Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,930,578 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,930,5780GC99.6% 609.4 / NA 258intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (147/110);  total (147/111)
Fisher's exact test for biased strand distribution p-value = 4.30e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,930,5790CG99.6% 604.7 / NA 258intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (147/110);  minor base T (0/1);  total (147/111)
Fisher's exact test for biased strand distribution p-value = 4.30e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,930,5800TA100.0% 611.7 / NA 258intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (147/111);  total (147/111)

Only 100 of 258 total aligned reads displayed.

CCAATTCCCGCAGCCAGCGCCGTACCGGAAAGCAGTTGTGTCGGCATCGTCCAGAACACTGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACGCTCGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCA  >  CP042583/1930312‑1930858
                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                      
   aTTCCCGCAGCCAGCGCCGTACCGGAAAGCAGTTGTGTCGGCATCGTCCAGAACACTGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGtt                                                                                                                                                                                                                                                                  >  2:1162065/1‑288 (MQ=255)
          cagccagcGCCGTACCGGAAAGCAGTTGTGTCGGCATCGTCCAGAACACTGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGAACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATACGGCAGGTCCAAAACAAGGACGCAACCCACGGAATGGCGGTGACAACCGACGCGGTAAATCCCACTTTTGTTCCCATCaa                                                                                                                                                                                                                                                          >  1:902024/1‑289 (MQ=255)
                      tACCGGAAAGCAGTTGTGTCGGCATCGTCCAGAACACTGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTg                                                                                                                                                                                                                                              >  1:1313469/1‑289 (MQ=255)
                      tACCGGAAAGCAGTTGTGTCGGCATCGTCCAGAACACTGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTg                                                                                                                                                                                                                                              >  1:1887532/1‑289 (MQ=255)
                      tACCGGAAAGCAGTTGTGTCGGCATCGTCCAGAACACTGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAAAGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATCGCCCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAAGGGCGTTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCGGCTAGGCCGCACCCTg                                                                                                                                                                                                                                              >  2:2242046/1‑289 (MQ=255)
                       aCCGGAAAGCAGTTGTGTCGGCATCGTCCAGAACACTGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGcc                                                                                                                                                                                                                                                                            <  1:1169214/258‑1 (MQ=255)
                                     gtgtCGGCATCGTCCAGAACACTGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACtt                                                                                                                                                                                                                                                                       >  2:1329011/1‑249 (MQ=255)
                                     gtgtCGGCATCGTCCAGAACACTGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACtt                                                                                                                                                                                                                                                                       <  1:1329011/249‑1 (MQ=255)
                                                           tGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAAt                                                                                                                                                                                                                        >  1:608573/1‑274 (MQ=255)
                                                             gCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAAtt                                                                                                                                                                                                                           <  1:21123/269‑1 (MQ=255)
                                                                   cGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTaaa                                                                                                                                                                                                                                                                               >  2:1403550/1‑211 (MQ=255)
                                                                   cGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTaaa                                                                                                                                                                                                                                                                               <  1:1403550/211‑1 (MQ=255)
                                                                    ggCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTc                                                                                                                                                                                                <  1:120450/289‑1 (MQ=255)
                                                                    ggCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTc                                                                                                                                                                                                <  1:69287/289‑1 (MQ=255)
                                                                    ggCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCACGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCTGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTc                                                                                                                                                                                                <  2:524874/289‑1 (MQ=255)
                                                                     gCAAGAAACACGATAGCTGAAAAACACAGAGCTACGAGCGCCATTACGGGAGAAAGCAGCCCGGACAGACCCATACCAAGGCCCGCCGCCAGTAATGTCGGCGCTGCGACATTAAGCCGTTCGCCGGTTTGATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAAGGGCGGTGACCACCGACGCTGTAAAGCCCACGTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTc                                                                                                                                                                                                <  2:1374390/288‑1 (MQ=255)
                                                                         tAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAAtt                                                                                                                                                                                                                           >  2:565013/1‑257 (MQ=255)
                                                                               cgctaccTGCAACAAACAGCCCTACGATCGCCATTACTGGAGAAGGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAAt                                                                                                                                                                                     <  2:43581/283‑1 (MQ=255)
                                                                                gATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATc                                                                                                                                                                                    >  1:360768/1‑289 (MQ=255)
                                                                                   aacTGCAACACACAGCGATACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCt                                                                                                                                                                                 <  1:1029682/287‑1 (MQ=255)
                                                                                   aGCTCCAACACACCACCCTCCGATCGCCAGAACTGCAGAAAGCAGCCCCGACAGACCAAGACCAACGCCCGCCGCAAGTCATGTCAGCGCTGCGACTTTACGCCGTTCGCCGGTTTAATCGGAATAGCGCGGAATAAGCCAGGTCCCACACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCt                                                                                                                                                                                 <  2:1215095/289‑1 (MQ=255)
                                                                                    gccacAACACAGAGCGGTACGATCGCCATTACTGGAGAAAGCGGCCAGGACAGACCAATACCAATGCCCGCAGGCAGTAAGGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCt                                                                                                                                                                                 <  2:2185901/284‑1 (MQ=255)
                                                                                      tGCAACACACAGCGCTACGATCGCCATTACGGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTa                                                                                                                                                                                <  1:1493418/287‑1 (MQ=255)
                                                                                      caaaacaaccggcgaTACAAGCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCt                                                                                                                                                                                 <  2:556847/275‑1 (MQ=255)
                                                                                             cacaGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGa                                                                                                                                                                       <  1:1664340/289‑1 (MQ=255)
                                                                                                aGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGaa                                                                                                                                                                                                     >  1:1771210/1‑256 (MQ=255)
                                                                                                aGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGaa                                                                                                                                                                                                     <  2:1771210/256‑1 (MQ=255)
                                                                                                  cgcTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCg                                                                                                                                                                   >  2:592429/1‑288 (MQ=255)
                                                                                                   gcTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTGTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTc                                                                                                                                                                    <  2:2171557/286‑1 (MQ=255)
                                                                                                     tACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGAcctggc                                                                                                                                                                 >  1:1691943/1‑282 (MQ=255)
                                                                                                     tACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCa                                                                                                                                                               >  1:24400/1‑289 (MQ=255)
                                                                                                      aCGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTCGATAATCTCTAGTTCCCAGACTCGGCCAt                                                                                                                                                              >  2:1729221/1‑289 (MQ=255)
                                                                                                            gCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCa                                                                                                                                                        >  1:1117275/1‑289 (MQ=255)
                                                                                                                      gagaAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGc                                                                                                                                               >  1:847697/1‑288 (MQ=255)
                                                                                                                      gagaAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGc                                                                                                                                               >  1:574611/1‑288 (MQ=255)
                                                                                                                        gaAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCa                                                                                                                                            >  2:746988/1‑289 (MQ=255)
                                                                                                                                              taccaatGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCtgttg                                                                                                                      >  1:156310/1‑289 (MQ=255)
                                                                                                                                                   atGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGt                                                                                                                                                                                                 >  2:2024605/1‑209 (MQ=255)
                                                                                                                                                   atGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTc                                                                                                                                                                    >  2:701716/1‑238 (MQ=255)
                                                                                                                                                   atGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACTCAGCGCAGCGCTCAGCCGAAAAGTCACTTTTTGTTGttct                                                                                                                  >  2:1314063/1‑288 (MQ=255)
                                                                                                                                                   atGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGttct                                                                                                                  >  1:341810/1‑288 (MQ=255)
                                                                                                                                                   atGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCAAGACTCGGCCATTACGCAGCACCTCGCTCAGCCGAGAATGCACTTTCtgttgtgcg                                                                                                                  >  2:1746553/1‑285 (MQ=255)
                                                                                                                                                    tGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGttcttc                                                                                                                >  1:2180263/1‑289 (MQ=255)
                                                                                                                                                     gCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGttcttc                                                                                                                >  1:1345119/1‑288 (MQ=255)
                                                                                                                                                     gCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCa                                                                                                               <  1:2242046/289‑1 (MQ=255)
                                                                                                                                                     gCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCa                                                                                                               <  2:331998/289‑1 (MQ=255)
                                                                                                                                                        cgccgcCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACtt                                                                                                            >  2:2117044/1‑289 (MQ=255)
                                                                                                                                                                        aGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAAAAGTCACTTTCTGTTGTTCTTCACTTTCCCGTTGGTTGATaa                                                                                            >  2:601280/1‑289 (MQ=255)
                                                                                                                                                                           gcTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCa                                                                                         >  2:1071135/1‑289 (MQ=255)
                                                                                                                                                                           gcTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCa                                                                                         <  1:746988/289‑1 (MQ=255)
                                                                                                                                                                                      aCGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGc                                                                                                          >  2:258792/1‑261 (MQ=255)
                                                                                                                                                                                      aCGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGc                                                                                                          <  1:258792/261‑1 (MQ=255)
                                                                                                                                                                                            ttCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGaa                                                                                                                                                                                                     <  1:563723/164‑1 (MQ=255)
                                                                                                                                                                                            ttCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATg                                                                                                                                                                                                   >  2:1854553/1‑166 (MQ=255)
                                                                                                                                                                                            ttCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATg                                                                                                                                                                                                   <  1:1854553/166‑1 (MQ=255)
                                                                                                                                                                                            ttCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGt                                                                                                                                                                                                 <  2:1889361/168‑1 (MQ=255)
                                                                                                                                                                                            ttCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTa                                                                        >  1:2186573/1‑289 (MQ=255)
                                                                                                                                                                                                     tttATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCAACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGaaaa                                                               <  2:360768/289‑1 (MQ=255)
                                                                                                                                                                                                      ttATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAAc                                                              >  1:540889/1‑289 (MQ=255)
                                                                                                                                                                                                          cGGAATAGCGCGGAATAAGCCAGGTCCCAATCAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTCATCCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGc                                                          <  1:713304/289‑1 (MQ=255)
                                                                                                                                                                                                           ggAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGcc                                                         <  2:793511/289‑1 (MQ=255)
                                                                                                                                                                                                              aTAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACg                                                                                                                                                          >  1:1779664/1‑189 (MQ=255)
                                                                                                                                                                                                                  cgcgGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCg                                                  >  2:543468/1‑289 (MQ=255)
                                                                                                                                                                                                                  cgcgGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCg                                                  >  1:1292141/1‑289 (MQ=255)
                                                                                                                                                                                                                     ggAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGgtg                                               <  1:1162065/289‑1 (MQ=255)
                                                                                                                                                                                                                       aaTAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGt                                                                                                                                                                                                                    >  1:295673/1‑122 (MQ=255)
                                                                                                                                                                                                                       aaTAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCgag                                                                                                                                      >  1:1903560/1‑200 (MQ=255)
                                                                                                                                                                                                                       aaTAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGttga                                                                                                   >  1:395711/1‑235 (MQ=255)
                                                                                                                                                                                                                       aaTAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGttga                                                                                                   <  2:395711/235‑1 (MQ=255)
                                                                                                                                                                                                                       aaTAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATAGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGgtgtg                                             >  1:1267007/1‑289 (MQ=255)
                                                                                                                                                                                                                           aGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGtcat                                         <  1:794845/289‑1 (MQ=255)
                                                                                                                                                                                                                            gCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACTCAGCGCATCGCTCAGCCGAGAAGTCCCTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTTTTTACTCAGAAAAAGTGCCTGCTCCGGTGTGtcttc                                        >  2:2158076/1‑289 (MQ=255)
                                                                                                                                                                                                                              cAGGTCCCAAACACGGCCGCAACCCTCGTAATGGCGGTAACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGTCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGtcatca                                       <  1:79351/288‑1 (MQ=255)
                                                                                                                                                                                                                                 gTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGtt                                                                                                                                                                                                                                                                  >  2:1495526/1‑66 (MQ=255)
                                                                                                                                                                                                                                 gTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGcc                                   >  1:215218/1‑289 (MQ=255)
                                                                                                                                                                                                                                 gTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGcc                                   >  2:649557/1‑289 (MQ=255)
                                                                                                                                                                                                                                 gTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGcc                                   >  1:6469/1‑289 (MQ=255)
                                                                                                                                                                                                                                 gTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGcc                                   >  1:206351/1‑289 (MQ=255)
                                                                                                                                                                                                                                 gTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGcc                                   >  1:1464561/1‑289 (MQ=255)
                                                                                                                                                                                                                                 gTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGcc                                   >  1:2205765/1‑289 (MQ=255)
                                                                                                                                                                                                                                 gTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCCCTAGTTGCCCTACTCGGCCATTACGCAGCCCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAACCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCACCGGTTAGTCCTCAAGc                                    >  2:1283071/1‑288 (MQ=255)
                                                                                                                                                                                                                                   cccAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCaa                                 <  1:444321/289‑1 (MQ=255)
                                                                                                                                                                                                                                     cAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGGAACTTTCTGTTGTTCTTAACTTGCCAGTTGATGTATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCGTAGTCTGGTGTTTCATAAAGGCcaaa                               >  2:1944633/1‑289 (MQ=255)
                                                                                                                                                                                                                                      aaaCAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTc                                                    >  1:2010297/1‑267 (MQ=255)
                                                                                                                                                                                                                                      aaaCAAGGCCGAAACCCACGGAATGGCGGTGACCACCGAAGATGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGGAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAg                              <  2:1574032/289‑1 (MQ=255)
                                                                                                                                                                                                                                      aaaCAACGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACGTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAg                              <  2:1675623/289‑1 (MQ=255)
                                                                                                                                                                                                                                       aaCAAGGCCGCAACCCGCGGAAGGGGGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGGAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGa                             <  2:1996878/289‑1 (MQ=255)
                                                                                                                                                                                                                                            ggCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTTAGAAAACGTGCCTGCTCCGGTGTTTCCACAAGCCAAAAGAAggtg                        >  2:866869/1‑289 (MQ=255)
                                                                                                                                                                                                                                              ccGCAACCCCCGGAATTGCGGTGACCACCGACCCTGTAAAGCCCACTTGTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGaa                      <  2:24400/289‑1 (MQ=255)
                                                                                                                                                                                                                                              ccGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGaa                      <  2:206351/289‑1 (MQ=255)
                                                                                                                                                                                                                                              ccGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGaa                      <  2:811499/289‑1 (MQ=255)
                                                                                                                                                                                                                                              ccGCAAACCACGGAATGACGGTACCCACCTACGCTTGAAAGCCTACTTTTGTGCCCAGAAATGCCGCAACCTGGGTCGGAAGGAAGCAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTGGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGaa                      <  2:2196852/289‑1 (MQ=255)
                                                                                                                                                                                                                                               cGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGaa                      <  2:1292141/288‑1 (MQ=255)
                                                                                                                                                                                                                                               cGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGaa                      <  1:1733285/288‑1 (MQ=255)
                                                                                                                                                                                                                                               cGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGaa                      <  1:1071135/288‑1 (MQ=255)
                                                                                                                                                                                                                                                 cAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGc                                                          <  2:147208/250‑1 (MQ=255)
                                                                                                                                                                                                                                                 cAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATa                    >  2:1654612/1‑288 (MQ=255)
                                                                                                                                                                                                                                                  aaCCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATAcc                  <  1:1597166/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                cGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCGGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGGGCCTGCCTCGGTGTGTCATTAAGCCAAAAGAATGTGAAAACACAAAGACCGACTg     >  2:475464/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                cGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATAGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACTTGCCTGCTCCGGTGTGTCCTCAAGCCAAAAGAATGTGAAAAACCCAGAACCGACTg     >  2:1176652/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                      
CCAATTCCCGCAGCCAGCGCCGTACCGGAAAGCAGTTGTGTCGGCATCGTCCAGAACACTGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACGCTCGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCA  >  CP042583/1930312‑1930858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A