Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
4926 |
296.4 |
4517418 |
96.8% |
4372860 |
264.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
612,263 |
3 bp→TGA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 612,263 | 0 | A | T | 99.6%
| 669.3
/ NA
| 279 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (140/138); minor base G (1/0); total (141/138) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 612,264 | 0 | C | G | 99.3%
| 649.2
/ NA
| 279 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base G (139/137); minor base T (1/1); total (141/138) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 612,265 | 0 | T | A | 99.6%
| 663.6
/ NA
| 279 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base A (140/138); total (141/138) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
Only 100 of 279 total aligned reads displayed.
TGGGAGAACGCCTTTTTCATTTCTCCCCAGATAGGCAATGGTCAGATAATACGCGGTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTACTGGCTTGTTTCACAACCCGCACCTGGC‑TTGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCGCAGCATTGCAACCCAAGCTGATGGTTAACAACATTAAGGGTAATCCTTTAATAAATGTCATT > CP042583/611981‑612542
|||
tGGGAGAACGCCTTTTTCATTTCTCCACAGATAGGCAATGGTCAGATAATACGCGGTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTACGACCTCTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATCCGACTTTGACTAGCGACCTGAAGTATCGCATGGAAGCTGCTTTTATCCGGAGCGGGAGGATTCTCGCGCTTATTGTAGAAAAACATCGTTTCCGGTACGCCAGGTAACTGTGTGGTGCTGGCt > 2:1124542/1‑289 (MQ=255)
cGCCTTTTTCATTTCTCCCCAGATAGGCAATGGTCAGATAATACGCGGTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTcac > 1:704644/1‑289 (MQ=255)
gCCTTTTTCATTTCTCCCCAGATAGGCAATGGTCAGATAATACGCGGTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTcaca < 2:770439/289‑1 (MQ=255)
tttttCATTTCTCCCCAGATAGGCAATGGTCAGATAATACGCGGTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAAcc < 1:478191/289‑1 (MQ=255)
tttttCATTTCTCCCCAGATAGGCAATGGTCAGATAATACGCGGTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAAcc < 1:1818710/289‑1 (MQ=255)
tttttCATTTCTCCCCAGATAGGCAATGGTCAGATAATACGCGGTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAAcc < 2:1461100/289‑1 (MQ=255)
aGGCAATGGTCAGATAATACGCGGGAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATGGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCttt < 2:965259/289‑1 (MQ=255)
gCAATGGTCAGATAATACGCGGTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCg > 1:1204097/1‑289 (MQ=255)
tgTCAGAGAATACGCGGTAGGATTTTTCAGTGTCAGTTTGTGGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCTGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTAGCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTcc < 2:410949/288‑1 (MQ=255)
ggTCAGATAATACGCGGTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTTCA‑GTGTCCCTTTCGTTTc > 2:1687886/1‑288 (MQ=255)
ggTCAGATAATACGCGGTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTcc > 2:812077/1‑289 (MQ=255)
gTCAGATAATACGCGGTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTca < 1:1870616/256‑1 (MQ=255)
ataCGCGGTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAg > 1:1786946/1‑282 (MQ=255)
ataCGCGGTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGCCGTTGa > 1:1311419/1‑289 (MQ=255)
cgcgGTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTcc > 2:1696450/1‑277 (MQ=255)
gTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATTCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAgggg > 1:1349695/1‑289 (MQ=255)
gTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCttt > 2:1083127/1‑266 (MQ=255)
gTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAgggg > 1:1669234/1‑289 (MQ=255)
gTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAgggg > 1:1915471/1‑289 (MQ=255)
gTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCCTTCGGTTCCAGACGTTGAATAgggg > 1:397061/1‑289 (MQ=255)
gTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCCCTTTCGTTTCCAAACGTTGACTAgggg > 2:935183/1‑289 (MQ=255)
ttttttAGTGTCAGTTGGTGTCCCTGCTGGCTGACCTGGAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCGTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCaaa < 2:1990964/288‑1 (MQ=255)
tttttCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCaaa < 1:118423/288‑1 (MQ=255)
tttttCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCACCTGCTTTGTTGCATAATGCAGCCGGTCGCCGGAACAATTTAATACGACTGTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCaaa < 1:680611/288‑1 (MQ=255)
tttCCGTGTCAGTTGGTTGCCCTGCTGGCGAGCCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCg < 2:2194892/289‑1 (MQ=255)
tttCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCg > 1:230494/1‑289 (MQ=255)
gtCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCagaa > 1:1639969/1‑289 (MQ=255)
aGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGATCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCATGTAATTTTGCGGCTGACGCATGTTTCCCTACCCGCATCTTCG‑GTGTCGCTTTCGTATCACAACGTTGACTAGGGGTCCAAGCCAcacgatga > 2:354765/1‑281 (MQ=255)
ttgCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCg < 2:523683/288‑1 (MQ=255)
gACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCg > 2:793425/1‑259 (MQ=255)
tGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCaaa > 1:1400221/1‑252 (MQ=255)
aaCTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCAtttt < 2:704644/289‑1 (MQ=255)
aaCTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCAtttt < 1:812077/289‑1 (MQ=255)
cAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTAt > 1:841165/1‑288 (MQ=255)
cAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTAt > 2:1792230/1‑288 (MQ=255)
aGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTcc > 1:1022636/1‑222 (MQ=255)
aGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATc > 2:1042459/1‑288 (MQ=255)
ttCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTcc < 1:230026/220‑1 (MQ=255)
ttCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTcc > 2:230026/1‑220 (MQ=255)
ttCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑AGTTCGCTTTAGGGTCCAGACGTTGGATAGGGGGCAAAGCGACCAGAAGAGCATAGCTGTTGTCCCCtttttctttttcatcccag > 2:1368546/1‑282 (MQ=255)
cGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCAtttt < 2:1160744/279‑1 (MQ=255)
ccTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATa > 1:1559032/1‑289 (MQ=255)
ttttCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGTATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAg < 2:121608/289‑1 (MQ=255)
ttttCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAg < 1:781816/289‑1 (MQ=255)
tctcCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCCCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTTTGGTTGAGGCTTGTTTCACAACCCGCACCTGCT‑ATGTCGCTTTCTGGTCCATACGTTGATTATTGGGCAAAGCGACCATAAGCGCATCGCTTTTCCCCCTGTTTTCATTTTCAATCCACTAATAAGCaa > 2:302966/1‑289 (MQ=255)
gCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAg > 1:264926/1‑289 (MQ=255)
tttCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAgg < 2:1737666/288‑1 (MQ=255)
tAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTAACCAGGAATAAGCAAGATAAGGAAGGTTGTc > 2:654288/1‑288 (MQ=255)
aTGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACt < 1:1066033/289‑1 (MQ=255)
cGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTgg < 2:1832111/286‑1 (MQ=255)
gggcAGAACAATTTAATACGACTTAGAATAGCGTCCTGAAGTATCGGATGGTCGCTGCTTTTAGCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCg < 2:1349695/285‑1 (MQ=255)
cGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCGCAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGa > 1:192816/1‑289 (MQ=255)
cGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCg < 1:2238095/288‑1 (MQ=255)
aGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAg < 1:991481/178‑1 (MQ=255)
aCAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACg < 1:479384/286‑1 (MQ=255)
tttAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCAtttt < 1:1752538/230‑1 (MQ=255)
tACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGa > 1:2156279/1‑235 (MQ=255)
tACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCtggtg > 1:1707078/1‑287 (MQ=255)
cTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACg < 1:523716/164‑1 (MQ=255)
cTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTtctc < 1:1485046/206‑1 (MQ=255)
cTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGc > 1:1239375/1‑273 (MQ=255)
cgcccTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCAACTGCG‑ATGTCGCTTTCGGGTCCAGACGTTGAATAGGGGGCAAAGCTACCAGAACAGCATCGCTTTTTTCCCCTTTTTCATTTTCTATCCCGGATTAAGCCAGATAGGCCAGTTTGTCACTTTGGCTTTCGATACGCAAGCTGGAGGGTTTTTTATTTGCGtt > 2:1145981/4‑289 (MQ=255)
cGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCAtttt < 1:2194307/210‑1 (MQ=255)
cGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGtt > 2:1776700/1‑289 (MQ=255)
cGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGtt > 1:1258152/1‑289 (MQ=255)
gACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTa > 1:543005/1‑289 (MQ=255)
aTCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAAttc > 2:531366/1‑287 (MQ=255)
tCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCg > 1:2116486/1‑289 (MQ=255)
cGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCgt > 2:1643999/1‑289 (MQ=255)
cATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCgtgt > 2:1243700/1‑289 (MQ=255)
tGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGATTTTCTCCCCCTTTTCCTTTTCTTTCCAGGAATAAGCAAGATAAGTCAGTTTGTCACTTTGGTTTTCGTTACGACGGTGGGGGTCTTTTTCATTGGCTTTAATCATaagccggtttc > 2:1903183/1‑280 (MQ=255)
ggTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGC‑TTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGa > 1:410959/1‑289 (MQ=255)
tggctgcggtggtCCGGGGCGGGGGGAATGTCGCGCAGAGTGTAGAGAAAGAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCGTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGa < 2:1573172/276‑1 (MQ=255)
tCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGa > 1:88885/1‑288 (MQ=255)
tCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGa < 2:2096603/288‑1 (MQ=255)
tCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGa < 2:841165/288‑1 (MQ=255)
tCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGAt < 2:1296885/289‑1 (MQ=255)
gctgctTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCg > 1:1581019/1‑289 (MQ=255)
gctgctTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCg > 2:441914/1‑289 (MQ=255)
tgctTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCggg < 1:2013080/289‑1 (MQ=255)
aTCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCt > 2:2165385/1‑244 (MQ=255)
cggtaggcgtgcgaATTTCGGGCCATTTGCAGAAAACTAGCGTTTCACGACCGCCAGGTACTTGTGTGGTTGAGGATTGTTTCACAACCCG‑ACCCGGCGATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCgc < 2:1204097/277‑1 (MQ=255)
cGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCAtttt < 1:1357979/176‑1 (MQ=255)
cGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTg < 1:610092/250‑1 (MQ=255)
ggAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCGTTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCgcag < 1:1154330/289‑1 (MQ=255)
gAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCgcagc > 1:1119332/1‑289 (MQ=255)
aGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCgcagca > 2:186556/1‑289 (MQ=255)
gcgcATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTg < 1:1692559/232‑1 (MQ=255)
gcATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCGCAGCATTGCAACCCAAGCTGa < 1:186556/288‑1 (MQ=255)
gttcgAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGTCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCGCAGCATTGCAACCCAAGCTGATGGTTaa < 2:1925941/285‑1 (MQ=255)
gTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCGCAGCATTGCAACCCAAGCTGATGGTTaac < 2:1707078/289‑1 (MQ=255)
gTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTACCAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCGCAGCATTGCAACCCAAGCTGATGGTTaac < 2:1317379/289‑1 (MQ=255)
aGAAAAATAGCGTTTCGCGACCGCCAGGTAATTGTTTGGTTGAGGCTTGTTTCACAACACGCACCGGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTGTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCGCAGCATTGCAACCCAAGCTGATGGTTaaca < 2:1532256/288‑1 (MQ=255)
aaaTAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCGCAGCATTGCAACCCAAGCTGATGGTTAACAACAtt < 1:776598/289‑1 (MQ=255)
gCGTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCGCAGCATTGCAACCCAAGCTGATGGTTAACAACATTAAggg > 2:1526547/1‑289 (MQ=255)
ttttCGCGATCGTCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTGTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCGCAGCATTGCAACCCAAGCTGATGGTTAACAACATTAAGGGt < 1:2096957/287‑1 (MQ=255)
gTTTCGCTGTCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCAGCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCGCAGCATTGCAACCCAAGCTGATGGTTAACAACATTAAGGGTa < 2:2060754/289‑1 (MQ=255)
gTTTCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCGCAGCATTGCAACCCAAGCTGATGGTTAACAACATTAAGGGt < 1:2068905/288‑1 (MQ=255)
ttCGCGATCGCCAGGTAATTGTGTGGTTGAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCGCAGCATTGCAACCCAAGCTGATGGTTAACAACATTAAGGGTaa < 2:1404554/288‑1 (MQ=255)
gcgATCGCCAGGTAATTGTGTGGTTTAGGCTTGTTTCACAACCCGCACCTGCG‑ATGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCGCAGCATTGCAACCCAAGCTGATGGTTAACAACATTAAGGGTAATCCt < 1:950688/289‑1 (MQ=255)
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TGGGAGAACGCCTTTTTCATTTCTCCCCAGATAGGCAATGGTCAGATAATACGCGGTAGGATTTTTCAGTGTCAGTTGGTTGCCCTGCTGGCTGACCTGTAACTGCAGTTCGACCTTTTCTCCTGCTTTCTTGCGTAATGCAGCCGGTCGCCAGAACAATTTAATACGACTTTGAATAGCGACCTGAAGTATCGCATGGTCGCTGCTTTTATCCGGAGCGGGAGGAATTTCGCGCATATTGTAGAAAAATAGCGTTTCGCGATCGCCAGGTAATTGTGTGGTACTGGCTTGTTTCACAACCCGCACCTGGC‑TTGTCGCTTTCGGTTCCAGACGTTGAATAGGGGGCAAAGCGACCAGAAGAGCATCGCTTTTCTCCCCTTTTTCATTTTCTATCCAGGAATAAGCAAGATAAGGCAGTTTGTCACTTTGGTTTTCGATACGCAGGCTGGTGGCTTTGTCATTGGCGTTAAACACAATGCGTGTGCGATCGGGTTGCACCGCAGCATTGCAACCCAAGCTGATGGTTAACAACATTAAGGGTAATCCTTTAATAAATGTCATT > CP042583/611981‑612542
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A