Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 559,672 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583559,6720AT98.5% 447.8 / NA 198intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/0);  major base T (99/95);  minor base G (0/3);  total (100/98)
Fisher's exact test for biased strand distribution p-value = 1.21e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583559,6730CG99.0% 449.9 / NA 198intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  major base G (98/96);  minor base T (1/1);  total (100/98)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583559,6740TA99.5% 454.0 / NA 198intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (99/97);  minor base C (1/0);  total (100/98)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 198 total aligned reads displayed.

GCGCAAAGCTGGATAAACGCATCACCGCCAGCATCGTGCCCCACAAAATACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAAGCTCTCCCAGGCATGGGC‑ACTGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTGCTGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCACTGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGGCTCTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGAACTA  >  CP042583/559396‑559951
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                      
          ggATAAACGCATCACCGCCAGCATCGTGCCCCACAAAATACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCACGCTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TTAGGAACCGAGCAATTTAccc                                                                                                                                                                                                                                                                     >  2:1593766/1‑288 (MQ=255)
           gATAAACGCATCACCGCCAGCATCGTGCCCCACAAAATACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCACCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCg                                                                                                                                                                                                                                                                    >  1:126833/1‑288 (MQ=255)
                   cATCACCGCCAGCATCGTGCCCCACAAAATACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGcgccg                                                                                                                                                                                                                                                           <  1:205644/289‑1 (MQ=255)
                     tCACCGCCAGCATCGTGCCCCACAAAATACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGcgccgc                                                                                                                                                                                                                                                          >  2:2067064/1‑288 (MQ=255)
                     tCACCGCCAGCATCGTGCCCCACAAAATACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCgccgcc                                                                                                                                                                                                                                                         <  2:1754372/289‑1 (MQ=255)
                       aCCGCCAGCATCGTGCCCCACAAAATACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGACATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCat                                                                                                                                                                                                                                                       <  1:135454/289‑1 (MQ=255)
                                aTCGTGCCCCACAAAATACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATccacc                                                                                                                                                                                                                                                <  2:255470/287‑1 (MQ=255)
                                   gTGCCCCACAAAATACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGCCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGCTCAACCAGCGCCCTCACCAGCATGATAAAAGCGTTAATCAACACATACCCCACCGAAATGGCGGTAAACGACCCCCAGGCATGGGC‑TGAGTAATCGAGCACTTTACCCTCCTGCCCCGCCACAACCACCAGAc                                                                                                                                                                                                                                            >  2:1246461/1‑288 (MQ=255)
                                    tGCCCCACAAAATACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGCTCACCAGCCCGTCGATCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCCTGTTGCCAGCCAGGCGAACTTTACGTTCAACCAGCGTCATCACCCGCATGATAAAAGCGTTAATCAACACATAAGCCAGCGTAATGGCAGCAAACCACTCCCAAGCAGGGGC‑TGACTAAAGCAGCAATTTACCCCCCCGCGCCGCCCTATACCCCAGAcac                                                                                                                                                                                                                                          >  2:1325885/1‑287 (MQ=255)
                                      ccccACAAAATACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGAt                                                                                                                                                                                                                                        <  1:645018/289‑1 (MQ=255)
                                           caAAATACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCgccgcc                                                                                                                                                                                                                                                         >  2:536831/1‑267 (MQ=255)
                                           caAAATACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCgccgcc                                                                                                                                                                                                                                                         <  1:536831/267‑1 (MQ=255)
                                           caAAATACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACCCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCCTATCCACCAGACCGATAggcc                                                                                                                                                                                                                                   >  2:2112349/1‑286 (MQ=255)
                                           caAAATACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCACATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCa                                                                                                                                                                                                                                                                             <  1:1853820/247‑1 (MQ=255)
                                                       cACTACAGCCGTGACGGTGATTTTCAGGGTGGTCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCgg                                                                                                                                                                                                                       <  1:956543/289‑1 (MQ=255)
                                                                cgTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCa                                                                                                                                                                                                              <  1:1593766/289‑1 (MQ=255)
                                                                 gTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCAc                                                                                                                                                                                                             <  1:1918049/289‑1 (MQ=255)
                                                                  tGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCAcc                                                                                                                                                                                                            >  2:1720443/1‑289 (MQ=255)
                                                                  tGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAATCGAGGCGATGGCGGAGTTTTTCAc                                                                                                                                                                                                             >  1:1115601/1‑288 (MQ=255)
                                                                  tGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCCTAATGGCGGTAAACTACTCCCAGGCATGGGCTACAG‑AATCGAGCCATTTACCCGCCTGCCCCGCCTTATCCAACAGACGGAATGTCAGGGCGAAGGCgggctctttcgcc                                                                                                                                                                                                            >  2:587423/1‑278 (MQ=255)
                                                                   gACGGGGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCAcc                                                                                                                                                                                                            <  1:286060/288‑1 (MQ=255)
                                                                     cGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAgg                                                                                                                                                                                                         <  1:1220053/289‑1 (MQ=255)
                                                                      gggtaattgcAGGGTGATCACCAGGCCGTCGAGCAGAAATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATGTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGCCTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAgg                                                                                                                                                                                                         <  2:1863600/279‑1 (MQ=255)
                                                                           ttttacgggTGCTCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGCAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTtcat                                                                                                                                                                                                    <  1:848591/282‑1 (MQ=255)
                                                                                  ggTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCAtctctg                                                                                                                                                                                            >  1:1567292/1‑287 (MQ=255)
                                                                                   gggATCACCCGCCCGTCGAGAAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCTTACATAATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACTTTCAACCAGAGTCATCACCAGCAGGATAAAAGCGTTAATAACAACATACGCCAGGGTAATGGCGGTAAACGCCTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCAtctctg                                                                                                                                                                                            <  2:1834717/286‑3 (MQ=255)
                                                                                     gATCACAAGCCCGTCGAGAAGATTTGGCAGGGAAGGGAAAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCAtctctgag                                                                                                                                                                                          <  1:1310966/288‑5 (MQ=255)
                                                                                              cccGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATcg                                                                                                                                                                                   >  2:728571/1‑286 (MQ=255)
                                                                                               ccGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATcgg                                                                                                                                                                                  <  1:1720443/286‑1 (MQ=255)
                                                                                                cGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCggg                                                                                                                                                                              >  1:926293/1‑289 (MQ=255)
                                                                                                  tCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTtcat                                                                                                                                                                                                    >  2:1014512/1‑265 (MQ=255)
                                                                                                  tCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTtcat                                                                                                                                                                                                    <  1:1014512/265‑1 (MQ=255)
                                                                                                  tCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTtcat                                                                                                                                                                                                    <  1:1767023/265‑1 (MQ=255)
                                                                                                  tCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGAc                                                                                                                                                                            >  1:1474399/1‑289 (MQ=255)
                                                                                                  tCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGGAATCGAGCAATTTACCCGCCTGCGCCCCCATAACCACCCGACCGACAGTCGAAGCGGTGGCGGAGATCTTCACCAGGTTCCACCTCTCCGAGGTTATCGGCGGGAc                                                                                                                                                                            >  2:1136067/1‑289 (MQ=255)
                                                                                                             tGGCAGTGAAGGGACAATGGAACTCCAGCAAACCTCGTACATTATTGGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGAAATGGCGGTAAACGCCTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGAt                                                                                                                                                                <  2:1474399/289‑1 (MQ=255)
                                                                                                               gCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCa                                                                                                                                                                                                           <  1:811269/245‑1 (MQ=255)
                                                                                                               gCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCa                                                                                                                                                                                                           >  2:811269/1‑245 (MQ=255)
                                                                                                                    gaagggaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATACACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGCTCATCATCTCTGAGGTCATCGGCGTGACGCT‑AACGCGATaatactt                                                                                                                                                         >  2:1566536/1‑284 (MQ=255)
                                                                                                                    gaagcgaCAATGAAAATACAGACAACCTCGTACAGTATTTACCCCCCATGGTGCCAGGCAGGCGAACTTTACGTTAAACAGGCGTCATCACCAGAATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCGCAGGCATGGGC‑TGAGTAAGCGGGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCa                                                                                                                                                           <  2:2254610/287‑1 (MQ=255)
                                                                                                                      agggaCAATGAAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATTTTGCCAGGCAGGCGAACTTTCCGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGAAATGGCGGTAAACGCCTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTa                                                                                                                                                        <  1:474766/288‑1 (MQ=255)
                                                                                                                         gaCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTATGAGGTCATCGGCGGGACGATAAACGC‑ATAAGCATTAGgca                                                                                                                                                    >  2:983201/1‑289 (MQ=255)
                                                                                                                          aCAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGgca                                                                                                                                                    >  1:165030/1‑288 (MQ=255)
                                                                                                                           cAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGgcag                                                                                                                                                   <  1:2112349/288‑1 (MQ=255)
                                                                                                                            aaTGGAGCCACAGACAAACCCGTACAATTATTCCCCCCCAGGTTGCCAGGCAGGCGAATTTTACGTTCAACCACCGTCATAACCAGAATGATAAAGTCTTTAAGCAACACATACGCAAGCGTAATGGCGGTAAACGACGCCCGGGCATGGGC‑TGAGTAATCGGGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGgcagca                                                                                                                                                 <  2:2167907/289‑1 (MQ=255)
                                                                                                                             aTGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACAAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGcagcag                                                                                                                                                <  1:1174384/289‑1 (MQ=255)
                                                                                                                               ggAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGACGCAGt                                                                                                                                               >  1:2106634/1‑288 (MQ=255)
                                                                                                                                 aaCTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTAc                                                                                                                                             <  1:1417070/288‑1 (MQ=255)
                                                                                                                                  aCTCCGGTCAAACTCGTACATTATTTGCCCACCATGTTGCCAGCCAGGCCAACTTTACTTTCAACCACCGGCATCACCAGCATGATAAAAGCGTTAATCACCACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGt                                                                                                                                           <  2:2106634/289‑1 (MQ=255)
                                                                                                                                        gTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGACAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTCCGACGCCATATCCCCCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCCCCAGGCTCATCATCTCTGAGGTCATCGGCGGGACAAT‑AAAGCGATAAGCATTAGGCAGCAGTACGTATCGAt                                                                                                                                     >  1:368794/1‑289 (MQ=255)
                                                                                                                                          cAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTATTCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGAt                                                                                                                                     <  1:873602/287‑1 (MQ=255)
                                                                                                                                          cAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGAt                                                                                                                                     <  1:228017/287‑1 (MQ=255)
                                                                                                                                            aaCTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGc                                                                                                                                 <  1:722119/289‑1 (MQ=255)
                                                                                                                                                cGTACATTATTTGCCCCCCGTGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATcggc                                                                                                                                                                                 >  2:789842/1‑238 (MQ=255)
                                                                                                                                                cGTACATTATTTGCCCCCCGTGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATcggc                                                                                                                                                                                 <  1:789842/238‑1 (MQ=255)
                                                                                                                                                cGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGAcc                                                                                                                                                                                                                                           >  2:1759012/1‑180 (MQ=255)
                                                                                                                                                  tACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATcggcgg                                                                                                                                                                               <  2:2190517/238‑1 (MQ=255)
                                                                                                                                                  tACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATcggcgg                                                                                                                                                                               >  1:2190517/1‑238 (MQ=255)
                                                                                                                                                    catattttGCCCCCCAGGTTGCAAGAGAGGGGAACTTTAGCGTAAAACGGCTTCAACACAAGCATGAAAAAAGCGTTAATCAAAAAATACGCCAGCGTAAGGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGAAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGt                                                                                                                          <  2:1800019/283‑1 (MQ=255)
                                                                                                                                                       tattTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGt                                                                                                                                           <  1:1369666/268‑1 (MQ=255)
                                                                                                                                                          ttGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCa                                                                                                                   <  1:1298635/289‑1 (MQ=255)
                                                                                                                                                                 ccATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTa                                                                                                                                                        <  2:2149119/245‑1 (MQ=255)
                                                                                                                                                                        gCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTa                                                                                                                                                        <  1:83854/238‑1 (MQ=255)
                                                                                                                                                                         ccAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGAGAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGTGATAAGCATTAGGCAGCAGTACGTAGCGATAAGCCTGCGGTAGCGTTAGGCCCATTGCCAgag                                                                                                    >  1:601922/1‑287 (MQ=255)
                                                                                                                                                                            ggcaggcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑ACCGCGATAAGCATTAGGCAGCAGTACGTATCGATAACACCGCGGTAGCGTCAGGCCCATCCCCcgcggc                                                                                                  >  2:1954708/1‑286 (MQ=255)
                                                                                                                                                                            ggcaggcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGcgcg                                                                                                  >  1:1074272/1‑288 (MQ=255)
                                                                                                                                                                                 gcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCCTGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTGCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGGT‑AACGCGATAAGCATTAGGCAACAGGACGTGTACACAAGCCCGGGGTAGCGTAAGCACCATCGACAGCTCGGCCttt                                                                                            >  2:660128/1‑289 (MQ=255)
                                                                                                                                                                                 gcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACgg                                                                                                                                           >  2:1806455/1‑241 (MQ=255)
                                                                                                                                                                                 gcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGt                                                                                                                                           <  1:1806455/242‑1 (MQ=255)
                                                                                                                                                                                 gcGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCAttt                                                                                            >  1:1826477/1‑289 (MQ=255)
                                                                                                                                                                                                      cGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCCTCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAgcga                                                                        >  1:2172433/1‑285 (MQ=255)
                                                                                                                                                                                                          atcaCCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAgcgactgaa                                                                   >  1:1551890/1‑281 (MQ=255)
                                                                                                                                                                                                             aCCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATcg                                                                <  1:426655/289‑1 (MQ=255)
                                                                                                                                                                                                               cAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATcgcg                                                              <  1:39249/289‑1 (MQ=255)
                                                                                                                                                                                                                      aTAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGGATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCCCGGCATTTTTTTGCCCTCGCGGCAGCGACGTAATCGCGGCCCGt                                                        >  2:426655/1‑288 (MQ=255)
                                                                                                                                                                                                                       tAAAAGCGTTAATCAACACAAACGCAAGCGTAATGGCGGTAAACGAACCCCAGGCATGGGC‑TGAGTAATCGGGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTAc                                                      <  2:820406/289‑1 (MQ=255)
                                                                                                                                                                                                                       gtataaggaacagcAACACATACGCCGGCGTAATGGCGGAAAACGACTCCCAGGCATGGGC‑TGAGTAATCGGGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTAc                                                      <  2:1043393/276‑1 (MQ=255)
                                                                                                                                                                                                                          aaGCGTTAATCAACACATACGCCAGCGTAACGGCGGTAACCGACTCCCAGGCATGGGC‑TGAGTAAGCGGGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTg                                                   <  1:2083928/289‑1 (MQ=255)
                                                                                                                                                                                                                            gCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGt                                                  >  1:2034304/1‑288 (MQ=255)
                                                                                                                                                                                                                               ttAATCAACACATACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGGACCTGTTCg                                               >  1:175484/1‑288 (MQ=255)
                                                                                                                                                                                                                                       cacaTACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGt                                                                                                                                           >  2:846364/1‑188 (MQ=255)
                                                                                                                                                                                                                                        acaTACGCCAGCGTAATGGCGGTAAACGCATCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACggg                                     <  1:983201/289‑1 (MQ=255)
                                                                                                                                                                                                                                        acaTACGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACggg                                     <  1:262081/289‑1 (MQ=255)
                                                                                                                                                                                                                                             cGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGgcggcg                                >  1:1496162/1‑289 (MQ=255)
                                                                                                                                                                                                                                             cGCCAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCACTGCGGAAGCGACTGAATCGCGGCGCGTAGCTGTTCGCAAACACGGgcggcg                                >  1:784827/1‑289 (MQ=255)
                                                                                                                                                                                                                                               ccAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATcgg                                                                                                                                                                                  >  2:876326/1‑142 (MQ=255)
                                                                                                                                                                                                                                               ccAGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCaa                                            >  1:1043393/1‑275 (MQ=255)
                                                                                                                                                                                                                                                 aGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCCGCGACTGAATCGCCGCCCGTCCCTGTTCGCAAACACGGGCCGCGGTaa                            >  2:928949/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 aGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTaa                            >  1:1617334/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 aGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTaa                            >  1:1515875/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 aGCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCA‑TTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTaaa                           >  1:196565/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  gCGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGGACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCCTTTTTTTGGCCCCGCGGCACCCACTGAATCGCGGCGCGTACCTGTTCCCAAACCCGggcgggcggaaa                           >  2:2059308/1‑282 (MQ=255)
                                                                                                                                                                                                                                                   tgatagggCGGAAAAGCACTCGCAGGAATGGGC‑TGAGTAATAGAGCAATTTACCCGCCTGCGCGGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGGGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTaaa                           <  2:1617334/282‑1 (MQ=255)
                                                                                                                                                                                                                                                   cGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCACCGACTGAATCGCGGCGCGCACCTGTTTGCAAACACACGCGGCGGTCAAc                          >  2:1975290/1‑289 (MQ=255)
                                                                                                                                                                                                                                                   cGTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGAAAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCCGCGGCTGAATTGCGGCGCCTACCCGTTCGCCAACACGGGCGGCGGCAAAc                          >  2:331792/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    gTAATGGCGGTAAACGACTCCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGcagcag                                                                                                                                                >  1:564201/1‑170 (MQ=255)
                                                                                                                                                                                                                                                             gtaaacgactcCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGCCTGAATCGCGGCGCGTACCTGTTGGCAAACACGGGCGGCGGTAAACAGCCCCAGGc                >  1:2077073/9‑289 (MQ=255)
                                                                                                                                                                                                                                                             gtaaacgacgcccAGGCAGGGGG‑TGGGTAAGCGAGCAAGTCACCCGCCTGCGACGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAgg                 <  2:36782/278‑1 (MQ=255)
                                                                                                                                                                                                                                                                     ctcCCAGGCATGGGC‑TGAGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAg                                                                                                                                                             <  1:1681577/140‑1 (MQ=255)
                                                                                                                                                                                                                                                                            gCATGGGC‑TGAGTAATCGAGCAATTTCCCCGCCTGCGCCGCCATATCCACCAGACCGATAGTCGAGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCTGAGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGCGACTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGatgaa  <  1:1098527/288‑5 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                      
GCGCAAAGCTGGATAAACGCATCACCGCCAGCATCGTGCCCCACAAAATACCAATCACTACCGCCGTGACGGTGATTTTCAGGGTGATCACCAGCCCGTCGAGCAGATATGGCAGGGAAGGGACAATGGAACTCCAGTCAAACTCGTACATTATTTGCCCCCCATGTTGCCAGGCAGGCGAACTTTACGTTCAACCAGCGTCATCACCAGCATGATAAAAGCGTTAATCAACACATACGCCAGCGTAATGGCGGTAAAGCTCTCCCAGGCATGGGC‑ACTGTAATCGAGCAATTTACCCGCCTGCGCCGCCATATCCACCAGACCGATAGTGCTGGCGATGGCGGAGTTTTTCACCAGGTTCATCATCTCACTGGTCATCGGCGGGACGAT‑AACGCGATAAGCATTAGGCAGCAGTACGTATCGATAAGCCTGCGGTAGCGTCAGGCCCATCGCCAGCGCGGCATTTTTTTGCCCTCGCGGCAGGCTCTGAATCGCGGCGCGTACCTGTTCGCAAACACGGGCGGCGGTAAACAGCCCCAGGCAGAGCATGGAACTA  >  CP042583/559396‑559951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A