Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F50 I2 R1 139 64.5 2139856 92.7% 1983646 149.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,584,258 T→C Y423C (TAC→TGC)  aegA ← putative oxidoreductase, FeS binding subunit/NAD/FAD‑binding subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,584,2580TC100.0% 235.7 / NA 62Y423C (TAC→TGC) aegAputative oxidoreductase, FeS binding subunit/NAD/FAD‑binding subunit
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (30/32);  total (30/32)

TTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGTAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCCGACGGCGTGCCAGCAGGGATTTATCCAG  >  NC_000913/2584117‑2584403
                                                                                                                                             |                                                                                                                                                 
ttAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGTGTCCTAAACGCCCGGCGCATCTTCAGTGGGTAAACCCGCTTTTATGGAACGGCAAGTGCCt                                                                                                                                           >  2:130460/1‑150 (MQ=255)
  aaGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACg                                                                                                                                        <  2:958792/151‑1 (MQ=255)
    gTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGcc                                                                                                                                      >  2:437812/1‑151 (MQ=255)
       cggcggTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCaa                                                                                                                                    >  1:639470/1‑150 (MQ=255)
       cggcggTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAAc                                                                                                                                   <  1:922195/151‑1 (MQ=255)
       cggcggTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAAc                                                                                                                                   <  1:947297/151‑1 (MQ=255)
        ggcggTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACg                                                                                                                                  >  1:530246/1‑151 (MQ=255)
              aTTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGAc                                                                                                                             <  2:216007/150‑1 (MQ=255)
                tGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACcg                                                                                                                           <  1:940267/150‑1 (MQ=255)
                   tAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGcgtc                                                                                                                       >  1:165748/1‑151 (MQ=255)
                     aaCGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGcgtcgt                                                                                                                     >  1:264195/1‑151 (MQ=255)
                     aaCGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGcgtcgt                                                                                                                     <  2:34657/151‑1 (MQ=255)
                                 ggcaGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCaaa                                                                                                          >  2:30285/4‑150 (MQ=255)
                                 ggTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCaaa                                                                                                          >  1:868353/1‑150 (MQ=255)
                                 ggTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCaaa                                                                                                          >  1:178305/1‑150 (MQ=255)
                                   tAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGc                                                                                                       >  1:386270/1‑151 (MQ=255)
                                         ttCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATcc                                                                                                 >  2:808630/1‑151 (MQ=255)
                                         ttCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATcc                                                                                                 >  2:332395/1‑151 (MQ=255)
                                         ttCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATcc                                                                                                 >  1:173656/1‑151 (MQ=255)
                                          tCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAAt                                                                                                   <  1:22427/148‑1 (MQ=255)
                                            gAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCaaa                                                                                              <  2:676449/151‑1 (MQ=255)
                                              gCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCaa                                                                                               >  1:883105/1‑148 (MQ=255)
                                                cccATCACCTGTTGAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAgaga                                                                                          <  2:437396/151‑1 (MQ=255)
                                                      aCCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCtt                                                                                    >  1:183001/1‑151 (MQ=255)
                                                         tGTTTAGTGTTAGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCACAGAGACATCTTTAc                                                                                 >  2:525116/1‑151 (MQ=255)
                                                          gTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTAcc                                                                                >  1:201342/1‑151 (MQ=255)
                                                              aGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGGCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCAc                                                                             <  1:1052793/150‑1 (MQ=255)
                                                                 gtTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTc                                                                          >  2:619370/1‑150 (MQ=255)
                                                                     gCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAAt                                                                     <  1:990196/151‑1 (MQ=255)
                                                                        aTGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTg                                                                   >  2:445283/1‑150 (MQ=255)
                                                                          gAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGt                                                                <  1:808676/151‑1 (MQ=255)
                                                                              aaCGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCg                                                             >  2:817923/1‑150 (MQ=255)
                                                                                cGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTc                                                              >  1:559106/1‑147 (MQ=255)
                                                                                cGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAg                                                          <  2:132130/151‑1 (MQ=255)
                                                                                         gTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATcccc                                                 <  2:173655/151‑1 (MQ=255)
                                                                                          tCATAAACGCCCGGCGCATCTTCATTGGGGAAACCCGCTTTCATGGAACGGCACGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGCAGTGAATcc                                                   >  1:1069825/1‑148 (MQ=255)
                                                                                            aTAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATc                                              <  2:674944/151‑1 (MQ=255)
                                                                                              aaaCGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATcgc                                            >  2:1024378/1‑151 (MQ=255)
                                                                                              aaaCGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATcg                                             <  2:917470/150‑1 (MQ=255)
                                                                                              aaaCGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATcg                                             <  1:549251/150‑1 (MQ=255)
                                                                                                     cGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAg                                     <  1:648695/151‑1 (MQ=255)
                                                                                                       gcgcATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGa                                       >  1:727445/1‑147 (MQ=255)
                                                                                                       gcgcATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGAt                                   <  1:894559/151‑1 (MQ=255)
                                                                                                        cgcATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGAtt                                  <  1:822264/151‑1 (MQ=255)
                                                                                                          cATCTTCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTc                                <  1:152836/151‑1 (MQ=255)
                                                                                                               tCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCCg                             <  1:116590/149‑1 (MQ=255)
                                                                                                               tCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCCGAc                           >  2:8786/1‑151 (MQ=255)
                                                                                                               tCATTGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCCGAc                           >  1:345055/1‑151 (MQ=255)
                                                                                                                   tGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCCGACGGc                        <  1:991819/150‑1 (MQ=255)
                                                                                                                   tGGGTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCCGACGGc                        <  1:543713/150‑1 (MQ=255)
                                                                                                                     ggTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCCGACGGCGTg                     <  1:440638/151‑1 (MQ=255)
                                                                                                                      gTAAACCCGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCCGACGGCGTGc                    <  1:509478/151‑1 (MQ=255)
                                                                                                                          aCCCGCTGTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTGGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCGGCCGGCGGGCcagc                <  2:816755/151‑1 (MQ=255)
                                                                                                                           cccGCTTTCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCCGACGGCGTGCcagca               <  1:522108/151‑1 (MQ=255)
                                                                                                                                tttCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCCGACGGCGTGCCAGCAGGGAt          >  2:799492/1‑151 (MQ=255)
                                                                                                                                 ttCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCCGACGGCGTGCCAGCAGGGa           <  1:764732/149‑1 (MQ=255)
                                                                                                                                  tCATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCCGACGGCGTGCCAGCAGGGAttt        >  2:37029/1‑151 (MQ=255)
                                                                                                                                   cATGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCCCGCTGAAGATTTCCCGACGGCGTGCCAGCAGGGAtttc       >  2:274537/1‑150 (MQ=255)
                                                                                                                                    aTGGAACGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCCGACGGCGTGCCAGCAGGGATTTAt      <  2:994847/151‑1 (MQ=255)
                                                                                                                                        aaCGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCGCAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCCGACGGCGTGCCAGCAGGGATTTATCCAg  <  2:845822/151‑1 (MQ=255)
                                                                                                                                        aaCGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCCGACGGCGTGCCAGCAGGGATTTAt      >  2:828861/1‑147 (MQ=255)
                                                                                                                                        aaCGGCAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCCGACGGCGTGCCAGCAGGGATTTATCCAg  <  1:69187/151‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                                 
TTAAGTCCGGCGGTATTGATAAACGGCTCTTCCGGTAGCTCTTCGAGCCCCATCACCTGTTTAGTGTTGGCAATGAGGAACGGCAGCGCGTCATAAACGCCCGGCGCATCTTCATTGGGTAAACCCGCTTTCATGGAACGGTAAGTGCCTACGCCAACGAAGACCGCGTCGTATTGTTCCAAAAGCGAATCCAAAGAGACATCTTTACCCACTTCACAATTGAGTTCGAAGTGAATCCCCATCGCGCTGAAGATTTCCCGACGGCGTGCCAGCAGGGATTTATCCAG  >  NC_000913/2584117‑2584403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A