Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 794,435 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583794,4350GC99.6% 571.6 / NA 244intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (121/121);  total (122/122)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583794,4360CG99.6% 569.8 / NA 244intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (121/120);  total (122/122)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583794,4370TA99.6% 569.7 / NA 244intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (122/121);  minor base G (0/1);  total (122/122)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 244 total aligned reads displayed.

TAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGACTCTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCGCTAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGACGGAACGGACGGTTTTGCAGATCCACCTTGTTGATATGATCAAAAATGATCTCAGT  >  CP042583/794157‑794713
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                    
tAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGt                                                                                                                                                                                                                                                                              >  2:1834280/1‑289 (MQ=255)
tAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGt                                                                                                                                                                                                                                                                              >  1:271866/1‑289 (MQ=255)
  gCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGTTGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGt                                                                                                                                                                                                                                                                              <  1:1142456/287‑1 (MQ=255)
  gCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCCGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCTTCACGGCGGGCAATCAGAAGCACTTCCGAAGCGGTGTTa                                                                                                                                                                                                                                                                            >  2:908961/1‑289 (MQ=255)
    cGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTa                                                                                                                                                                                                                                                                            <  1:1605235/287‑1 (MQ=255)
       tttCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGATGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAg                                                                                                                                                                                                                                                                       >  1:69374/1‑289 (MQ=255)
                ccagCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGGGAATCAGATGCACTTCCGAAGCGACGTTAGACAGATACAggt                                                                                                                                                                                                                                                               >  2:153750/1‑286 (MQ=255)
                           tCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACcg                                                                                                                                                                                                                                                   <  1:107515/289‑1 (MQ=255)
                                         aTTCGGGCTGTGACCTATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTgccg                                                                                                                                                                                                                                        <  1:2007631/286‑1 (MQ=255)
                                                  gtgACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGAc                                                                                                                                                                                                                                                                         <  1:1047866/244‑1 (MQ=255)
                                                  gtgACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGAc                                                                                                                                                                                                                                                                         >  2:1047866/1‑244 (MQ=255)
                                                  gtgACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGAcc                                                                                                                                                                                                                            >  2:401794/1‑289 (MQ=255)
                                                  gtgACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGGTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGAc                                                                                                                                                                                                                             >  2:2017156/1‑288 (MQ=255)
                                                    gACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATgcacg                                                                                                                                                                                                                           >  1:1958937/1‑284 (MQ=255)
                                                    gACCGATAGCAACAAACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGc                                                                                                                                                                                                                          <  1:1556545/289‑1 (MQ=255)
                                                     aCCGAGAGCAACAAACGGACCGGCAACGTCGGGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGc                                                                                                                                                                                                                          <  2:1977615/288‑1 (MQ=255)
                                                             caaccaacAGGCCGGCAACGTCGAGTGACTCGATGTTATCTCTGTTTTGCGTATCGCGCAAACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTg                                                                                                                                                                                                                 <  2:128728/289‑1 (MQ=255)
                                                             caacaaACAGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTg                                                                                                                                                                                                                 >  1:904199/1‑289 (MQ=255)
                                                               acaaacaGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGATGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGt                                                                                                                                                                                                               <  2:69374/289‑1 (MQ=255)
                                                               aacaacaGACCGGCAACGTCGAGTGGTTCTATGTTATCGCTGGTTTGCTTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGt                                                                                                                                                                                                               <  2:419152/286‑1 (MQ=255)
                                                                caaacaGACCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGCACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCCCGGAAACCGTCCCGGCGGTGCATCAGCTTCACTTCAGAAGCGACGTTAGACAGATACAGCGCCCCTTCAACCGCGGTCTTGCCGCCGCCTATGACCGCAACTTTCTGGtt                                                                                                                                                                                                              >  2:1510361/1‑289 (MQ=255)
                                                                       aCCGGCAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTTCCTCCCCCGAGTACCGCAACTTTTGGGTTGctgtga                                                                                                                                                                                                       >  2:1893005/1‑284 (MQ=255)
                                                                            cAACGTCGAGTGACTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAgaagaa                                                                                                                                                                                                  >  1:2168845/1‑289 (MQ=255)
                                                                                              tGTTATCGCGGTTTTGCGTATCGCGCAGCCGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTGATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGcac                                                                                                                                                                                 <  2:2049247/288‑1 (MQ=255)
                                                                                                  aTCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCa                                                                                                                                                                            >  1:733274/1‑289 (MQ=255)
                                                                                                  aTCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTAAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGTTTGCGAAAGAAGAAACCGTCGCAGGGTGCACAAGCa                                                                                                                                                                            >  2:521195/1‑289 (MQ=255)
                                                                                                      cTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGaaa                                                                                                                                                                        >  1:210322/1‑289 (MQ=255)
                                                                                                             gCGTACCGCCCAGACGAACGCCAGGGACACCCAGTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTGACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACg                                                                                                                                                                 <  2:775576/289‑1 (MQ=255)
                                                                                                              cGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGCTGACCGCAACTTTCTGGTTGCGTTAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACg                                                                                                                                                                 >  2:321223/1‑288 (MQ=255)
                                                                                                                     cgcAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTaa                                                                                                                                                         >  1:130477/1‑289 (MQ=255)
                                                                                                                      gcggacgacCGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTaaa                                                                                                                                                        <  2:614609/286‑1 (MQ=255)
                                                                                                                                gCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCa                                                                                                                                              <  2:130477/289‑1 (MQ=255)
                                                                                                                                    gTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAgg                                                                                                                                          >  2:745835/1‑289 (MQ=255)
                                                                                                                                      gACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAggg                                                                                                                                         <  1:381887/288‑1 (MQ=255)
                                                                                                                                      gACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGGTCTCCCCTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAACCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAggg                                                                                                                                         <  1:1285945/288‑1 (MQ=255)
                                                                                                                                        cacCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCa                                                                                                                                       <  1:1581316/288‑1 (MQ=255)
                                                                                                                                         acCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAgg                                                                                                                                     <  1:1755185/289‑1 (MQ=255)
                                                                                                                                          cccATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTaaa                                                                                                                                                        <  1:2062412/269‑1 (MQ=255)
                                                                                                                                          cccATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCa                                                                                                                                       >  1:713924/1‑286 (MQ=255)
                                                                                                                                          cccATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCa                                                                                                                                       <  2:713924/286‑1 (MQ=255)
                                                                                                                                            cATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCg                                                                                                                                  >  1:2251296/1‑289 (MQ=255)
                                                                                                                                              tttGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCgag                                                                                                                                <  1:745835/289‑1 (MQ=255)
                                                                                                                                               ttgtgcGCAGGTAACTTCTGCCAGCGTACGGTTTGTGTGCAGAAGGTTGTGGCCGTTGTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTGACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCgaga                                                                                                                               <  2:2058851/284‑1 (MQ=255)
                                                                                                                                               ttGATCGCCGGTCACTTCTTCCAGGGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGAAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCgaga                                                                                                                               <  1:1719642/289‑1 (MQ=255)
                                                                                                                                                     gCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGt                                                                                                                         >  1:176798/1‑289 (MQ=255)
                                                                                                                                                                  tcCGGCGTACGTTTGGTGTGCAGAATGATGTTGCCGTTGTCCTCTTTATCCAGCAGGCGCTTAATGAGGATTTTTGCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCATTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGAGAGCGTGCAGAAGCTCCgg                                                                                                            <  1:644583/289‑1 (MQ=255)
                                                                                                                                                                  tacaggctACGGTTGGTGTGCAGAATGATGTTGCCTGTCTCCACTTTATCCATCAGGCGCCTAATGTGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCAAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCgg                                                                                                            <  2:241290/282‑1 (MQ=255)
                                                                                                                                                                   ccAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCACGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCg                                                                                                                                                                                           <  1:181897/209‑1 (MQ=255)
                                                                                                                                                                      gCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGc                                                                                                        >  2:633959/1‑289 (MQ=255)
                                                                                                                                                                        gTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCa                                                                                                       <  1:501904/288‑1 (MQ=255)
                                                                                                                                                                            ggTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACgg                                                                                                                                                                <  1:1026582/227‑1 (MQ=255)
                                                                                                                                                                            ggTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACgg                                                                                                                                                                >  2:1026582/1‑227 (MQ=255)
                                                                                                                                                                            ggTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGTGCAGGCCTAGATAGCGTGCAGAAGCTCCGGTGGCaataa                                                                                                   >  2:1184536/1‑288 (MQ=255)
                                                                                                                                                                               tGGTGTGTCGAATAATGTTGCCTTGCTCCTCGTATTCCATCAGGCGCTTAATGAGGATTTGTACCGCGCGGAAACCATCACGGCGGGCAATCAGATGCACGTCCGAAGCGATGTTAGGCATATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGTTCGCAATAGTCAg                                                                                               <  2:1463437/289‑1 (MQ=255)
                                                                                                                                                                                 gtgtGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAgc                                                                                              >  1:801006/1‑288 (MQ=255)
                                                                                                                                                                                 gtgtGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTGTAAAGGCTTCTTCAGCGGGCAGGCCGAGACACCGTGCCGAAGCTCCGGTGTCCATAATccga                                                                                              >  2:1667100/1‑285 (MQ=255)
                                                                                                                                                                                   gtgCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGCAGCTCCGGTGGCAATAATCAGcgcg                                                                                           >  2:1078418/1‑289 (MQ=255)
                                                                                                                                                                                     gCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTc                                                                                         <  1:980147/289‑1 (MQ=255)
                                                                                                                                                                                      cAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAATGCTTCTTCAGAGGGCTGGCCGAGCTACCGTGCAGAAGCTCCGGTGGCCATGAGCAGCGCGTc                                                                                         >  2:2249163/1‑288 (MQ=255)
                                                                                                                                                                                      cAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGCCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGTGATAGAGTGCAGAAGCGCCGGTGGCaataacagccgcgtc                                                                                         >  2:1344014/1‑278 (MQ=255)
                                                                                                                                                                                      cAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCCGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTc                                                                                         >  2:1398616/1‑288 (MQ=255)
                                                                                                                                                                                           tgatgTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAACGGCTTCTTCAGAGGGCAGGCCTAGATAGCGTGCAGAAGCTCGGGTGGCAATAATCAGCGCCACGCAAgc                                                                                   >  2:197351/1‑288 (MQ=255)
                                                                                                                                                                                              tgTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAgg                                                                                                                                     <  2:1688521/236‑1 (MQ=255)
                                                                                                                                                                                              tgTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCgg                                                                                                            >  2:359036/1‑261 (MQ=255)
                                                                                                                                                                                              tgTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCgg                                                                                                            <  1:359036/261‑1 (MQ=255)
                                                                                                                                                                                              tgTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTa                                                                                >  1:1542875/1‑289 (MQ=255)
                                                                                                                                                                                                   ccGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTaaa                                                                                                                                                        >  2:868693/1‑212 (MQ=255)
                                                                                                                                                                                                   ccGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAggg                                                                                                                                         >  1:2076836/1‑227 (MQ=255)
                                                                                                                                                                                                   ccGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAggg                                                                                                                                         <  2:2076836/227‑1 (MQ=255)
                                                                                                                                                                                                     gTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCa                                                                                                                                       >  2:1146896/1‑227 (MQ=255)
                                                                                                                                                                                                                tATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCAt                                                               >  2:1482941/1‑288 (MQ=255)
                                                                                                                                                                                                                  tCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGt                                                                                                                                                                                                               >  2:387095/1‑142 (MQ=255)
                                                                                                                                                                                                                  tCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGt                                                                                                                                                                                                               <  1:387095/142‑1 (MQ=255)
                                                                                                                                                                                                                  tCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAgg                                                                                                                                                      >  1:1193881/1‑199 (MQ=255)
                                                                                                                                                                                                                  tCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCCCCGGTGGCAATAATCAGCGCGTCGCCAGTGTATTCGCCGTTATCCCCATTcc                                                            >  2:2100597/1‑288 (MQ=255)
                                                                                                                                                                                                                    aaTCAGGCGCTTATGGAGGATTTTTTCCGCGCGGAACCCGTCGCTGAGGGGAATCAGATGCACTTCCGAAGCGATGTTCGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGa                                                          <  2:176798/288‑1 (MQ=255)
                                                                                                                                                                                                                     aTCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCCAGTGGATTCGCCGTTATTGCAAtctcggc                                                         >  2:1438011/1‑283 (MQ=255)
                                                                                                                                                                                                                       cAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGacgg                                                       >  1:1642146/1‑289 (MQ=255)
                                                                                                                                                                                                                       cAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGacgg                                                       >  1:2199506/1‑289 (MQ=255)
                                                                                                                                                                                                                                aaTGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCTCTTCCGAAGCGATGCTAGACAGATACAGGGCCTCTTCATCCGCGGTATTTCCGCCGCCGCTGACCGCAACTTTCTGGTTGCGATTGAAAAAACCGTCGCAGGTTGCACAAGCAGAAAACCCACGGCCTTTAAAGCATCCTTCAGAGGGCCGGCCCAGATAGCGTGCAGAAGCTCCGGTGGCAATACTCAGCGCGTCGCAAGTGTATCCGCCGTTATCGCTATTCCGccgaaccggagga                                              >  2:1580469/1‑286 (MQ=255)
                                                                                                                                                                                                                                aaTGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCATCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGACGGAacggacgg                                              >  1:837182/1‑289 (MQ=255)
                                                                                                                                                                                                                                aaTGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGACGGAacggacgg                                              >  2:1716250/1‑289 (MQ=255)
                                                                                                                                                                                                                                aaTGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGACGGAacggacgg                                              <  2:1404150/289‑1 (MQ=255)
                                                                                                                                                                                                                                    aGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGTCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGGATTCGCCGTTATCGGCATTCAGACGGAAAGGACGGgttt                                          >  2:273058/1‑289 (MQ=255)
                                                                                                                                                                                                                                    aGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGACGGAACGGACGGtttt                                          >  1:1387588/1‑289 (MQ=255)
                                                                                                                                                                                                                                      gATTTTTTCCGCGAGGAACACGTCACGGCGGTGAATAAGCGGAGCTTCCGAAGCGATGTTAGACACATCCAGCTCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCGGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGACGGAACGGACGGTTTTg                                         <  2:540231/288‑1 (MQ=255)
                                                                                                                                                                                                                                          ttttCCGCGGGGAAACCGTAACGGCGGTGAATCAGTTGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGACGGAACGGACGGTTTTGCAGAt                                    <  2:2168845/289‑1 (MQ=255)
                                                                                                                                                                                                                                          ttttCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGACGGAACGGACGGTTTTGCAGAt                                    <  1:1438011/289‑1 (MQ=255)
                                                                                                                                                                                                                                           tttCCGAGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGACGGAACGGACGGTTTTGCAGATc                                   <  1:1483000/289‑1 (MQ=255)
                                                                                                                                                                                                                                             gccccgcgGAACCCGTCACGGCGGTAAACCAGATGCACCTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAAACGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGACGGAACGGACGGTTTTGCAGATCCa                                 <  2:1639512/285‑1 (MQ=255)
                                                                                                                                                                                                                                                gcgcgGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCaa                                                                                     >  2:1127515/1‑234 (MQ=255)
                                                                                                                                                                                                                                                gcgcgGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGACGGAACGGACGGTTTTGCAGATCCACCt                              >  1:1659194/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 cgcgGAAACCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCAtt                                                              <  1:189396/256‑1 (MQ=255)
                                                                                                                                                                                                                                                       aaCCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCATCGCGTCGCAAGTGTATTCGCCGTTATCGCTATTCAGACGGAACGGACGGTTTTGCAGATCCACCTTGTTGat                       <  2:837182/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       aaCCGTCACGGCGGTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGACGGAACGGACGGTTTTGCAGATCCACCTTGTTGat                       <  1:401794/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    gTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTTGCAAGTGTACTCGCCGTTATCCGCATTCAGATGGAACGCACGGTTTTGCAGATCCCCCTTGTTGATATGTTCaaaaagt          >  2:1865787/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                    gTGAATCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGACGGAACGGACGGTTTTGCAGATCCACCTTGTTGATATGATCAAAAATg          >  1:1353171/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                        aTCAGATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGTCCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGACGGAACGGACGGTTTTGCAGATCCACCTTGTTGATATGATCAAAAATGAtct      <  1:1865787/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            gATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCTAGTGTATTCGCCGTTATCGCCATTCAGACGGAACGGACGGTTTTGCAGATCCACCTTGTTGATATGATCAAAAATGATCTCAGt  >  1:1395807/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            gATGCACTTCCGAAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATCGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGACGGAACGGACGGTTTTGCAGATCCACCTTGTTGATATGATCAAAAATGATCTCAGt  >  1:1677936/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                    
TAGCCGTTTTCCAGTTCCAGCTGCCCTTCGAAAATCGCAGTATTCGGGCTGTGACCGATAGCAACAAACAGACCGGCAACGTCGAGACTCTCGATGTTATCGCTGTTTTGCGTATCGCGCAGACGAACGCCAGTGACACCCATTTGATCGCCGGTCACTTCTTCCAGCGTACGGTTGGTGTGCAGAATGATGTTGCCGTTCTCCACTTTATCCATCAGGCGCTTAATGAGGATTTTTTCCGCGCGGAAACCGTCACGGCGGTGAATCAGATGCACTTCGCTAGCGATGTTAGACAGATACAGCGCCTCTTCAACCGCGGTATTGCCGCCGCCGATGACCGCAACTTTCTGGTTGCGATAGAAGAAACCGTCGCAGGTTGCACAAGCAGAAACCCCACGGCCTTTAAAGGCTTCTTCAGAGGGCAGGCCGAGATAGCGTGCAGAAGCTCCGGTGGCAATAATCAGCGCGTCGCAAGTGTATTCGCCGTTATCGCCATTCAGACGGAACGGACGGTTTTGCAGATCCACCTTGTTGATATGATCAAAAATGATCTCAGT  >  CP042583/794157‑794713

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A