Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,935,061 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,935,0610GC100.0% 674.0 / NA 282intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (140/142);  total (140/142)
*CP0425831,935,0620CG99.7% 666.4 / NA 282intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (139/142);  total (140/142)
Fisher's exact test for biased strand distribution p-value = 4.96e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,935,0630TA99.7% 670.1 / NA 282intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (139/142);  minor base C (1/0);  total (140/142)
Fisher's exact test for biased strand distribution p-value = 4.96e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 282 total aligned reads displayed.

TAATGGCAACCCCTGATGAAAGAAAAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCGCTCAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGGCTATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCGAGAGGCAGATTCAACCCCA  >  CP042583/1934782‑1935338
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                   
tAATGGCAACCCCTGATGAAAGAAAAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGAtt                                                                                                                                                                                                                                                                               <  2:883389/288‑1 (MQ=255)
   tGGCAACCCCGGATAAAAGAAAAAAACGGCCAGCCCGGCAGCGTTAATGTCAACAATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACAGACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAgg                                                                                                                                                                                                                                                                           <  2:1859634/289‑1 (MQ=255)
        aCCCCTGATGAAAGAAAAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTCCCGTCTTTACCCGACAGATTACGGTAGCg                                                                                                                                                                                                                                                                      >  2:1514261/1‑289 (MQ=255)
        aCCCCTGATGAAAGAAAAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCg                                                                                                                                                                                                                                                                      >  2:781508/1‑289 (MQ=255)
              aataaaagaaaAAATCGGCCTGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTAGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAAcc                                                                                                                                                                                                                                                                <  1:2133325/285‑1 (MQ=255)
                   aagaaaAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCt                                                                                                                                                                                                                                                           <  1:1487469/289‑1 (MQ=255)
                    agaaaAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTc                                                                                                                                                                                                                                                          >  2:150483/1‑289 (MQ=255)
                    agaaaAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTc                                                                                                                                                                                                                                                          >  1:394885/1‑289 (MQ=255)
                              ggCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATactgact                                                                                                                                                                                                                                                <  1:1688517/289‑1 (MQ=255)
                                ccagccagGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTgg                                                                                                                                                                                                                                              <  2:630630/289‑1 (MQ=255)
                                caagccagGCAGCGTAAGTGTCAACGATTTGCCCGTGTAACACTTCGTCCCCGGGTGATAACATTTCCACTTTGAACATGGTTAGCTCAGGCTTTTGTTATCGAATCAGTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACAGTCGGTCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTgg                                                                                                                                                                                                                                              <  2:1160911/287‑1 (MQ=255)
                                     cgggCATCGTGAGTGTCAACGATTTCACCGTGTAACACTTCTTCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATTTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCa                                                                                                                                                                                                                                         <  2:1046745/287‑1 (MQ=255)
                                     cagGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCa                                                                                                                                                                                                                                         <  2:394885/289‑1 (MQ=255)
                                     cagGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAAGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACg                                                                                                                                                                                                                                           <  2:282251/287‑1 (MQ=255)
                                     aagGCAGCGTTAGGGTAAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCa                                                                                                                                                                                                                                         <  2:1410967/288‑1 (MQ=255)
                                                      aaCGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGGCAGCCACGGCGTTGTCGCGG‑TACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAAcgcgcg                                                                                                                                                                                                                        >  2:2001439/1‑288 (MQ=255)
                                                      aaCGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACCGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAAcgcgc                                                                                                                                                                                                                         >  2:443548/1‑288 (MQ=255)
                                                              gCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCAt                                                                                                                                                                                                                 >  1:1089893/1‑288 (MQ=255)
                                                                 cGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGc                                                                                                                                                                                                             <  1:150483/289‑1 (MQ=255)
                                                                 cGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGc                                                                                                                                                                                                             <  1:2206500/289‑1 (MQ=255)
                                                                     tAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGcttct                                                                                                                                                                                                         <  2:222496/289‑1 (MQ=255)
                                                                        cacTTTCTCCCCGGTGTATAACATTTCCACTTTTAAACTGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACGGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCa                                                                                                                                                                                                      <  2:231956/289‑1 (MQ=255)
                                                                          cTTCATCCCTGGTGGATAACCTTTCCACTTTTCACATAGTTATCTCCCACTTTTGTTAACGAATCGCTAAAACGCAAAGGAAGATAAGGGTTAGTAAGAAACTGAAGGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGACACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATa                                                                                                                                                                                                    <  2:1494678/289‑1 (MQ=255)
                                                                          cTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATa                                                                                                                                                                                                    <  1:2051717/289‑1 (MQ=255)
                                                                             cATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACg                                                                                                                                                                                                                                           >  2:1631/1‑247 (MQ=255)
                                                                             cATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCa                                                                                                                                                                                                                                         <  1:91692/249‑1 (MQ=255)
                                                                             cATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCa                                                                                                                                                                                                                                         >  2:91692/1‑249 (MQ=255)
                                                                               tCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACttt                                                                                                                                                                                               >  1:763359/1‑289 (MQ=255)
                                                                                  ccGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGaa                                                                                                                                                                                            <  2:1129473/289‑1 (MQ=255)
                                                                                         aTAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATAcc                                                                                                                                                                                        >  1:132708/1‑286 (MQ=255)
                                                                                          tAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTg                                                                                                                                                                                    >  1:2107717/1‑289 (MQ=255)
                                                                                                ttCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGagagc                                                                                                                                                                              >  1:971894/1‑288 (MQ=255)
                                                                                                ttCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGagagc                                                                                                                                                                              >  1:137379/1‑288 (MQ=255)
                                                                                                  ccACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGagagcga                                                                                                                                                                            >  1:1347582/1‑286 (MQ=255)
                                                                                                   cACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATa                                                                                                                                                                                                                                       <  1:35724/229‑1 (MQ=255)
                                                                                                   cACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGagagcgaa                                                                                                                                                                           >  2:1342822/1‑285 (MQ=255)
                                                                                                         tAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGga                                                                                                                                                                     <  1:1182407/289‑1 (MQ=255)
                                                                                                          aaCATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACCGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                    <  1:443548/289‑1 (MQ=255)
                                                                                                          aaCATGGTTATCTCCTGCTTGTGTTATCGAATCAATATAACGAAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                    <  1:1546372/289‑1 (MQ=255)
                                                                                                                gTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGagtagt                                                                                                                                                              >  1:1799080/1‑289 (MQ=255)
                                                                                                                    tctcCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAAt                                                                                                                                                           >  1:1209535/1‑288 (MQ=255)
                                                                                                                           cTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGTCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCCATACTGACTGGACGCATAAAGGTGTAACGCGCGCCAGCATTCGCTTCCTCCTAACTTTGAATACCGCTGGAGAGCGAACCCGGAGAGTAGTAATACTCCCca                                                                                                                                                   >  2:2153974/1‑289 (MQ=255)
                                                                                                                           cTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCg                                                                                                                                                      <  2:504972/286‑1 (MQ=255)
                                                                                                                           cTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCca                                                                                                                                                   >  2:1567916/1‑289 (MQ=255)
                                                                                                                                              ataACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTg                                                                                                                                 >  1:1051854/1‑288 (MQ=255)
                                                                                                                                                  cGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTgg                                                                                                                                                                                                                                              >  2:1191852/1‑175 (MQ=255)
                                                                                                                                                  cGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAAt                                                                                                                            >  1:240613/1‑289 (MQ=255)
                                                                                                                                                  cGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCAGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACCGGTTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCAAGCATTCGCTTCTTCATAACTTTGAATAACGCTGGAGAGCCAATCCGGCGAGTATTAATACGCGCCAAACAACAGGACTCTATTACCAAt                                                                                                                            >  2:1305389/1‑289 (MQ=255)
                                                                                                                                                      aaGGGAGGTAAGGAGGAGTAACAAACTGAAGGGCTCGACAGAATGCCGCGCCGGACGGGCGAAGACACTGGCGTTAACCCCACCATACGTGCAGTCAGCCACGGCTTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAAGCCGCCTCAATACTGAATGAACGCGTAATGGTGTAACGCGCGACGGCAGTCGCTTCTTCAGAACGTTGAATACCGCTGGAGAGCGAATCCGGAGAGTGGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTc                                                                                                                        <  2:1606131/289‑1 (MQ=255)
                                                                                                                                                      aaGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTc                                                                                                                        <  2:350325/289‑1 (MQ=255)
                                                                                                                                                       aGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGATGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                    >  2:250153/1‑244 (MQ=255)
                                                                                                                                                       aGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                    >  1:1618761/1‑244 (MQ=255)
                                                                                                                                                       aGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                    <  1:206753/244‑1 (MQ=255)
                                                                                                                                                       aGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                    <  1:250153/244‑1 (MQ=255)
                                                                                                                                                       aGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                    >  2:206753/1‑244 (MQ=255)
                                                                                                                                                       aGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTcc                                                                                                                       >  1:333194/1‑289 (MQ=255)
                                                                                                                                                       aGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTcc                                                                                                                       >  1:1011586/1‑289 (MQ=255)
                                                                                                                                                       aGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTc                                                                                                                        >  2:964249/1‑288 (MQ=255)
                                                                                                                                                       aGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGGAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTcc                                                                                                                       >  1:866387/1‑289 (MQ=255)
                                                                                                                                                       aGGGAGATAAGGCGTAGTAAGAAACGGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACGGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGagagcgaatccg                                                                                                                                                                       <  2:2191479/241‑9 (MQ=255)
                                                                                                                                                                   cGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGACAATTTTCCTCTGCAAacaa                                                                                                            >  1:1819289/1‑286 (MQ=255)
                                                                                                                                                                     tagtaAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTgg                                                                                                                                                                                                                                              >  1:2215166/1‑156 (MQ=255)
                                                                                                                                                                     tagtaAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTgg                                                                                                                                                                                                                                              <  1:512321/156‑1 (MQ=255)
                                                                                                                                                                     tagtaAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTgg                                                                                                                                                                                                                                              <  2:2215166/156‑1 (MQ=255)
                                                                                                                                                                     tagtaAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGtt                                                                                                                                  >  2:1091738/1‑264 (MQ=255)
                                                                                                                                                                      agtaAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCa                                                                                                                      >  1:1521018/1‑275 (MQ=255)
                                                                                                                                                                       gtaAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCa                                                                                                                      <  2:2113668/274‑1 (MQ=255)
                                                                                                                                                                        taAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGTATCAGAATCTGCCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAAGCCGGAGAGTAGTAATATTCGCCAAACAACCGGAAGCTGTTGc                                                                                                                                <  1:1119026/263‑1 (MQ=255)
                                                                                                                                                                              aCTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCt                                                                                                <  1:1567916/289‑1 (MQ=255)
                                                                                                                                                                                tGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGaa                                                                                                                                                                                            <  1:941382/195‑1 (MQ=255)
                                                                                                                                                                                tGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGaa                                                                                                                                                                                            >  2:941382/1‑195 (MQ=255)
                                                                                                                                                                                tGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGagagcgaatccg                                                                                                                                                                       <  2:710282/216‑9 (MQ=255)
                                                                                                                                                                                tGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGagagcgaatccg                                                                                                                                                                       >  1:710282/1‑208 (MQ=255)
                                                                                                                                                                                  aaTGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCg                                                                                             >  1:2175017/1‑288 (MQ=255)
                                                                                                                                                                                          gACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGagag                                                                                                                                                                               <  1:1895544/198‑1 (MQ=255)
                                                                                                                                                                                          gACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGagag                                                                                                                                                                               >  2:1895544/1‑198 (MQ=255)
                                                                                                                                                                                                 tGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                    <  1:685843/202‑1 (MQ=255)
                                                                                                                                                                                                    gccgcCGGAAGGGTGCAGAACCTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCg                                                                           <  2:1981109/286‑1 (MQ=255)
                                                                                                                                                                                                    cgcgCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAacca                                                                                                            <  1:1063358/255‑1 (MQ=255)
                                                                                                                                                                                                    cgcgCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAacca                                                                                                            >  2:1063358/1‑255 (MQ=255)
                                                                                                                                                                                                      cgcCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAac                                                                                                              >  2:1396015/1‑251 (MQ=255)
                                                                                                                                                                                                      cgcCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTaa                                                                        >  1:825282/1‑289 (MQ=255)
                                                                                                                                                                                                       gcCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAAt                                                                       <  2:825282/289‑1 (MQ=255)
                                                                                                                                                                                                                gATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGtt                                                                <  1:781508/287‑1 (MQ=255)
                                                                                                                                                                                                                 aTCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCCCCTACCGCCGCGGCATAACCTTCATCGCCGTAATTCGGGtt                                                                >  1:1269938/1‑286 (MQ=255)
                                                                                                                                                                                                                   cAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGagagcgaatccg                                                                                                                                                                       <  1:1449111/181‑9 (MQ=255)
                                                                                                                                                                                                                          tGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCACCGCCGTAATTCGTGTGGGTGTAAACGc                                                     >  2:1757426/1‑288 (MQ=255)
                                                                                                                                                                                                                                    cccAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTaaa                                                        >  1:1976614/1‑275 (MQ=255)
                                                                                                                                                                                                                                       aaCATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACg                                       >  1:1633871/1‑289 (MQ=255)
                                                                                                                                                                                                                                       aaCATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTACAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACg                                       <  1:964249/289‑1 (MQ=255)
                                                                                                                                                                                                                                                gCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTg                                                               <  1:303384/256‑1 (MQ=255)
                                                                                                                                                                                                                                                gCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTg                                                               >  2:303384/1‑256 (MQ=255)
                                                                                                                                                                                                                                                  cGTCAGCAACGTAGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGTCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTaa                            <  2:1534435/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            ggCGTTGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCgcta                  >  1:98694/1‑286 (MQ=255)
                                                                                                                                                                                                                                                               gTTGTCGCGG‑TACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCGAGAGGc               <  1:2001439/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                ttGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCga                    >  1:1735403/1‑283 (MQ=255)
                                                                                                                                                                                                                                                                ttGTCGCGGTTACCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCga                    <  2:1735403/283‑1 (MQ=255)
                                                                                                                                                                                                                                                                    cgcgGTTACCGTCTTTACCCGACAGATTCAGGTATCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCGAGAGGCAGAtt          <  2:132708/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           aCCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCGAGAGGCAGATTCAAcccc   <  1:1409819/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           aCCGTCTTTACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCGAGAGGCAGATTCAAccc    >  2:1247633/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                   
TAATGGCAACCCCTGATGAAAGAAAAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTTACCGCTCAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGGCTATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCGAGAGGCAGATTCAACCCCA  >  CP042583/1934782‑1935338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A