Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,930,578 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,930,5780GC99.7% 728.9 / NA 307intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (177/129);  total (178/129)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,930,5790CG99.7% 724.2 / NA 307intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (177/128);  total (178/129)
Fisher's exact test for biased strand distribution p-value = 4.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,930,5800TA99.7% 732.5 / NA 307intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (178/128);  minor base C (0/1);  total (178/129)
Fisher's exact test for biased strand distribution p-value = 4.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 308 total aligned reads displayed.

AAACAGGTTTACAAAACCAATTCCCGCAGCCAGCGCCGTACCGGAAAGCAGTTGTGTCGGCATCGTCCAGAACACTGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACGCTCGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGAC  >  CP042583/1930296‑1930853
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                  
    aGGTTTACAAAACCAATTCCCGCAGCCAGCGCCGTACCGGAAAGCAGTTGTGTCGGCATCGTCCAGAACACTGGCTGCACGGCAATAAACCCGATTGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTaa                                                                                                                                                                                                                                                                            >  2:5107/1‑289 (MQ=255)
       tttACAAAACCAATTCCCGCAGCCAGCGCCGTACCGGAAAGCAGTTGTGTCGGCATCGTCCAGAACACTGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTa                                                                                                                                                                                                                                                                             <  1:977072/285‑1 (MQ=255)
       tttACAAAACCAATTCCCGCAGCCAGCGCCGTACCGGAAAGCAGTTGTGTCGGCATCGTCCAGAACACTGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTa                                                                                                                                                                                                                                                                             <  1:1187518/285‑1 (MQ=255)
                 cAATTCCCGCAGCCAGCGCCGTACCGGAAAGCAGTTGTGTCGGCATCGTCCAGAACACTGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGt                                                                                                                                                                                                                                                               >  1:121158/1‑289 (MQ=255)
                                                cAGTTGTGTCGGCATCGTCCAGAACACTGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGACGCAACCCACGGAATGGCGGTTACCACCGACGCCGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAgg                                                                                                                                                                                                                                >  2:1943735/1‑289 (MQ=255)
                                                         cgccaccgccaaGACCACTGCCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAAtt                                                                                                                                                                                                                       <  2:699187/278‑1 (MQ=255)
                                                           gCATCGTCCAGAACACTGGCTGCACGGCAATAAACACGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACGACCGACGCCGTAGAGCCCACGTTTGTTCCCAGCAATGCCGCAACCAGGCTAGGACGGAAGAAAATTaa                                                                                                                                                                                                                     >  2:1241289/1‑289 (MQ=255)
                                                                       acacGGGCTGAACGGCAAAAAACCCGATAGCTGCAACACACGGGGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGc                                                                                                                                                                                                         <  2:1622244/289‑1 (MQ=255)
                                                                           tGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCAc                                                                                                                                                                                                      >  1:1622244/1‑288 (MQ=255)
                                                                           tGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCAc                                                                                                                                                                                                      >  2:1542766/1‑288 (MQ=255)
                                                                           tGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCCCAACCTGGGTCGGCAGGAACAAAATTAATCCGTAAATCGCCAc                                                                                                                                                                                                      >  2:2620530/1‑288 (MQ=255)
                                                                           tGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCAGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCa                                                                                                                                                                                                       >  1:204706/1‑287 (MQ=255)
                                                                                  aCGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGGCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATg                                                                                                                                                                                               <  1:878401/288‑1 (MQ=255)
                                                                                   cGGCAATAAACCCGATTGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGt                                                                                                                                                                                             <  1:5107/289‑1 (MQ=255)
                                                                                     gaaaTAAACCCGATAGCAGCAACACACAGCGCTCCGATCGCCATTCCTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAAGGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTc                                                                                                                                                                                            <  2:1702051/286‑1 (MQ=255)
                                                                                       aaTAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAgg                                                                                                                                                                                         <  1:1007415/289‑1 (MQ=255)
                                                                                                 aTAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGgaa                                                                                                                                                                                                                              <  2:823870/242‑1 (MQ=255)
                                                                                                 aTAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGgaa                                                                                                                                                                                                                              >  1:823870/1‑242 (MQ=255)
                                                                                                   acgtacAACACTGAGCGCGCGGATCGCAATTTCTGGAGACAGCAGGCCGGAAGTACGAATACCAATGCACGCAGCCAGTAATGTAAGCGCTGCTCCATTACACAGTTCGCCGGTTTTATCGGAATAGCGGGGAACAAGCCAGGTCCCAAACAAGTCCGCAACCCACGGAATGGCGGTGACCACCCACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTATATAATCGCt                                                                                                                                                                             <  2:2455889/284‑1 (MQ=255)
                                                                                                        cAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTCATCCGTAAACCGCCACCGGAATGGTCCGGTAGATAACCGCTAGtt                                                                                                                                                                         >  2:2329459/1‑288 (MQ=255)
                                                                                                        cAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGtt                                                                                                                                                                         >  1:527685/1‑288 (MQ=255)
                                                                                                               caGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGAc                                                                                                                                                                  >  1:1965863/1‑288 (MQ=255)
                                                                                                                  cgcTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCg                                                                                                                                                               >  1:1695760/1‑288 (MQ=255)
                                                                                                                  cgcTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCCGTAAAGCCCACTTTTGTTCCCAGCAATGACGCAACCCGGGTCGGCAGGGAGAAAATTAAACCGTACACCGACACCTGAAGGGTCAGGTAAGTTATCGCTAGTTGCCAgtccagg                                                                                                                                                              >  2:1124372/1‑283 (MQ=255)
                                                                                                                   gcTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCgg                                                                                                                                                              >  1:664069/1‑288 (MQ=255)
                                                                                                                     tACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGCTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACATGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCgggcg                                                                                                                                                           >  1:1137717/1‑286 (MQ=255)
                                                                                                                       cGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTc                                                                                                                                                                                            <  2:398086/254‑1 (MQ=255)
                                                                                                                          tCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCa                                                                                                                                                                                                       >  2:1670518/1‑240 (MQ=255)
                                                                                                                            gCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCa                                                                                                                                                    >  1:2612938/1‑289 (MQ=255)
                                                                                                                            gCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCa                                                                                                                                                    <  2:1154511/289‑1 (MQ=255)
                                                                                                                            gCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCa                                                                                                                                                    >  1:2293379/1‑289 (MQ=255)
                                                                                                                            gCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCCGCCCTTACGCa                                                                                                                                                    >  2:1850590/1‑289 (MQ=255)
                                                                                                                            gCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAAACGCTAGTTGCCAGACTCGGCCATTAccg                                                                                                                                                     >  2:903544/1‑286 (MQ=255)
                                                                                                                            gCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCCCAACCTGGCTCGGCCGGCAGAAAATTAAACCCTAACCCGCACCCCTAACGGTCAGGCTGATAAACAACCATTGCCCTACCCGGCCATTAcca                                                                                                                                                     >  2:2400211/1‑286 (MQ=255)
                                                                                                                                       agaAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCt                                                                                                                                         <  1:1542766/288‑1 (MQ=255)
                                                                                                                                        gaAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTcc                                                                                                                                                                                                                                                            <  2:2227622/173‑1 (MQ=255)
                                                                                                                                           agcagcCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGc                                                                                                                                     >  2:2069278/1‑288 (MQ=255)
                                                                                                                                                cccGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGaa                                                                                                                               <  1:2659980/289‑1 (MQ=255)
                                                                                                                                                 ccGGACAGACCAATACCAATGCCCGCCGCAAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAg                                                                                                                              <  1:597354/289‑1 (MQ=255)
                                                                                                                                                        gACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAAc                                                                                                                                                                                                            >  2:2181484/1‑205 (MQ=255)
                                                                                                                                                         accaataccaatGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCAc                                                                                                                                                                                                      <  1:1935902/210‑1 (MQ=255)
                                                                                                                                                         accaataccaatGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACtt                                                                                                                        >  1:215631/1‑287 (MQ=255)
                                                                                                                                                          ccaatgccaatgCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTc                                                                                                                      <  1:2329459/288‑1 (MQ=255)
                                                                                                                                                           caataccaatGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCtg                                                                                                                    <  1:252291/289‑1 (MQ=255)
                                                                                                                                                                gcaatGCCCGCCGCCAGTAATGTCAGCGCTGCGACAGTACGCCGTGCGCCGGTTTTGACGGAATAGCGCGAGATAAGCCAGGTCCCAAACAAGGCCGCAACCCGCGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAAGTAATCCGGAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTgttgtt                                                                                                               <  2:2017011/288‑1 (MQ=255)
                                                                                                                                                                ccaatGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTgttgtt                                                                                                               <  2:1511398/289‑1 (MQ=255)
                                                                                                                                                                   atGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGttct                                                                                                             >  1:744155/1‑288 (MQ=255)
                                                                                                                                                                   atGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACCCGGCCATTACGCAGCGCCACCGC‑CAACCGAGAAGCCACTTTCTGTTGttct                                                                                                             >  2:1011841/1‑288 (MQ=255)
                                                                                                                                                                                  aatatccacgcTGCGACATTACGCCGTTCGCAGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGttgat                                                                                             <  1:2455651/281‑1 (MQ=255)
                                                                                                                                                                                        aGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATaa                                                                                       >  1:311193/1‑289 (MQ=255)
                                                                                                                                                                                          cgcTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGc                                                                                     >  1:186489/1‑289 (MQ=255)
                                                                                                                                                                                           gcTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCa                                                                                    <  1:2214023/289‑1 (MQ=255)
                                                                                                                                                                                           gcTGCGACATTACACCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTc                                                                                                                                                                <  2:187050/214‑1 (MQ=255)
                                                                                                                                                                                             tGCGACATTCCGCCCTTCGCCGGTTTTATCGGAATGCAGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGCCCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAAc                                                                                  <  2:741072/289‑1 (MQ=255)
                                                                                                                                                                                              gCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGGATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAGTGGCGGTGACCACCGACGCTTTACAGCCCACTTTTGTTCCCAGCAATGCCGCAACCGGGGGCGGCAGGGAGAAAATTTATCCGTATACCGCCTCCTGAATGGTCAGGAAGAAAATCGCTCGTGGCCAGACTCGGCCATCACGCAGCG‑AATCGCTCATCCGAGGAGACACCATCAGTTGTTCTGTACTTGCCAGCTGTATTAGAAGCAACg                                                                                 >  2:313524/1‑289 (MQ=255)
                                                                                                                                                                                               cGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGt                                                                                >  1:2475297/1‑289 (MQ=255)
                                                                                                                                                                                               cGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCCCAGCCGAGAAGGCACTTTCCGATGTTCTTCACTTTCCAGTTTATTGATAAGCAACGt                                                                                >  2:2629429/1‑289 (MQ=255)
                                                                                                                                                                                                            ttCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGttctt                                                                                                            <  1:2549598/248‑1 (MQ=255)
                                                                                                                                                                                                            ttCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGttctt                                                                                                            >  2:2549598/1‑248 (MQ=255)
                                                                                                                                                                                                            ttCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGtt                                                                                                <  1:2623411/260‑1 (MQ=255)
                                                                                                                                                                                                            ttCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGttt                                                                    >  1:711025/1‑288 (MQ=255)
                                                                                                                                                                                                              cGCCGGTTTTATCGGAATCTCCCTTCCTAAGCCACCCCCCACCAAAGGCCCCCCCACCCGGCCTGGCGCTGACCACCGACTCCGTAAAGCCCACCTTTGTCTCCAGCAATGCCGCACACTCCCCCCCACGGAACCCCCTTCCTCCGTAAACCGCCACATGAATGGTACCCTACCTAATCGCTAGTTGCCAGACTCGGCCATTACGCAGGC‑GATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTAc                                                                  >  1:1914805/1‑288 (MQ=255)
                                                                                                                                                                                                              cGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTa                                                                   <  1:1302769/287‑1 (MQ=255)
                                                                                                                                                                                                                 cGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCa                                                               <  1:1274239/288‑1 (MQ=255)
                                                                                                                                                                                                                     tgtataGGAATAGCGCGGAATAAGCCATGTCCCAAACAAGGCCGCAACCCACGGAATGGAGGTGACCACCGACGCTGTAAAGCACACTTTTGTTCCCAGCAAGGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCAACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGaaaa                                                          <  2:204706/287‑1 (MQ=255)
                                                                                                                                                                                                                          cGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGc                                                     <  2:116940/289‑1 (MQ=255)
                                                                                                                                                                                                                          cGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGc                                                     <  1:284019/289‑1 (MQ=255)
                                                                                                                                                                                                                             aaTAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGc                                                                                     <  2:1196058/254‑1 (MQ=255)
                                                                                                                                                                                                                               tAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCt                                                <  1:2037074/289‑1 (MQ=255)
                                                                                                                                                                                                                                   gcgGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCg                                             <  1:903544/288‑1 (MQ=255)
                                                                                                                                                                                                                                       aaTAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCtg                                                                                                                    >  2:2495230/1‑213 (MQ=255)
                                                                                                                                                                                                                                       aaTAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCATAAAACGTGCCTGCTCCGgtgtg                                        >  2:2673085/1‑289 (MQ=255)
                                                                                                                                                                                                                                       aaTAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CAGCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGgtgtg                                        >  1:1504074/1‑289 (MQ=255)
                                                                                                                                                                                                                                       aaTAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGCTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCCCTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTAAGAACACGTGCCTACTCCGgtgtg                                        >  2:2074331/1‑289 (MQ=255)
                                                                                                                                                                                                                                           aGCCAGGTCCCAAACAAGGCCGCACCCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGtcat                                    <  1:2410464/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 gTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGc                                                                                                                                                                                                         >  2:611308/1‑119 (MQ=255)
                                                                                                                                                                                                                                                 gTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAAt                                                                                                                                                                                                <  2:1318459/128‑1 (MQ=255)
                                                                                                                                                                                                                                                 gTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTa                                                                                                                                                                            <  2:1791706/148‑1 (MQ=255)
                                                                                                                                                                                                                                                 gTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTa                                                                                                                                                                            >  1:1791706/1‑148 (MQ=255)
                                                                                                                                                                                                                                                 gTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTc                                                                                                                                                                >  1:115498/1‑160 (MQ=255)
                                                                                                                                                                                                                                                 gTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATTAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCCACGGTGTGTCTTTAAGcc                              >  2:532320/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 gTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGcc                              >  1:1017203/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 gTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGcc                              >  1:1344967/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 gTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGcc                              >  1:408224/1‑289 (MQ=255)
                                                                                                                                                                                                                                                      aaaCAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTc                                               <  1:2070669/267‑1 (MQ=255)
                                                                                                                                                                                                                                                      aaaCAAGGCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAg                         >  2:1218612/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            ggCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGcc                                                                                                                                                                                                        >  2:2245320/1‑109 (MQ=255)
                                                                                                                                                                                                                                                            ggCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCCCTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAAAGTGCCTGCCCCGGTGTGTCATCCAGCCAAAAGAAtgtg                   >  2:14063/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            ggCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTc                                                                <  1:1652444/244‑1 (MQ=255)
                                                                                                                                                                                                                                                            ggCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTTCCTGCCCCGGTTGGTCATCAAGCCAAAAGCAcgtg                   >  2:2278094/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            ggCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAAtgtg                   >  1:370797/1‑289 (MQ=255)
                                                                                                                                                                                                                                                             gCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGttga                                                                                              <  2:932596/213‑1 (MQ=255)
                                                                                                                                                                                                                                                             gCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGttga                                                                                              >  1:932596/1‑213 (MQ=255)
                                                                                                                                                                                                                                                             gCCGCAACCCACGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGa                  >  1:1036804/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               cGCAACCCACGGCATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGACACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGaa                 <  1:1458076/288‑1 (MQ=255)
                                                                                                                                                                                                                                                               cGCAACCCACCGAAAGGCGGTGACCACCGACGCTGTAAAGCCAACGTTTGTTCCCAGCAATGCCGCAACCGGGGTCGACAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTGCTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGaa                 <  2:1914805/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                        cGGAATGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGc        >  1:1097018/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                            aTGGCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCg    <  1:1562998/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                              ggCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCTACCTGGGTCGGCAGGAAGATAATTAATCCGTAAACCGCCACCTGAGTGGTCATGTAGATAATCGCTAGTTGCCAGACACGGCCATTACGCAACG‑CATCGGTCAGCCGAGAAGTCCCTTTCTGTTGTTCTTCAGTTGCCAGTTGCTTCATCAGCAACGTTTTTTCTTGTTTAATCAGACAACGTACCTGCCCCGGTCTGTCATACAGGCAAAAGGAGGTGAAATCCCCAGccccaa   >  2:1026255/1‑285 (MQ=255)
                                                                                                                                                                                                                                                                              ggCGGTGACCACCGACGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGGGTGGCATCAAGCCAAAAGAATTTGAATACCCCAGCACCg    >  1:2241207/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                  
AAACAGGTTTACAAAACCAATTCCCGCAGCCAGCGCCGTACCGGAAAGCAGTTGTGTCGGCATCGTCCAGAACACTGGCTGCACGGCAATAAACCCGATAGCTGCAACACACAGCGCTACGATCGCCATTACTGGAGAAAGCAGCCCGGACAGACCAATACCAATGCCCGCCGCCAGTAATGTCAGCGCTGCGACATTACGCCGTTCGCCGGTTTTATCGGAATAGCGCGGAATAAGCCAGGTCCCAAACAAGGCCGCAACCCACGGAATGGCGGTGACCACGCTCGCTGTAAAGCCCACTTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCG‑CATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGAC  >  CP042583/1930296‑1930853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A