Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,811,710 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,811,7100AT98.9% 624.6 / NA 265intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (118/144);  minor base G (0/3);  total (118/147)
Fisher's exact test for biased strand distribution p-value = 2.56e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,811,7110CG98.5% 621.3 / NA 265intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (114/147);  minor base T (4/0);  total (118/147)
Fisher's exact test for biased strand distribution p-value = 3.82e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,811,7120TA100.0% 630.5 / NA 265intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (118/147);  total (118/147)

Only 100 of 265 total aligned reads displayed.

AACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGACTATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAAGCTTACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCGAGGTTGTTGGTGGCAGAGCCGATACGTCCGGCTTCTAACATCCCGCCAAAGGCATAGAACACGCCAGAC  >  CP042583/1811434‑1811986
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                   
aaCGTTGTAAAACCAGGGACGCATCCGGAATTTGGTTCCTGTCGCCGGATGCGGATGGAACGCATTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCt                                                                                                                                                                                                                                                                           <  1:1554239/289‑1 (MQ=255)
      gTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCg                                                                                                                                                                                                                                                                     <  1:713583/289‑1 (MQ=255)
      gTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCg                                                                                                                                                                                                                                                                     <  1:1137332/289‑1 (MQ=255)
      gTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCg                                                                                                                                                                                                                                                                     <  2:1640296/289‑1 (MQ=255)
      gTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCg                                                                                                                                                                                                                                                                     <  1:865551/289‑1 (MQ=255)
      gTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCg                                                                                                                                                                                                                                                                     <  1:198657/289‑1 (MQ=255)
      gTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGACTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCg                                                                                                                                                                                                                                                                     <  1:1280933/289‑1 (MQ=255)
       tAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGa                                                                                                                                                                                                                                                                    >  1:1128595/1‑289 (MQ=255)
               gagaCGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGa‑taata                                                                                                                                                                                                                                                           >  1:1765458/1‑289 (MQ=255)
                      aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTCCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGc                                                                                                                                                                                                                                                      <  1:1873448/287‑1 (MQ=255)
                      aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTCCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGc                                                                                                                                                                                                                                                      >  2:1873448/1‑287 (MQ=255)
                      aTCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTAGGCTCCTGTTGCCGGATGCGGCGTGCACGCCTTCTCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACACACTTTCTTAACAGCGGATTTCATTGAATCCAGCGTGACGGAGAAGA‑TAATAATCGcc                                                                                                                                                                                                                                                     >  2:1593957/1‑288 (MQ=255)
                       tCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACCAAACCACACAGATCCTGATGTTATG‑TTCGTTTATTACCGAATGGCGCCCACATTCACCTCATTTCTTACGCGCGTATTTCAGTTAATCCCGCGCCACGGC‑AAGAGTAATAATccacc                                                                                                                                                                                                                                                    >  2:1260456/1‑284 (MQ=255)
                                     ccTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACt                                                                                                                                                                                                                                     <  1:219424/289‑1 (MQ=255)
                                       tGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGc                                                                                                                                                                                                                                   <  2:595428/289‑1 (MQ=255)
                                                     gctgaacagCCTTACCCGGCCATAAAAACCATAAAAATCAGTAGG‑GTGAGCTTATTGTAGGCCGGGTAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTa                                                                                                                                                                                                                      <  2:207466/280‑1 (MQ=255)
                                                     gCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTAc                                                                                                                                                                                                                     >  1:1391702/1‑289 (MQ=255)
                                                          aaCGCCTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGa                                                                                                                                                                                                                >  1:1485909/1‑289 (MQ=255)
                                                                  aTCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCAGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAAGGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCATTTATTCCAGCGCTAAGGCGAAGA‑TAATAATCGCCCCGTTGCTGATGTACCGCCAGTACGGTTTTACGCTGataatagtc                                                                                                                                                                                                        >  2:44601/1‑283 (MQ=255)
                                                                         ccaCAAAACCATCCGAATCAGTATGTTTGAG‑TTATTGTAGGCCGGATAAAACGCGCAAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCa                                                                                                                                                                                                  <  2:1511501/286‑1 (MQ=255)
                                                                         cTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCa                                                                                                                                                                                                       >  1:843390/1‑283 (MQ=255)
                                                                               aaCCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTtga                                                                                                                                                                                           >  1:1062793/1‑289 (MQ=255)
                                                                                aCCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTtgat                                                                                                                                                                                          <  1:441652/289‑1 (MQ=255)
                                                                                 ccATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACTCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCCACCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACTTCAGGCCATATTttatt                                                                                                                                                                                         >  2:1972503/1‑288 (MQ=255)
                                                                                    tACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCt                                                                                                                                                                                                                                                                           <  2:650198/205‑1 (MQ=255)
                                                                                    tACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCt                                                                                                                                                                                                                                                                           >  1:650198/1‑205 (MQ=255)
                                                                                    tACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGt                                                                                                                                                                                                         >  2:873168/1‑270 (MQ=255)
                                                                                         aTCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAg                                                                                                                                                                                                                                                                               <  2:1297679/196‑1 (MQ=255)
                                                                                         aTCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTaaa                                                                                                                                                                                 >  2:2189917/1‑289 (MQ=255)
                                                                                           cAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACt                                                                                                                                                                                                                                     >  1:780706/1‑235 (MQ=255)
                                                                                              tATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACt                                                                                                                                                                                                                                     >  1:149928/1‑232 (MQ=255)
                                                                                              tATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAaataa                                                                                                                                                                            >  1:1342223/1‑289 (MQ=255)
                                                                                                         ttATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCg                                                                                                                                                                                                                                                                     >  1:291563/1‑191 (MQ=255)
                                                                                                         ttATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCgg                                                                                                                                                                   >  2:961021/1‑288 (MQ=255)
                                                                                                             tGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGt                                                                                                                                                                                                         >  2:862566/1‑246 (MQ=255)
                                                                                                             tGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTaaa                                                                                                                                                                                 <  1:1252344/270‑1 (MQ=255)
                                                                                                             tGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTcacc                                                                                                                                                              <  2:1116128/289‑1 (MQ=255)
                                                                                                                aGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACg                                                                                                                                                           <  1:465350/289‑1 (MQ=255)
                                                                                                                  gCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCg                                                                                                                                                                                                                                                       >  1:890327/1‑195 (MQ=255)
                                                                                                                  gCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGcc                                                                                                                                                         >  1:768867/1‑289 (MQ=255)
                                                                                                                    cGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCa                                                                                                                                                                                                  <  2:1799177/246‑1 (MQ=255)
                                                                                                                      gATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGTTGACGGTAAAAATAATTACCCCGGCCACCACGCCaacc                                                                                                                                                     >  2:331782/1‑287 (MQ=255)
                                                                                                                      gATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCACGGTCACCACGCCaaac                                                                                                                                                     >  2:1571691/1‑287 (MQ=255)
                                                                                                                       aTAAAACGCGCCAGCGTTGCATCCGGCATGTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTG‑CAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCAc                                                                                                                                                   <  1:2000159/289‑1 (MQ=255)
                                                                                                                        tAAACCGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCAc                                                                                                                                                   <  1:51548/289‑1 (MQ=255)
                                                                                                                        tAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCAc                                                                                                                                                   <  1:1114384/289‑1 (MQ=255)
                                                                                                                        tAAAACGCGCAAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCAc                                                                                                                                                   <  2:1627359/289‑1 (MQ=255)
                                                                                                                                gcCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGt                                                                                                                                                                                                         <  1:2129091/227‑1 (MQ=255)
                                                                                                                                      gTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCacac                                                                                                                                        <  1:1633372/286‑1 (MQ=255)
                                                                                                                                          cATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACAccgcc                                                                                                                                    >  1:1199682/1‑286 (MQ=255)
                                                                                                                                           atctgtatatatgCTCCTGTCGCTGGACGCGGGCTGAGCTCCTTATCCGTAACACAAAACTCCAAGGATAATGATGTTTTG‑TGCGTTTATGACCGAGTGCGGACCACTTTCTCATCATGTCTGACGTGCGTCTTTAAGTGATTACAGCGCAACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTGCTGCCAGTATGGGTTTACGCCGTCATACGTCAGGCCATAGTTGAGGACGGTAAAGATAATTACCCCGGTCACCACGCCAGTCACCGTCCCCACACCGCCGCt                                                                                                                                 <  2:117699/276‑1 (MQ=255)
                                                                                                                                           aTCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCt                                                                                                                                 <  1:634668/288‑1 (MQ=255)
                                                                                                                                             cgggCATTTGGCTCCTGTCGCCGGATGCGGCGTGCACGCCTTATCCGGACTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGaa                                                                                                                              <  2:1646539/287‑1 (MQ=255)
                                                                                                                                                      ggCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGTTGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGaacgatacac                                                                                                                      >  2:142797/1‑280 (MQ=255)
                                                                                                                                                         tCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCGCACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCa                                                                                                                                                                                                  <  2:771044/209‑1 (MQ=255)
                                                                                                                                                                     aTGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGAAGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCCATGAACCATCCACCCCCCACcacccacg                                                                                                       >  2:1710549/1‑288 (MQ=255)
                                                                                                                                                                      tGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCacgcacgc                                                                                                      >  2:1003666/1‑288 (MQ=255)
                                                                                                                                                                      tGCGGAGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCacgcacgc                                                                                                      <  1:2080617/288‑1 (MQ=255)
                                                                                                                                                                       gcggcgTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCAcgccg                                                                                                    <  1:1972503/289‑1 (MQ=255)
                                                                                                                                                                        cggcgTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCAcgccg                                                                                                    <  2:1128595/288‑1 (MQ=255)
                                                                                                                                                                           cgTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTa                                                                                                                                                                         >  2:731679/1‑216 (MQ=255)
                                                                                                                                                                            gTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGAt                                                                                                <  2:765932/288‑1 (MQ=255)
                                                                                                                                                                                  gCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATcc                                                                                         <  1:331782/289‑1 (MQ=255)
                                                                                                                                                                                       taccGGCCTACAAAGCAACACAAACCATTATGTTATG‑TGCGTTTATGAACGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCGGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTc                                                                                    <  2:1227343/287‑1 (MQ=255)
                                                                                                                                                                                       aTCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTc                                                                                    <  2:2237493/289‑1 (MQ=255)
                                                                                                                                                                                             ccTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTC‑TACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTTATTATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAAAAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGACACCCCGCCTACCACCCCCGCCCCCAAACCACCCAGccccatcaat                                                                             >  2:347497/1‑280 (MQ=255)
                                                                                                                                                                                              cTACAAAACCACACTGATTATGATGTTATT‑TGCGTTTATTACCGACTGCGGACCACATTCTCATCATTTCTTACTCGCGTATTTCAGTGAATCCAGCGCTTCGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATTGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCAGCCATCTcatacat                                                                              <  1:1593957/288‑1 (MQ=255)
                                                                                                                                                                                                 cAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATaaa                                                                           >  2:798490/1‑288 (MQ=255)
                                                                                                                                                                                                    aaccaacaagttCATGAT‑TTATGTTGCGTTTATGACGGAATGCGTACTACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATACTCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCg                                                                       <  2:1896995/278‑1 (MQ=255)
                                                                                                                                                                                                    aaCCAAAAAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCg                                                                       <  1:2245896/289‑1 (MQ=255)
                                                                                                                                                                                                                cATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCg                                                                       <  1:384350/277‑1 (MQ=255)
                                                                                                                                                                                                                cATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCGAGGTTGTtggtg                                                           >  1:1225392/1‑289 (MQ=255)
                                                                                                                                                                                                                        tATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGACTCCAGCGCTACGGCGAATA‑TAATAATCGCCCCTTTGATGATGTACTGCCAATATGGGTTTACGCCGATATACGTCAGGCCATAGGTGATGACGGTAAAAATAATTACCTCGGTCACCACGCCAATCACCGTCCCCACACCGACGCTGAACGATACACCCCCTACCACGAACCCCGCGATAACCTCCAGCCCAACTAACACGCCGAGGGTGTCGGTGGccacgc                                                    >  2:2020875/1‑283 (MQ=255)
                                                                                                                                                                                                                        tATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCg                                                                                                                                                                                                                                                                     <  2:407249/80‑1 (MQ=255)
                                                                                                                                                                                                                        tATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTaaa                                                                                                                                                                                 >  1:2169804/1‑163 (MQ=255)
                                                                                                                                                                                                                        tATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTaaa                                                                                                                                                                                 <  2:2169804/163‑1 (MQ=255)
                                                                                                                                                                                                                        tATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCCCATACACAAAGCCGAGGTTGTGGGTGGCAGAGcc                                                   >  2:2221349/1‑289 (MQ=255)
                                                                                                                                                                                                                        tATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCCCGATCTCATCCAGCCCAAACATAAAGCCGAGCTGGTTGGTGGCAGAGc                                                    >  2:487321/1‑288 (MQ=255)
                                                                                                                                                                                                                          tg‑tgCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGc                                                                                                                                                                                                                   <  2:2121379/127‑1 (MQ=255)
                                                                                                                                                                                                                          tg‑tgCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGt                                                                                                                                                                                                         <  2:1078881/137‑1 (MQ=255)
                                                                                                                                                                                                                          tg‑tgCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCCCCACGCCAACCACCGTCCCCCAACCGCCCTTGACCGACAACCCGCTTACCACGCCCCCCGCCAAGCCATCCAGCCCTGCCAAAACGCCGAGCTTGTtggtgcccacaccaa                                                 >  2:819066/1‑279 (MQ=255)
                                                                                                                                                                                                                          tg‑tgCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCGAGGTTGTTGGTGGCa                                                        <  2:253509/282‑1 (MQ=255)
                                                                                                                                                                                                                          tg‑tgCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCGAGGTTGTTGGTGGCa                                                        >  2:1381539/1‑282 (MQ=255)
                                                                                                                                                                                                                               cGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCGAGGTTGTTGGTGGCa                                                        >  1:2108334/1‑278 (MQ=255)
                                                                                                                                                                                                                                  ttATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGTTGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCGAGGTTGTTGGTGGCAGAGCCGATACGTc                                           <  1:142797/288‑1 (MQ=255)
                                                                                                                                                                                                                                  ttATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCt                                                                                                                                 >  1:1692279/1‑202 (MQ=255)
                                                                                                                                                                                                                                  ttATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCGAGGTTGTTGGTGGCAGAGCCGATACGTc                                           <  2:1485909/288‑1 (MQ=255)
                                                                                                                                                                                                                                    aTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCGAGGTTGTTGGTGGCAGAGCCGATACGTCCgg                                        <  1:961021/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 gACCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCg                                                                                                                    <  1:2061119/200‑1 (MQ=255)
                                                                                                                                                                                                                                                  aCCACATTCACATCATTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCGAGGTTGTTGGTGGCAGAGCCGATACGTCCGGCTTCTAACATccc                           >  2:199242/1‑288 (MQ=255)
                                                                                                                                                                                                                                                     acaTTCACGTCATTTCTTGCGCTAGTATTTCAGGGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCATTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCGAGGTTGTTGGTGGCAGAGCCGATACGTCCGGCTTCTAACATCCCGCCa                       <  2:1199682/289‑1 (MQ=255)
                                                                                                                                                                                                                                                      caTTAACATCATTTCTTACGCGCGTATTTCAGGGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCGAGGTTGTTGGTGGCAGAGCCGATACGTCCGGCTTCTAACATCCCGCCaa                      <  2:1136308/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            catcatTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCCCATACATAAAGCCGAGGTTGTTGGTGGCAGCGCCGATACGTCCGGCTTCTAACATCCCGCCACAGGCaa                >  1:2222013/1‑288 (MQ=255)
                                                                                                                                                                                                                                                              tcatTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCGAGGTTGTTGGTGGCAGAGCCGATACGTCCGGCTTCTAACATCCCGCCAAAGGCATAg              >  1:1933380/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               catTTCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCGAGGTTGTTGGTGGCAGAGCCGATACGTCCGGCTTCTAACATCCCGCCAAAGGCATAGa             <  2:1933380/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   tCTTACGCGCGTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCGAGGTTGTTGGTGGCAGAGCCGATACGTCCGGCTTCTAACATCCCGCCAAAGGCATAGAacac         <  1:1003666/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         gcgcgTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCGAGGTTGTTGGTGGCAGAGCCGATACGTCCGGCTTCTAACATCCCGCCaa                      <  1:749851/270‑1 (MQ=255)
                                                                                                                                                                                                                                                                          cgcgTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑AAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGACTACCCCGCACGCCGCGATAGCATCCAGCCCATCCATAAAGCCGAGGTTGTTGGTGGCAGAGCCGATACGTCCGGCTTCTAACATCCCGCCAAAGGCATAGAACACGCCAAAc  >  1:1954217/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            cgTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTaaa                                                                                                                                                                                 >  1:798504/1‑112 (MQ=255)
                                                                                                                                                                                                                                                                            cgTATTTCAGTGAATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAACGATACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCGAGGTTGTTGGTGGCAGAGCCGATACGTCCGGCTTCTAACATCCCGCCAAAGGCATAGaa            >  1:243429/1‑277 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                   
AACGTTGTAAAACCAGAGACGCATCCGGCATTTGGTTCCTGTCGCCGGATGCGGCTTGAACGCCTTATCCGGCCTACAAAACCATACAAATCAGTATG‑TTGAGCTTATTGTAGGCCGGATAAAACGCGCCAGCGTTGCATCCGGCATTTGGCTCCTGTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATG‑TGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGACTATCCAGCGCTACGGCGAAGA‑TAATAATCGCCCCTTTGATGATGTACTGCCAGTATGGGTTTACGCCGATATACGTCAGGCCATAGTTGATGACGGTAAAAATAATTACCCCGGTCACCACGCCAATCACCGTCCCCACACCGCCGCTGAAGCTTACACCGCCTACCACGCACGCCGCGATAGCATCCAGCTCATACATAAAGCCGAGGTTGTTGGTGGCAGAGCCGATACGTCCGGCTTCTAACATCCCGCCAAAGGCATAGAACACGCCAGAC  >  CP042583/1811434‑1811986

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A