Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 692,384 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583692,3840GC99.7% 773.1 / NA 326intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (179/146);  total (179/147)
Fisher's exact test for biased strand distribution p-value = 4.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583692,3850CG99.7% 770.0 / NA 326intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (177/147);  total (179/147)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583692,3860TA99.4% 763.4 / NA 326intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (178/145);  minor base G (0/2);  total (179/147)
Fisher's exact test for biased strand distribution p-value = 2.04e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 327 total aligned reads displayed.

ATCAACATAAGCGCGCACCCACACCGGACGCGTTAGACTAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTACTGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCACTTTTCAGCGTTGCCTGCGCCTGGTCGCGGCTGGAGCGGGCATTTTCCAGGTCATTTGCGCTAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACGCTAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGT  >  CP042583/692102‑692664
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                      
      aTAAGCGCGCACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCa                                                                                                                                                                                                                                                                              <  1:1650444/289‑1 (MQ=255)
               cACCCACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGTCGCAATTTATCCTGTTCTGATTTCAGCGTTGCCTCCGCCTGGTCGCCCGAGGAGCGGGCATTCTcccg                                                                                                                                                                                                                                                                      >  2:805199/1‑286 (MQ=255)
                  ccACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCa                                                                                                                                                                                                                                                                  <  1:2247964/289‑1 (MQ=255)
                  ccACACCGGACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCa                                                                                                                                                                                                                                                                  <  1:2392074/289‑1 (MQ=255)
                          gACGCGTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTgccga                                                                                                                                                                                                                                                          >  2:1824471/1‑286 (MQ=255)
                            cgcgTTAGTGAAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGACCGTGCATTTTCCGGGTCATTTgccgaac                                                                                                                                                                                                                                                        >  2:2414764/1‑284 (MQ=255)
                                       aaCGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCtt                                                                                                                                                                                                                                             <  2:373161/289‑1 (MQ=255)
                                         cGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGCACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTGTCTAGGGCATTTGCCGAAATAGGCCGGCtttt                                                                                                                                                                                                                                           >  2:1262217/1‑289 (MQ=255)
                                                     tGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGACCGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTTCCGAAATCGTGCGGCTTTTCCCCTACCCtt                                                                                                                                                                                                                                >  2:2629384/1‑288 (MQ=255)
                                                     tGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCtt                                                                                                                                                                                                                                >  1:1179366/1‑288 (MQ=255)
                                                          ccTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGc                                                                                                                                                                                                                          <  1:1511803/289‑1 (MQ=255)
                                                               aTTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGc                                                                                                                                                                                                                                               <  1:1256750/263‑1 (MQ=255)
                                                                     gACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTgccga                                                                                                                                                                                                                                                          <  1:408826/246‑4 (MQ=255)
                                                                     gACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTgccga                                                                                                                                                                                                                                                          >  2:408826/1‑243 (MQ=255)
                                                                     gACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAg                                                                                                                                                                                                               >  1:179268/1‑289 (MQ=255)
                                                                        cGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCca                                                                                                                                                                                                                                        <  2:1906932/261‑1 (MQ=255)
                                                                         gTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCt                                                                                                                                                                                                           >  2:2391061/1‑289 (MQ=255)
                                                                          tGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCt                                                                                                                                                                                                           >  1:539603/1‑288 (MQ=255)
                                                                           gCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTg                                                                                                                                                                                                          <  2:2573985/288‑1 (MQ=255)
                                                                            cgtgggtcacccGCGGGCGTTAACAGCGTGCCATCAGACGGGGCTATCAGCGTTGAGGCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTgcg                                                                                                                                                                                                        <  2:1596644/279‑1 (MQ=255)
                                                                              tGGCTCCACCGCTCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGTTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAAGTTATCATGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCa                                                                                                                                                                                                      <  1:2292202/289‑1 (MQ=255)
                                                                              tGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCa                                                                                                                                                                                                      <  2:2349156/289‑1 (MQ=255)
                                                                                gCTCCACCGCGCGCGGTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTgcgc                                                                                                                                                                                                       <  2:1374490/286‑1 (MQ=255)
                                                                                    cACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGCTTTAAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAAGAGTGCGGCTTTTCCACAACCCTTCCTGGCGCTTATAGAAGTTCTGCGCACAGTCa                                                                                                                                                                                                >  2:2249600/1‑289 (MQ=255)
                                                                                    cACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAAccc                                                                                                                                                                                                                                  >  2:1029606/1‑255 (MQ=255)
                                                                                    cACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCa                                                                                                                                                                                                >  1:835775/1‑289 (MQ=255)
                                                                                    cACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCa                                                                                                                                                                                                >  1:1852599/1‑289 (MQ=255)
                                                                                     aCCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGTGCGGGCATTTTCCAGGTCATTTGCCGGAATAGTGCGGCTTTTCCACAACCTTTGCTGGCGGGTATACAAGTCTCGCGCATAgccct                                                                                                                                                                                               >  2:1445297/1‑285 (MQ=255)
                                                                                        gcgggcgTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAgg                                                                                                                                                                                            <  1:1112550/289‑1 (MQ=255)
                                                                                        gcgcgcgTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAgg                                                                                                                                                                                            <  1:2414052/289‑1 (MQ=255)
                                                                                         cgcgcgTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGc                                                                                                                                                                                                                                               >  2:422277/1‑237 (MQ=255)
                                                                                         cgcgcgTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTTCTGGCGGTTATAGCAGGTCTTCGCATAGTCATAggc                                                                                                                                                                                           >  2:905770/1‑289 (MQ=255)
                                                                                           cgcgTTAACAGCGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCa                                                                                                                                                                                                                                                                  >  2:219328/1‑216 (MQ=255)
                                                                                                      cGTGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCCCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTg                                                                                                                                                                                                                               >  2:478737/1‑240 (MQ=255)
                                                                                                        tGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTgg                                                                                                                                                                                                                           <  2:301917/242‑1 (MQ=255)
                                                                                                        tGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGt                                                                                                                                                                                                                       >  2:2055529/1‑246 (MQ=255)
                                                                                                        tGCCATCAGACGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGt                                                                                                                                                                                                                       <  1:2055529/246‑1 (MQ=255)
                                                                                                                  cGGGGCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTgcg                                                                                                                                                                  <  1:1294962/289‑1 (MQ=255)
                                                                                                                     ggCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCa                                                                                                                                                                                                                                                                  <  2:1728088/190‑1 (MQ=255)
                                                                                                                      gCTATCAACGTTGAGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGccgtgggg                                                                                                                                                               >  2:597932/1‑281 (MQ=255)
                                                                                                                           caacgttgagTCCTGTGAATCCAACTCCGCCTGCGCCGGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGAGGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGa                                                                                                                                                         <  2:1666207/280‑1 (MQ=255)
                                                                                                                           caacgttgagTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGTCGGTTATAGAAGTTCTGCGCACAGTCATAGGCGGCTTGGGCCGTTTTCACCTCTTCGTCGGCCtcg                                                                                                                                                         >  2:2673144/10‑287 (MQ=255)
                                                                                                                               gttgagTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGATGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGcc                                                                                                                                                                                 >  2:2135639/6‑261 (MQ=255)
                                                                                                                                    gTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATttct                                                                                                                                                >  1:2631258/1‑289 (MQ=255)
                                                                                                                                    gTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATttc                                                                                                                                                 <  2:1244257/288‑1 (MQ=255)
                                                                                                                                      ccTGTAAATTCGTCTCCGCCTGCGCCAGTTGCGCCTGCTCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGCTTCACCGCTGCGGCGGCCTGAGCGATttctt                                                                                                                                               <  1:1305914/288‑1 (MQ=255)
                                                                                                                                        tGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTCATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGTTCATTTGCCGAACTAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGGTCTGCGCCTGTTCATAGGCGGCTTGCGCCTGTTTCACCTCTTCGGCGGCCTGAGCGATTTCTTCAt                                                                                                                                            >  2:673409/1‑289 (MQ=255)
                                                                                                                                               tCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGAt                                                                                                                                      >  1:2551954/1‑288 (MQ=255)
                                                                                                                                                          tGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCa                                                                                                                          <  1:384866/289‑1 (MQ=255)
                                                                                                                                                          tGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCa                                                                                                                          <  1:1271810/289‑1 (MQ=255)
                                                                                                                                                          tGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCa                                                                                                                          <  2:2551954/289‑1 (MQ=255)
                                                                                                                                                               cgtttGGGCCTGCGCCTTTTCGAGGCTGGCTTTGGCTTGAGCGATGTCCTGTTCCCGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAgg                                                                                                                     <  2:1179366/286‑1 (MQ=255)
                                                                                                                                                               cAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAgg                                                                                                                     <  1:2714086/289‑1 (MQ=255)
                                                                                                                                                                  ttGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCCGCCAGCATCAGGTCa                                                                                                                  >  1:68186/1‑289 (MQ=255)
                                                                                                                                                                   tgcgcctgggccTGTTCGGGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGACGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGt                                                                                                                    <  2:338107/286‑1 (MQ=255)
                                                                                                                                                                       cctgcgcctgTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCa                                                                                                                                                                                                      >  2:2475786/1‑200 (MQ=255)
                                                                                                                                                                       cctgcgcctgTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCa                                                                                                                                                                                                      <  1:2475786/200‑1 (MQ=255)
                                                                                                                                                                           cgcctgTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGcc                                                                                                                                                                                 <  1:1067033/217‑1 (MQ=255)
                                                                                                                                                                           cgcctgTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCa                                                                                                                          <  2:272142/272‑1 (MQ=255)
                                                                                                                                                                           cgcctgTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTtcgc                                                                                                          >  1:1428926/1‑288 (MQ=255)
                                                                                                                                                                            gcctgTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTgcggcg                                                                                                                                                               <  2:1793132/234‑1 (MQ=255)
                                                                                                                                                                                gTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCtgtg                                                                                                     >  1:2200680/1‑288 (MQ=255)
                                                                                                                                                                                                     gAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATa                                                                                                                <  2:1301008/256‑1 (MQ=255)
                                                                                                                                                                                                                tGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAggg                                                                    <  1:1567826/289‑1 (MQ=255)
                                                                                                                                                                                                                tGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAggg                                                                    <  1:1693871/289‑1 (MQ=255)
                                                                                                                                                                                                                  ttCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCa                                                                                                                                                                                                      <  1:2512592/157‑1 (MQ=255)
                                                                                                                                                                                                                   tCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCa                                                                  <  1:572000/288‑1 (MQ=255)
                                                                                                                                                                                                                    cACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCAGAGTCAGAGGCGGCTTGCGCCTGTTTCGCCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCAGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAAt                                                                <  1:2467019/289‑1 (MQ=255)
                                                                                                                                                                                                                       ggTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCtt                                                                                                                                                                                                                                             <  1:2006512/113‑1 (MQ=255)
                                                                                                                                                                                                                       ggTTACCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGcc                                                                              <  2:108655/272‑1 (MQ=255)
                                                                                                                                                                                                                           aCCGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATAc                                                         <  1:309592/289‑1 (MQ=255)
                                                                                                                                                                                                                            ccGGAACGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACg                                                        >  1:1726988/1‑289 (MQ=255)
                                                                                                                                                                                                                                 aCGGTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTtg                                                   <  1:138638/289‑1 (MQ=255)
                                                                                                                                                                                                                                   ggTACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTtgtg                                                 >  2:842307/1‑289 (MQ=255)
                                                                                                                                                                                                                                     tACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGcc                                                                              >  1:726421/1‑258 (MQ=255)
                                                                                                                                                                                                                                     tACTGACGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGa                                                >  1:778681/1‑288 (MQ=255)
                                                                                                                                                                                                                                          aCGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCa                                                                                                                                                                                                      <  2:1936229/133‑1 (MQ=255)
                                                                                                                                                                                                                                          aCGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCa                                                                                                                                                                                                      >  1:1936229/1‑133 (MQ=255)
                                                                                                                                                                                                                                          aCGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCCGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTGGTGATCCAGt                                          >  1:1903107/1‑289 (MQ=255)
                                                                                                                                                                                                                                           cGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGtt                                         <  1:2684863/289‑1 (MQ=255)
                                                                                                                                                                                                                                           cGCAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGt                                          <  1:2367472/288‑1 (MQ=255)
                                                                                                                                                                                                                                             cAATTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCCTGTCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAAAACCCCCTTTCCCCTCCATCAGGGCCATCCCATCCGGCCTTTGACCCAgccc                                        >  2:1979840/1‑285 (MQ=255)
                                                                                                                                                                                                                                               aTTTATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCa                                                                                                                                                                                                      >  1:2116882/1‑128 (MQ=255)
                                                                                                                                                                                                                                                tttATCCTGTGCTGATTTCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGccc                                    <  1:1000286/289‑1 (MQ=255)
                                                                                                                                                                                                                                                        gtgctgatttCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCCGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCCGCACCTg                            >  1:2171450/8‑289 (MQ=255)
                                                                                                                                                                                                                                                         tgctgatttCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGcc                                     >  1:367290/7‑279 (MQ=255)
                                                                                                                                                                                                                                                          gctgatttCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAAt                                                                >  2:652324/6‑251 (MQ=255)
                                                                                                                                                                                                                                                          gctgatttCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAAt                                                                <  1:652324/246‑1 (MQ=255)
                                                                                                                                                                                                                                                          gctgatttCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTgg                           >  1:488681/6‑288 (MQ=255)
                                                                                                                                                                                                                                                          gctgatttCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGCTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCACCAGGGCATACTGCGCCTGTGCCACCCAAACCCCCGCTTTCGCCTGCCTCAGGGCAATCCCATACCGCTTGTTTACCAGTTCgccccgcccccgc                           >  2:569659/6‑285 (MQ=255)
                                                                                                                                                                                                                                                            tgatttCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGcc                         <  1:2313120/285‑1 (MQ=255)
                                                                                                                                                                                                                                                              atttCAGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGTCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCa                                                                  <  2:1875612/244‑1 (MQ=255)
                                                                                                                                                                                                                                                                   aGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCa                                                                  >  1:16168/1‑240 (MQ=255)
                                                                                                                                                                                                                                                                   aGCGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTCCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCCATCTCATACGGCTTGTGATCCAGTTCCCCCAGCCCCTGGccccgcttga                 >  2:1153602/1‑282 (MQ=255)
                                                                                                                                                                                                                                                                     cGTTGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATa               >  1:1889969/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                        tGCCTGCGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCTCCCAGCACCTGGCCCGCTTTGATAGCa            >  2:1520462/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                        tGCCTGAGCCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACg                                                        >  1:1464837/1‑245 (MQ=255)
                                                                                                                                                                                                                                                                               gcCTGGTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCt      <  1:451186/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                   ggTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCCCATACGGCTTGTGATCCAGTTCGCCCATCACCTGGCCCGCTTTGATAGCCACACCCTCGt  >  2:1492342/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                   ggTCGCGCGAGGAGCGGGCATTTTCCAGGTCATTTGCCGAAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCAGACTGCGCCTGTGCCACCGAAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATc                                              >  1:1816333/1‑244 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                      
ATCAACATAAGCGCGCACCCACACCGGACGCGTTAGACTAACGGTAAACACCGTGCCACCTTCATTGAGGACCGTGCCTGGCTCCACCGCGCGCGTTAACAGCGTGCCATCAGACGGGGCTATCAACGTACTGTCCTGTAAATTCAACTCCGCCTGCGCCAGTTGCGCCTGCGCCTGTTCGAGGCTGGCTTTCGCCTGAGCGATGTCCTGTTCACGGTTACCGGAACGGTACTGACGCAATTTATCCTGTGCACTTTTCAGCGTTGCCTGCGCCTGGTCGCGGCTGGAGCGGGCATTTTCCAGGTCATTTGCGCTAATAGTGCGGCTTTTCCACAACCCTTGCTGGCGGTTATAGAAGTTCTGCGCATAGTCATAGGCGGCTTGCGCCTGTTTCACCGCTGCGGCGGCCTGAGCGATTTCTTCATTGCGATACCCGGCAAGCATCAGGTCATACTGCGCCTGTGCCACGCTAACACCCGCTTTCGCCTGCATCAGGGCAATCTCATACGGCTTGTGATCCAGTTCGCCCAGCACCTGGCCCGCTTTGATAGCATCACCTTCGT  >  CP042583/692102‑692664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A