Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
4926 |
296.4 |
4517418 |
96.8% |
4372860 |
264.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
692,384 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 692,384 | 0 | G | C | 99.7%
| 734.8
/ NA
| 314 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base C (157/156); total (158/156) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01 |
| * | CP042583 | 692,385 | 0 | C | G | 99.4%
| 727.8
/ NA
| 314 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (2/0); new base G (156/156); total (158/156) |
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 692,386 | 0 | T | A | 98.7%
| 720.8
/ NA
| 314 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (2/0); major base A (155/152); minor base G (0/4); total (158/156) |
| Fisher's exact test for biased strand distribution p-value = 1.23e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 314 total aligned reads displayed.
GCGCGCACCCACACCGGACGCGTTAGACTAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTACTGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCACTTTTCAGCGTTGCCTGCGCCTGGTCGCG‑GCTGGAGCGGGCATTTTCCAGGTCATTTGCGCTA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACGCTAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTT > CP042583/692112‑692661
|||
acacCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCAtt < 1:1401233/289‑1 (MQ=255)
gACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCCCCACCGCGCGCGTTAACAGCGTGCCATCAGACGTGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTTCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGCTCACGGTTACCGGAACGGTACTTAC‑GCAATTTATCCTGTGCTGACTTCAGCGTTGCCTGCGCCTGGTCGCGCGCT‑GAGCGGGCATGTGCAATGTCATTTgctga > 2:228595/1‑286 (MQ=255)
cgcgTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTgccgaaa > 1:1309217/1‑284 (MQ=255)
aaCGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCt < 1:2116660/288‑1 (MQ=255)
cGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCttt > 1:436547/1‑288 (MQ=255)
gtaccACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAAATCCGCCTGCGCCAGTTGCGCCTGCGCCTTTTCGAGGCTGGCTTTCGCCTGAGCATTGTCCTGTTAACGGTTCCCGGAACGGTACTTAC‑GCAATTTATCCTGTGCTTATTTGCTCGTTGTCTGCGCCTGGTCGCG‑CCAGGAGCCGGCATTTTCCCGCACATTTTC‑CTATATAGTGCGGCCTTGCCACaaact > 2:1406300/4‑284 (MQ=255)
gTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCtt > 1:292355/1‑289 (MQ=255)
gCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTg > 2:526348/1‑288 (MQ=255)
cACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTg < 2:1544680/289‑1 (MQ=255)
tCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAAGTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGACTGAGCGATGTCCGGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGt < 1:146214/289‑1 (MQ=255)
tGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTtata < 1:1496908/289‑1 (MQ=255)
gTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGCCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTCTCCACAACCCTGCCTGGCCGCTAGAGCAGTTCt > 2:2043993/1‑289 (MQ=255)
tGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCt > 1:1841443/1‑288 (MQ=255)
tGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCa < 1:1915079/289‑1 (MQ=255)
ggtccccACCGCGCCCTTTACATGCGGTCCATCTGACGGTGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCa < 2:292355/284‑1 (MQ=255)
cggCTCCACCGCGCGGTTTAACAGCGTGCCATACGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCa < 2:90353/288‑1 (MQ=255)
cACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAg < 2:482755/271‑1 (MQ=255)
aCCGCGCGCGTTAACAGCGTGCTATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCTCG‑CGAGGAGCGGGCATTTTCTAGGTCATTTGCCGAA‑ATAGTTCGGCTTTTCCACCACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATACTCag > 2:2078643/1‑288 (MQ=255)
aCCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCAt > 1:229466/1‑289 (MQ=255)
cgcgcgTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGGCTAGTCATAggc > 1:12605/1‑289 (MQ=255)
cgcgcgTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAggc > 1:35776/1‑289 (MQ=255)
cgcgTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGc < 1:1658095/256‑1 (MQ=255)
gTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCa < 1:2186731/273‑1 (MQ=255)
tAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTgc < 2:1925780/289‑1 (MQ=255)
tGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGGGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGtt > 2:774398/1‑288 (MQ=255)
tGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTTCGGCTTTTCCCAAACCCTTGCTTGCGGTTTGAGTGTTTTTGCGCATCGCCATAGGCGGCTTTCGCCTGt > 2:2024972/1‑287 (MQ=255)
tGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGttt > 2:1646098/1‑289 (MQ=255)
tGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGtt > 2:1756907/1‑288 (MQ=255)
tGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGtt > 2:1993588/1‑288 (MQ=255)
gACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTATCTGCATCGTCCTAGGCCGCTTTCGCCCGTTTCACCGCt > 2:1896384/1‑288 (MQ=255)
ggCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGcc < 1:2193631/271‑1 (MQ=255)
ggCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTgcggcg > 1:622485/1‑289 (MQ=255)
gCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTgcggc > 1:79270/1‑287 (MQ=255)
caactgtgagTCCTGTAAATTCAACTCCGCCGGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGa < 2:943947/280‑1 (MQ=255)
caacgttgagTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTTCCCCTGTTTCACCGCTGCGGCGCCCTg > 2:2216358/10‑288 (MQ=255)
gttgagTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCTGCTTGCGCCTGTTTCCCTCCTTCGGCGGCCCGAGCGa > 2:68008/6‑289 (MQ=255)
gttgagTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGa < 1:1984381/284‑1 (MQ=255)
gttgagTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGa > 1:897136/6‑289 (MQ=255)
tgagTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGCGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCGTTTCCACAACCCTTGCTGGCGGTGATAGAAGTTCTGCGCATCGTCATACGCGGCTTGCGCCTGTTTCCCCGCTGCggccgcgcgcggcgtt > 2:1175356/4‑279 (MQ=255)
gTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGc > 1:500846/1‑215 (MQ=255)
tGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTgg < 2:1439243/210‑1 (MQ=255)
tGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCAt > 1:1006211/1‑289 (MQ=255)
tGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCAt > 1:1539435/1‑289 (MQ=255)
tAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCAtt > 1:1882633/1‑288 (MQ=255)
tAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATACTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCTTCGTCCTAGGGCGCTTGCGCCTGTTCCCCCGCTGCGGCGTCCTGCGCGTTTTCTTTAtg > 2:1722432/1‑287 (MQ=255)
ccGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGc < 2:2175889/289‑1 (MQ=255)
ccGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGc < 1:252098/289‑1 (MQ=255)
ccTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGGTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCaa > 1:1064056/1‑288 (MQ=255)
tGCGGCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGCGCGAGGTCCTGTTCACAGTTACCGGAACGGTACTGAC‑GCAATTTAGCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCa < 1:2027071/289‑1 (MQ=255)
tGCGCCGTTGGCGCCGCCCCCTGTCAGGGGCGGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTAACCGGAACGGTACTGAC‑GCAATTTCTCCTGTGCTGATTTCGGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGTGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCa < 2:540509/289‑1 (MQ=255)
tGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCa < 2:891714/289‑1 (MQ=255)
tGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCa < 1:1180328/289‑1 (MQ=255)
tGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCa < 1:1224409/289‑1 (MQ=255)
gggccctttGCGCCTGCGCCTGTTGAGGGCTGTGTTTCGCCTGGGCGTTTTCCTGTTGACGTTGACCGGAACGGTACTGAC‑GCAATTTAGCCTGTGCTGATTTCAGCGTTGCCTGAGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCa < 2:1841443/281‑1 (MQ=255)
cgcCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCa < 1:53521/211‑1 (MQ=255)
gcCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATc < 1:1646098/288‑1 (MQ=255)
ttGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCa > 1:890445/1‑289 (MQ=255)
tgcgcctgcgccTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGt < 1:2230665/286‑1 (MQ=255)
gcctgcgcctgTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGc < 1:577957/272‑1 (MQ=255)
cctgTTCGAGGCTGGCGTTCGCATGAGCGATGTCCTGTGCACGGTGACCGGGACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCCGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCtg < 2:1252827/289‑1 (MQ=255)
tCGAGGCTGGGTTTCGCCTTGGAGATGTCATGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCa < 2:1309217/289‑1 (MQ=255)
cGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCTCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCCCCGCTGCGGCGGCCTGAGCGCTGTCTTCATTGCGATACCCGGCAAGCATCAGCTCATCCTGCGCCTCTGCCACCGATACACCCGc > 2:1017790/1‑288 (MQ=255)
cGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCAGCt < 1:1756907/289‑1 (MQ=255)
gccgggtgtgtggccTGTTCAGGGTAGCCGG‑ACGGGACCGTCGGCAATTGTGCCTGTGCTGATTTCAGCGGTGCCTGGGCCTGGTCGAG‑CGAGGAGCGGGCATTTTCCAGGTCGTTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTGGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCt < 2:1781231/275‑1 (MQ=255)
gAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGc < 1:1044583/289‑1 (MQ=255)
aGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGc < 2:436547/288‑1 (MQ=255)
tGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCAt < 1:1799673/289‑1 (MQ=255)
tGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGGGCTCCCCAAACACCCCCTTTCGCCtccc > 2:1171985/1‑285 (MQ=255)
tGTCCTGTGCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTTCAGGTCATTTGCCGAA‑ATAGCGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTTCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCCCTGCGGCGCCCGGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGCTCGTACGGCGCCTTTTCCCCCCAAACACCCGCTTTCGCCTGCa > 2:324363/1‑288 (MQ=255)
tGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCca > 2:713311/1‑125 (MQ=255)
tGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAggg < 1:2078643/289‑1 (MQ=255)
ttCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGTTACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCa > 1:459268/1‑289 (MQ=255)
ttCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCACGCATCAGGTCATACTGCGCCTGTCCCACCCAAACACCCGCTTTCCCCCGCATCACGGCa > 2:1533231/1‑289 (MQ=255)
tCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCa < 1:645437/288‑1 (MQ=255)
cACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAAt < 2:253318/289‑1 (MQ=255)
ggTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAAtctc > 1:1549763/1‑289 (MQ=255)
ccGGAACGGTACTGAC‑GCAATTTATCCTTTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGa > 2:1366584/1‑192 (MQ=255)
aCGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACgg > 2:1115837/1‑285 (MQ=255)
aCGGTACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTtg < 1:402926/289‑1 (MQ=255)
tACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCTTAGGCATAGGCTGCTTGCCCCTGTTCCGCCGCCGCCGCGCCCGGAGCGATTTCTTCTTTTCGATACCCGGCAAGCATCAGGTCATAATGCGCCTGTGGCATCGAAAGCCCCGCTTTCGCCTAAATCGGGGCTATCTCAGTCGGCGTGTGa > 2:745989/1‑288 (MQ=255)
tACTGAC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAAt < 1:1421649/272‑1 (MQ=255)
aC‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTTCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGt > 2:461884/1‑289 (MQ=255)
c‑GCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACCACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGt < 1:1954885/288‑1 (MQ=255)
c‑GCAATTTATCCTGGGCTGATTTCGGCGTTGCCGGCGCCTGGTCGCG‑CGGGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGt < 2:623115/288‑1 (MQ=255)
aaTTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCg < 1:90839/241‑1 (MQ=255)
aTTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGcc < 1:1717457/248‑1 (MQ=255)
aTTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATGCGGTCAATCTCATACGGCTTGTGATCCATCTCGc > 1:334701/1‑288 (MQ=255)
aTTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGc > 1:732225/1‑288 (MQ=255)
aTTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGc > 1:71047/1‑288 (MQ=255)
aTTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGc > 1:138916/1‑288 (MQ=255)
aTTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCCGCATCAGGGCAATCTCATCCGGCTTGTGACCCAGTTCGc > 2:1049400/1‑288 (MQ=255)
aTTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTCCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGCTCGc > 1:934471/1‑288 (MQ=255)
gtgctgatttCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATa > 1:1148251/8‑259 (MQ=255)
ggtgatgtCAGCGTTGCCTGCGCCTGGCCGCG‑CGAGGGGCGGGCATTTTCCAGGTCATTTGCCGAA‑AGAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGGTCTGCGCAGAGTCGTAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCGGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGc < 2:1713840/282‑1 (MQ=255)
gctgatttCAGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCCGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTgg > 1:342532/6‑288 (MQ=255)
aGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCa > 2:2193083/1‑184 (MQ=255)
aGCGTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGa > 1:594214/1‑289 (MQ=255)
gTTGCCTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAGTCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGa < 1:2009860/286‑1 (MQ=255)
cTGCGCCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATCGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCa < 2:585210/289‑1 (MQ=255)
gcCTGGTCGCG‑CGAGGAGCGGGCATTTTCCAGGTCATTGGCCGAA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCtt < 1:2058462/289‑1 (MQ=255)
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GCGCGCACCCACACCGGACGCGTTAGACTAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTACTGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGAC‑GCAATTTATCCTGTGCACTTTTCAGCGTTGCCTGCGCCTGGTCGCG‑GCTGGAGCGGGCATTTTCCAGGTCATTTGCGCTA‑ATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACGCTAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTT > CP042583/692112‑692661
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
