Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,935,061 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,935,0610GC99.5% 460.8 / NA 199intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (93/104);  total (94/105)
Fisher's exact test for biased strand distribution p-value = 4.75e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,935,0620CG99.0% 454.5 / NA 199intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base G (92/105);  total (94/105)
Fisher's exact test for biased strand distribution p-value = 2.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,935,0630TA99.5% 462.6 / NA 199intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (92/105);  minor base C (1/0);  total (94/105)
Fisher's exact test for biased strand distribution p-value = 4.70e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 199 total aligned reads displayed.

TGGCAACCCCTGATGAAAGAAAAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCGCTCAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGGCTATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCGAGAGGCAGATTCAACCCCAGCCC  >  CP042583/1934785‑1935342
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                       
tGGCAACCCCTGATGAAAGAAAAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAgg                                                                                                                                                                                                                                                                               >  2:766949/1‑289 (MQ=255)
aggCAACCCATGATGAAAGAAAAAATCAGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAAGGCCGCGGCGGAAGGGATCAGAATCTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATGCAgg                                                                                                                                                                                                                                                                               <  2:1245107/288‑1 (MQ=255)
     aCCCCTGATGAAAGAAAAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCg                                                                                                                                                                                                                                                                          >  1:986568/1‑289 (MQ=255)
     aCCCCTGATGAAAGAAAAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCg                                                                                                                                                                                                                                                                          >  2:1512400/1‑289 (MQ=255)
      ccccTGATGAAAGAAAAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGGCAGCAACGGCGTTGTCGCGGTTACCGGCCTT‑ACCCGACAGATTCAGGTAGCGa                                                                                                                                                                                                                                                                         >  2:1637174/1‑289 (MQ=255)
         cTGATGAAAGAAAAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATa                                                                                                                                                                                                                                                                       >  2:1259051/1‑288 (MQ=255)
           gatgaAAGAAAAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAAcc                                                                                                                                                                                                                                                                    <  2:282900/289‑1 (MQ=255)
             gagaaaaaaaaaCCGGCAAGCCAGGCTACGTTAGTTTCAGCGATTTGCCCGTGTAACACTGCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAAcc                                                                                                                                                                                                                                                                    <  2:1891/281‑1 (MQ=255)
                aagaaaAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGcc                                                                                                                                                                                                                                                                <  1:1194898/288‑1 (MQ=255)
                 agaaaAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTc                                                                                                                                                                                                                                                              >  1:877688/1‑289 (MQ=255)
                           ggCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATactgact                                                                                                                                                                                                                                                    <  1:1285509/289‑1 (MQ=255)
                             ccacgcagGCGGCGTTAGTGTAAACGATTTGCCCGTGTAACACTTCAGCCCCGGTGGATAACATTTCCACTTTAAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGACGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTgg                                                                                                                                                                                                                                                  <  2:1215827/284‑1 (MQ=255)
                              cagccagGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTgg                                                                                                                                                                                                                                                  <  1:333320/288‑1 (MQ=255)
                                  cagGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACTCTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATACCGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCa                                                                                                                                                                                                                                             <  1:1576542/289‑1 (MQ=255)
                                  aagGCAGCGTTAGTGTCACGGATTTGCCCGTGTAACACTTAATCCCCGGTGATTAAAATTTCCACTTTTAACATGGTTATCGCCTGCTTTGGTTATCGAATAACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAACCTGAATGGCGCGACAGAAGGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCGCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCa                                                                                                                                                                                                                                             <  2:2430/288‑1 (MQ=255)
                                           ttAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATactgact                                                                                                                                                                                                                                                    >  1:210820/1‑273 (MQ=255)
                                              gtgtCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAAcc                                                                                                                                                                                                                                                                    <  2:1808752/254‑1 (MQ=255)
                                              gtgtCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAAcc                                                                                                                                                                                                                                                                    >  1:1808752/1‑254 (MQ=255)
                                              gtgtCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGGTAACCCCAACATACGGGCCGTCAGCCACGGCGTTTTCGCGGTTACCGTCTTT‑ACCCCCCCAATTCAAGTAGACATAACCAGTCCCCTAACTGAATGGACGCATAAGGgttgaag                                                                                                                                                                                                                                 >  2:1948976/1‑284 (MQ=255)
                                               tgtCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGcc                                                                                                                                                                                                                                                                >  2:1070996/1‑257 (MQ=255)
                                                  cAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAAcgcgc                                                                                                                                                                                                                             <  1:1126417/289‑1 (MQ=255)
                                                   aaCGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGCATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTTTCGCGGTTACCGTCTTTAACCGC‑CAGATCCAGGTAGCGATAACCCGCCTCAATCCTGACTGAATGCCTACTGGTTGAAcggac                                                                                                                                                                                                                             >  2:787531/1‑285 (MQ=255)
                                                                  tAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACCCCTAATGGGTTAACgcccgcacgcctccccttct                                                                                                                                                                                                             >  2:1183769/1‑275 (MQ=255)
                                                                     cacTTCACCCCCGTTGATTAACATTTCCACCTTTAACAGGGTTATCTCCTGCTTTTGTTATCGAAGCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCa                                                                                                                                                                                                          <  2:1360133/289‑1 (MQ=255)
                                                                          cATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGACACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACGGACTGGACGCATAATGGCGTAACGCGCGCCAGCATTCGCTTCTTCATAACt                                                                                                                                                                                                     >  2:1142518/1‑289 (MQ=255)
                                                                          cATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCCCCCCAGTCTTCGCTTCTTCATAACt                                                                                                                                                                                                     >  2:619952/1‑289 (MQ=255)
                                                                          cATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCATGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑AACCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACt                                                                                                                                                                                                     >  1:1712412/1‑289 (MQ=255)
                                                                          cATCCCCGGTGGATAACATTTCCACCTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACt                                                                                                                                                                                                     >  1:1360133/1‑289 (MQ=255)
                                                                               ccGGTGGATAACATTTTCCCTTTTCACATGGTTATCTCCTGTTTTTGTTATCGAATCACTATACCGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGaa                                                                                                                                                                                                <  2:1407992/289‑1 (MQ=255)
                                                                                 ggTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCAGTATAACGCAAAGGGAGATAAGGAGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATa                                                                                                                                                                                              <  1:1932061/289‑1 (MQ=255)
                                                                                 ggTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATa                                                                                                                                                                                              <  1:1745014/289‑1 (MQ=255)
                                                                                  gTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATaa                                                                                                                                                                                                                                                                      >  2:850372/1‑216 (MQ=255)
                                                                                  gTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATa                                                                                                                                                                                              >  1:695073/1‑288 (MQ=255)
                                                                                  gTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGACCGCCAGCATTCGCCTCCTCATAACTTTGAATa                                                                                                                                                                                              >  2:1831500/1‑288 (MQ=255)
                                                                                             ttCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATACGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGTGGTTACCGTATTT‑ACCCGACCGATTCAGGTAGCGATAACCCGCCTCCATACAGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTACTAAATTTGAATACAGCTGGagagc                                                                                                                                                                                  >  2:650970/1‑288 (MQ=255)
                                                                                               ccACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCACAATACTGACTgg                                                                                                                                                                                                                                                  >  1:510917/1‑223 (MQ=255)
                                                                                                    tttAACATGGTTATCTCCTGCTTTTGTTTTCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGACGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGagagcgaatccg                                                                                                                                                                           <  1:1032313/289‑9 (MQ=255)
                                                                                                    tttAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGagagcgaatccg                                                                                                                                                                           <  2:68440/289‑9 (MQ=255)
                                                                                                    tttAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGagagcgaatccg                                                                                                                                                                           <  1:281114/289‑9 (MQ=255)
                                                                                                       aaCTTGGTTTTCTCCTGCTTTTGTTATCGAATAACTATAACGCAAAGGGGGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                        <  2:695073/289‑1 (MQ=255)
                                                                                                       aaCATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                        <  1:1512400/289‑1 (MQ=255)
                                                                                                       aaCATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                        <  1:252333/289‑1 (MQ=255)
                                                                                                       aaCATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                        <  1:1831500/289‑1 (MQ=255)
                                                                                                                       gCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                        <  1:11363/273‑1 (MQ=255)
                                                                                                                           ttGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATGAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTATTT‑ACCCGAAAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGGGCGCCAGCATACGCTTCTTCATAACTTAGAATACCGCTGGAGAGCGAATCCGGAGAGTAGCAATTCTCGAcaaac                                                                                                                                                    >  1:911168/1‑289 (MQ=255)
                                                                                                                             gTTATCGAATCACTATAACGCAAAGGGAGATGAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCcaaacaa                                                                                                                                                  >  1:417881/1‑289 (MQ=255)
                                                                                                                                     aTCACTATAACGCAAAGGGAGATAAGGCGTATTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAg                                                                                                                                           <  1:1047701/288‑1 (MQ=255)
                                                                                                                                         cTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGtt                                                                                                                                      <  1:764969/289‑1 (MQ=255)
                                                                                                                                               cGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAAt                                                                                                                                >  1:1399558/1‑289 (MQ=255)
                                                                                                                                                    aGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAAcgcg                                                                                                                                                                                                                              <  2:1296872/190‑1 (MQ=255)
                                                                                                                                                    aGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCCCAATACTGCCTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTATTCATAACTTTTAATACCACTGGAGACGGAATCCGGACCGCAGTAATAATCGCCAAACAACCCGCAACTGTGCCCAATTTTc                                                                                                                            >  2:440745/1‑288 (MQ=255)
                                                                                                                                                      ggAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGagagcgaatccg                                                                                                                                                                           <  1:439476/239‑9 (MQ=255)
                                                                                                                                                         gaTAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGCTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGctt                                                                                                                                                                                                               >  2:495790/1‑200 (MQ=255)
                                                                                                                                                             aGGCGTAGTAAGAAACTGAAGGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAac                                                                                                                  <  1:1790317/289‑1 (MQ=255)
                                                                                                                                                                cGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGTCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                        >  1:1664730/1‑232 (MQ=255)
                                                                                                                                                                cGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                        <  2:480199/232‑1 (MQ=255)
                                                                                                                                                                cGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                        >  1:480199/1‑232 (MQ=255)
                                                                                                                                                                cGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAacca                                                                                                                >  1:1646899/1‑288 (MQ=255)
                                                                                                                                                                cGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAacca                                                                                                                >  2:1687419/1‑288 (MQ=255)
                                                                                                                                                                cGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAacca                                                                                                                <  2:1133373/288‑1 (MQ=255)
                                                                                                                                                                  tagtaAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCaaa                                                                                                                   >  2:1153575/1‑283 (MQ=255)
                                                                                                                                                                  tagtaAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAAAGGAAGCTGTTGCCAATTTTCCACTGCAAaccacc                                                                                                              >  1:639906/1‑288 (MQ=255)
                                                                                                                                                                           acggAAGGGCGCGACAGAATGCCGCGCCGGAAGGGATGTGAAACTGGCGTTAACCCCAACATACGGGCCGGCAGCCACGGCGTTAGCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCt                                                                                                    <  2:1480948/286‑1 (MQ=255)
                                                                                                                                                                            cTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTg                                                                                                   <  1:1183769/289‑1 (MQ=255)
                                                                                                                                                                                    cgcgACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTg                                                                                                   <  2:22554/281‑1 (MQ=255)
                                                                                                                                                                                      cgACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATaa                                                                                           >  2:1452959/1‑287 (MQ=255)
                                                                                                                                                                                         cAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCGGGTGCCAATTTTCCACTGCAAACCACCTCCTACCCCTGCGGCATAAccgt                                                                                       >  2:553022/1‑286 (MQ=255)
                                                                                                                                                                                                cccggcCGGAAGGGATCAGAAACGGTCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGc                                                                                 <  1:772518/283‑1 (MQ=255)
                                                                                                                                                                                                 cgcgCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCt                                                                                                                                                                                                                                                               >  2:1648867/1‑112 (MQ=255)
                                                                                                                                                                                                 cgcgCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCTTAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCCCTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCg                                                                               <  2:374808/288‑1 (MQ=255)
                                                                                                                                                                                                   cgcCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTaa                                                                            >  1:1259068/1‑289 (MQ=255)
                                                                                                                                                                                                   cgcCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTaa                                                                            >  1:685375/1‑289 (MQ=255)
                                                                                                                                                                                                   ccccGGAAGGGATCAGAAACTGGCGTTAACCCCAACCTACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCAAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGACTCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTATCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGTCGTaa                                                                            >  1:1615773/3‑289 (MQ=255)
                                                                                                                                                                                                             gATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGtt                                                                    <  1:1164006/287‑1 (MQ=255)
                                                                                                                                                                                                                cAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCAcct                                                                                                             <  1:846747/243‑1 (MQ=255)
                                                                                                                                                                                                                   aaaCTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTaa                                                             >  1:232495/1‑288 (MQ=255)
                                                                                                                                                                                                                        ggCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGGAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCt                                                       >  1:1972358/1‑289 (MQ=255)
                                                                                                                                                                                                                          cGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCttt                                                     >  1:1407160/1‑289 (MQ=255)
                                                                                                                                                                                                                           gTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCttt                                                     >  1:1867600/1‑288 (MQ=255)
                                                                                                                                                                                                                                         aCGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAACCGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCCCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACCACCTTTCCGCCAACGGTcc                                       >  2:916475/1‑287 (MQ=255)
                                                                                                                                                                                                                                           gggCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCa                                    >  1:1357531/1‑289 (MQ=255)
                                                                                                                                                                                                                                           gggCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCa                                    >  1:1150688/1‑289 (MQ=255)
                                                                                                                                                                                                                                             gCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                        <  2:86716/155‑1 (MQ=255)
                                                                                                                                                                                                                                             gCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGgag                                                                                                                                                                        >  1:86716/1‑155 (MQ=255)
                                                                                                                                                                                                                                             gCCGTCAGCCACGGCGTTGTCGAGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGGTGCCAATTTTCCACTGCAAACCACCTCATACCGCTGCGGCATAACATTCATCGCCGTAATTCGGGTTGTTGTACACGCCTTTTCCGCCAACGGTCGCCAtt                                  >  1:1066577/1‑289 (MQ=255)
                                                                                                                                                                                                                                              ccGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTa                                 >  2:1738653/1‑289 (MQ=255)
                                                                                                                                                                                                                                                gTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTGACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAAc                               >  2:304364/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 tCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAacca                                                                                                                <  1:1442320/207‑1 (MQ=255)
                                                                                                                                                                                                                                                 tCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAacca                                                                                                                >  2:1442320/1‑207 (MQ=255)
                                                                                                                                                                                                                                                 tCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTCAACGCCTTTTCCGCCAACGGTCGCCATTAACg                              >  2:267039/1‑289 (MQ=255)
                                                                                                                                                                                                                                                   aGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCAt                                                                                    >  1:660790/1‑233 (MQ=255)
                                                                                                                                                                                                                                                            gTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGGGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCGAGAgg                    <  2:1572921/288‑1 (MQ=255)
                                                                                                                                                                                                                                                            gTTGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCGAGAGGc                   <  1:1310672/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             ttGTCACGGTTAGCGTCTTT‑ACCAGACAGATGCGGGTGTCCAGAGCCCGCCTCATTACTAGCTGGACGCATAATGGTGTAACGCGCGCAAGCATTCGCTTCTTCAGAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGTTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCGAGAGGCa                  <  2:419552/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             ttGGCGCGGTTCCCGGCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGACTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCGAGAGGc                   <  2:1867600/288‑1 (MQ=255)
                                                                                                                                                                                                                                                              tGTCGCGGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTGACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCGAGAGGCa                  <  1:304364/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                   cgGTTACCGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCGAGAGGCAGATTc             <  2:72299/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                          cGTCTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCg                                                                                                 <  2:1328053/197‑1 (MQ=255)
                                                                                                                                                                                                                                                                             cTTT‑ACCCGACAGATTCAGGTCCCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACGTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAGCGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCGAGAGGCAGATTCAACCCCAGccc  <  2:1015950/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             cTTT‑ACCCGACAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGCGAATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCGAGAGGCAGATTCAACCCCAGccc  <  1:1544876/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                       
TGGCAACCCCTGATGAAAGAAAAAATCGGCCAGCCAGGCAGCGTTAGTGTCAACGATTTGCCCGTGTAACACTTCATCCCCGGTGGATAACATTTCCACTTTTAACATGGTTATCTCCTGCTTTTGTTATCGAATCACTATAACGCAAAGGGAGATAAGGCGTAGTAAGAAACTGAATGGCGCGACAGAATGCCGCGCCGGAAGGGATCAGAAACTGGCGTTAACCCCAACATACGGGCCGTCAGCCACGGCGTTGTCGCGGTTACCGTCTTT‑ACCGCTCAGATTCAGGTAGCGATAACCCGCCTCAATACTGACTGGACGCATAATGGTGTAACGCGCGCCAGCATTCGCTTCTTCATAACTTTGAATACCGCTGGAGAGGCTATCCGGAGAGTAGTAATACTCGCCAAACAAACGGAAGCTGTTGCCAATTTTCCACTGCAAACCACCTCCTACCGCTGCGGCATAACCTTCATCGCCGTAATTCGGGTTGGTGTAAACGCCTTTTCCGCCAACGGTCGCCATTAACGGCCCGAGAGGCAGATTCAACCCCAGCCC  >  CP042583/1934785‑1935342

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A