGATCGGGCGTCGGGTCTGCATCAGCTGGCGCTGGCGGCGCGATTTCTTGCGATCGAAGATAACAGCCGTCGTTGTCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGGAGCCGCTGCCTGCCACACTg                                                     >  2:542121/1‑149 (MQ=255)

                                                                                           ccGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGaa                                                   <  1:424349/151‑1 (MQ=255)

                                                                                              gCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTg                                                <  2:875493/151‑1 (MQ=255)

                                                                                               cGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTgc                                               >  2:868341/1‑151 (MQ=255)

                                                                                                  gggATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTgcgc                                             >  1:189741/1‑150 (MQ=255)

                                                                                                  gggATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTgcgc                                             <  1:553891/150‑1 (MQ=255)

                                                                                                  gggATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCa                                            <  1:70766/151‑1 (MQ=255)

                                                                                                   ggATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCAt                                           <  2:950472/151‑1 (MQ=255)

                                                                                                       cAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCATTGt                                        <  2:602969/150‑1 (MQ=255)

                                                                                                            tCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCATTGTTTTGa                                   >  2:860110/1‑150 (MQ=255)

                                                                                                                gAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCATTGTTTTGAAACTg                              <  1:142025/151‑1 (MQ=255)

                                                                                                                gAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCATTGTTTTGAAACTg                              <  2:626199/151‑1 (MQ=255)

                                                                                                                     gggTCTGGATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCATTGTTTTGAAACTGCGTgg                         >  2:738044/1‑151 (MQ=255)

                                                                                                                       gTCTGGATCGGGTGAAGAAGGCGACGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCCGAGTGTAGTCATACGCTCACAAATTGACGTCGCCGCTGCCTGCCAGACTGAACTGCGCATTGTTTTGAAACTGCGTGGGa                       <  2:719968/151‑1 (MQ=255)

                                                                                                                           ggATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCATTGTTTTGAAACTGCGTGGGATc                     >  1:502120/1‑149 (MQ=255)

                                                                                                                           ggATCAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCATTGTTTTGAAACTGCGTGGGATCAg                   <  2:226903/151‑1 (MQ=255)

                                                                                                                               cAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCATTGTTTTGAAACTGCGTGGGATCAGCTg                <  2:1003592/150‑1 (MQ=255)

                                                                                                                               cAGGTGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCATTGTTTTGAAACTGCGTGGGATCAGCTGc               <  1:799909/151‑1 (MQ=255)

                                                                                                                                   tGGCGATGGCGGCGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCATTGTTTTGAAACTGCGTGGGATCAGCTGCGaa            >  1:282633/1‑150 (MQ=255)

                                                                                                                                          ggcggcGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCATTGTTTTGAAACTGCGTGGGATCAGCTGCGAAATCAAcc     <  2:259331/150‑1 (MQ=255)

                                                                                                                                          ggcggcGCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCATTGTTTTGAAACTGCGTGGGATCAGCTGCGAAATCAACCa    <  2:282608/151‑1 (MQ=255)

                                                                                                                                           gcggcgCTACTTCTTGCGATCGCAGATAGCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTACCAGACTGAACTGCGCATTGTTTTGAAACTGCGTGGGATCAGCTGCGAAATCAACCa    >  2:316018/1‑150 (MQ=255)

                                                                                                                                           gcggcgCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCATTGTTTTGAAACTGCGTGGGATCAGCTGCGAAATCAACCAc   >  2:479143/1‑151 (MQ=255)

                                                                                                                                            cggcgCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCATTGTTTTGAAACTGCGTGGGATCAGCTGCGAAATCAACCACt  >  1:548948/1‑151 (MQ=255)

                                                                                                                                            cggcgCTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCATTGTTTTGAAACTGCGTGGGATCAGCTGCGAAATCAACCACt  <  1:859395/151‑1 (MQ=255)

GCCCGCAGGTTATTAAGATAACCGCCAACTTTGGCATTCAACACCGGCTGGTAAGCAGGCGTAGGTTCCGGGTCGGGTGTTGGATCAGGATCCGGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGCCAGACTGAACTGCGCATTGTTTTGAAACTGCGTGGGATCAGCTGCGAAATCAACCACT  >  NC_000913/2341270‑2341560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A