Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,935,918 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,935,9180AT99.1% 515.5 / ‑5.9 221intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base T (137/81);  total (139/82)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.65e-01
*CP0425831,935,9190GC100.0% 525.6 / NA 221intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (139/82);  total (139/82)
*CP0425831,935,9200CG99.6% 529.1 / NA 221intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (138/82);  total (139/82)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 221 total aligned reads displayed.

TAACTAAATACTTCTTAAATAATTAAATGCCGAAAAAATAAACACACTTTATCGATACACACAAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTAGCGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATT  >  CP042583/1935641‑1936191
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                 
              ttAAATAATTAAATGCCGAAAAAATAAACACACTTTATCGATACACACAAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGcga                                                                                                                                                                                                                                                           <  2:1042786/289‑1 (MQ=255)
                     atTAAATGCCGAAAAAATAAACACACTTTATCGATACACACAAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAAtt                                                                                                                                                                                                                                                    >  2:2202087/1‑289 (MQ=255)
                                aaaaaaTAAACACACTTTATCGATACACACAAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTTTTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACt                                                                                                                                                                                                                                         >  1:52972/1‑289 (MQ=255)
                                                ttATCGATACACACAAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGAATACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTcgc                                                                                                                                                                                                                         >  2:190796/1‑289 (MQ=255)
                                                 tATCGATACACACAAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTcgcg                                                                                                                                                                                                                        <  2:1570331/289‑1 (MQ=255)
                                                  aTCGATACACACAAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCg‑a                                                                                                                                                                                                                      <  2:1508636/289‑1 (MQ=255)
                                                       tACACACAAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCg‑aaga                                                                                                                                                                                                                   >  1:773906/1‑287 (MQ=255)
                                                             caAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGGGGAGCCTGGCGAACGAATTGAAGAGGCAATAAGCGTCGATATTCGCG‑AAGAACTGGgag                                                                                                                                                                                                           >  1:2158509/1‑289 (MQ=255)
                                                                      taataaGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGTTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGaaa                                                                                                                                                                                                                              >  1:2123229/1‑262 (MQ=255)
                                                                      taataaGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGaaa                                                                                                                                                                                                                              <  2:2123229/262‑1 (MQ=255)
                                                                      taataaGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTGCCCCGGTCATTGGGGGATT‑CCGGTTGCGGGCGTGGGCCTTGGCAACGGATTTGAAG‑GGGACTACGGCCCGGAATTTCCGCAGGAACTGGGAGAAAAggtgc                                                                                                                                                                                                  >  2:1283306/1‑289 (MQ=255)
                                                                        ataaGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTggc                                                                                                                                                                                                                                                                             <  1:1336627/214‑1 (MQ=255)
                                                                            gTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTg                                                                                                                                                                                             >  2:742666/1‑288 (MQ=255)
                                                                              aCAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACa                                                                                                                                                                                          >  1:1604454/1‑289 (MQ=255)
                                                                                aGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGa                                                                                                                                                                                        >  2:164771/1‑289 (MQ=255)
                                                                                  ttATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGcga                                                                                                                                                                                                                                                           <  1:389718/221‑1 (MQ=255)
                                                                                    atcatcGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGa                                                                                                                                                                                                                                                  >  2:1074748/1‑228 (MQ=255)
                                                                                    atcatcGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATc                                                                                                                                                                                    >  1:627644/1‑289 (MQ=255)
                                                                                    atcatcGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATc                                                                                                                                                                                    >  1:1655781/1‑289 (MQ=255)
                                                                                       atcGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTCTCTTTTTATTTATAAGGAATATCACTGTGCGCCAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCACGTTCGGGTGGC‑TGCGTGGAGCCTGGCGAACGAATTAAAGATGACCTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACTGCGTATGTTTACAGAAATCaa                                                                                                                                                                                  >  2:1989224/1‑287 (MQ=255)
                                                                                         cGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCttt                                                                                                                                                                                               >  1:313710/1‑273 (MQ=255)
                                                                                          gCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAag                                                                                                                                                                                                                                                >  2:1136224/1‑224 (MQ=255)
                                                                                          gCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAag                                                                                                                                                                                                                                                <  1:1136224/224‑1 (MQ=255)
                                                                                            aaaaGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGTACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCTCGAAATTCGCG‑CAGAACGGGGAGAACAGCTGCTGTTGACAGAAATCACGCCGTg                                                                                                                                                                            >  2:1146424/1‑289 (MQ=255)
                                                                                            aaaaGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTg                                                                                                                                                                            >  1:1770768/1‑289 (MQ=255)
                                                                                            aaaaGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTg                                                                                                                                                                            >  1:739824/1‑289 (MQ=255)
                                                                                                   aTTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTc                                                                                                                                                                     >  2:2249787/1‑289 (MQ=255)
                                                                                                          tCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCg‑a                                                                                                                                                                                                                      >  1:1903365/1‑233 (MQ=255)
                                                                                                          tCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCgatg                                                                                                                                                              >  1:299022/1‑289 (MQ=255)
                                                                                                           cACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCAGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCgatgc                                                                                                                                                             >  2:1724388/1‑288 (MQ=255)
                                                                                                            aCTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCgatgat                                                                                                                                                            >  1:911509/1‑289 (MQ=255)
                                                                                                             cTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGAc                                                                                                                                                                                           >  2:2029791/1‑257 (MQ=255)
                                                                                                                   caTATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCTGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGc                                                                                                                                                      >  2:1254562/1‑288 (MQ=255)
                                                                                                                     tatTTGTTAGTTACCTTTTTTTCATGTTTTCTTTTTATTTATAAGGAATATCACTTTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCAcc                                                                                                                                                   <  2:911509/289‑1 (MQ=255)
                                                                                                                     tatTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCAcc                                                                                                                                                   <  1:992367/289‑1 (MQ=255)
                                                                                                                       tttGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCaa                                                                                                                                                 <  1:802710/289‑1 (MQ=255)
                                                                                                                        ttGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACTATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTATGCCGCGAAATTCGCG‑AAGAACTGGGAGAACGGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCCATGTTATTCGCACCAAg                                                                                                                                                >  2:1403710/1‑289 (MQ=255)
                                                                                                                           tgAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGACGTGGACCGTCAGCGACGATATCAGACCCAAGAct                                                                                                                                             >  2:725293/1‑288 (MQ=255)
                                                                                                                                tACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGc                                                                                                                                        >  1:656811/1‑289 (MQ=255)
                                                                                                                                 aCCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGa                                                                                                                                               >  2:1441016/1‑281 (MQ=255)
                                                                                                                                 aCCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGa                                                                                                                                               <  1:1441016/281‑1 (MQ=255)
                                                                                                                                   cGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCTGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGa                                                                                                                                     <  1:1254562/289‑1 (MQ=255)
                                                                                                                                            aTGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGTGGGTCGaaa                                                                                                                            >  2:667718/1‑289 (MQ=255)
                                                                                                                                               gTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGa                                                                                                                         >  1:19742/1‑289 (MQ=255)
                                                                                                                                                 ttCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGaa                                                                                                                        <  1:2249787/288‑1 (MQ=255)
                                                                                                                                                    tttttATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGTAAgcga                                                                                                                    >  1:1100394/1‑289 (MQ=255)
                                                                                                                                                    tttttATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGAAGTATGACGATGGACGCAGGGAAgaga                                                                                                                    >  2:185289/1‑289 (MQ=255)
                                                                                                                                                                        cccTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCa                                                                                                                                                                                   >  2:1673045/1‑206 (MQ=255)
                                                                                                                                                                            gtgCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGAtttttt                                                                                            >  1:2180510/1‑288 (MQ=255)
                                                                                                                                                                            gtgCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTg                                                                                            >  1:482575/1‑289 (MQ=255)
                                                                                                                                                                            gtgCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTACTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACACCGGGAAATTAGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGACGTGGACCTTCAGCGTTGATATTTGAACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATGTTTg                                                                                            >  1:2022415/1‑289 (MQ=255)
                                                                                                                                                                             tgCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTg                                                                                            >  1:406857/1‑288 (MQ=255)
                                                                                                                                                                             tgCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGa                                                                                           >  2:1943179/1‑289 (MQ=255)
                                                                                                                                                                               cGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCtt                                                                                                                                                                      >  1:130593/1‑212 (MQ=255)
                                                                                                                                                                               cGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCtt                                                                                                                                                                      <  2:130593/212‑1 (MQ=255)
                                                                                                                                                                                     cGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGttt                                                                                   >  1:892908/1‑289 (MQ=255)
                                                                                                                                                                                       gACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCAcc                                                                                                                                                   <  2:585101/223‑1 (MQ=255)
                                                                                                                                                                                       gACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGtt                                                                                    >  2:1941151/1‑286 (MQ=255)
                                                                                                                                                                                            ttGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCg                                                                                                                                                                 >  1:1853617/1‑204 (MQ=255)
                                                                                                                                                                                            ttGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGAt                                                                                                                                    <  1:1215591/233‑1 (MQ=255)
                                                                                                                                                                                                aTGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTc                                                                                                                                                                     <  1:1029579/196‑1 (MQ=255)
                                                                                                                                                                                                 tGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTcgc                                                                                                                                                                                                                         >  2:790730/1‑144 (MQ=255)
                                                                                                                                                                                                 tGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGCAGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCTTTTCTGCCACCCgaa                                                                       >  2:2228800/1‑288 (MQ=255)
                                                                                                                                                                                                 tGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCgag                                                                       >  1:1054098/1‑289 (MQ=255)
                                                                                                                                                                                                  gCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTATCTGATTTTTGACTGCGTTTCTGCCAACTgaga                                                                      >  2:1865415/1‑289 (MQ=255)
                                                                                                                                                                                                      tttGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTg                                                                                                                                                                            <  2:2180679/183‑1 (MQ=255)
                                                                                                                                                                                                      tttGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGaa                                                                                                                        >  1:2218198/1‑235 (MQ=255)
                                                                                                                                                                                                      tttGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGAGTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGACAAGTg                                                                  >  2:345638/1‑289 (MQ=255)
                                                                                                                                                                                                      tttGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCAGTGGACCTTCAGCGATGATATTCGCACAAAGACGTAAGCAGATGGGAGCAAgg                                                                                                                          >  2:1215591/1‑233 (MQ=255)
                                                                                                                                                                                                                   gatgGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAag                                                     <  1:1943179/289‑1 (MQ=255)
                                                                                                                                                                                                                     tgGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAagag                                                   >  2:2210752/1‑289 (MQ=255)
                                                                                                                                                                                                                     tgGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAaga                                                    <  1:1933712/288‑1 (MQ=255)
                                                                                                                                                                                                                         gCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGttt                                                <  1:961681/288‑1 (MQ=255)
                                                                                                                                                                                                                         gCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTc                                               <  1:2202087/289‑1 (MQ=255)
                                                                                                                                                                                                                          cTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCa                                              >  2:138711/1‑289 (MQ=255)
                                                                                                                                                                                                                           ttATTTGCTGGGTAAAATGGCGGACGTGCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGa                                                       <  2:2153497/279‑1 (MQ=255)
                                                                                                                                                                                                                                  cTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTAc                                       >  1:1556221/1‑288 (MQ=255)
                                                                                                                                                                                                                                    gtgtAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAg                                                                                                                                                                                         >  2:820319/1‑140 (MQ=255)
                                                                                                                                                                                                                                    gtgtAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAag                                                     <  2:1080430/272‑1 (MQ=255)
                                                                                                                                                                                                                                    gtgtAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAag                                                     >  1:1080430/1‑272 (MQ=255)
                                                                                                                                                                                                                                    gtgtAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTAcgcg                                    >  1:1269842/1‑289 (MQ=255)
                                                                                                                                                                                                                                     tgtAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGt                                   >  2:461498/1‑289 (MQ=255)
                                                                                                                                                                                                                                     tgtAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGt                                   >  1:1469803/1‑289 (MQ=255)
                                                                                                                                                                                                                                     tgtAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGt                                   >  1:1682008/1‑289 (MQ=255)
                                                                                                                                                                                                                                           aTGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGTGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTaa                             <  1:138711/289‑1 (MQ=255)
                                                                                                                                                                                                                                              cgcgaatttCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTaaaa                           >  2:955628/9‑288 (MQ=255)
                                                                                                                                                                                                                                               ccGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCaa                                                                                                                                                 <  1:1162829/169‑1 (MQ=255)
                                                                                                                                                                                                                                               ccGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAAc                          >  2:1472244/1‑288 (MQ=255)
                                                                                                                                                                                                                                               ccGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGATaaa                            <  2:392320/286‑1 (MQ=255)
                                                                                                                                                                                                                                               ccGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTAAGGACTACGCGTGGGTaaaa                           >  1:1552122/1‑287 (MQ=255)
                                                                                                                                                                                                                                                 gacgaTCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGACAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTg                       >  2:640584/1‑289 (MQ=255)
                                                                                                                                                                                                                                                   ctgtCGGGGCGGTTTCCCCGGTCAAGGGGGTGTTTCGGGTGGG‑GGCGTGGAGCCGGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGa                      <  2:1553662/285‑1 (MQ=255)
                                                                                                                                                                                                                                                            cgTTTTCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGt             <  1:444830/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                 tCCCCGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTa       <  1:1840529/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  ccccGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAag                                                     >  2:1119481/1‑242 (MQ=255)
                                                                                                                                                                                                                                                                     cGGTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGAt   <  1:104888/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      ggTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGAtt  >  2:414266/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      ggTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGAtt  >  1:1517278/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       gTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGt                               <  2:37944/259‑1 (MQ=255)
                                                                                                                                                                                                                                                                       gTCAATGGGCGATTTCGGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGt                               >  1:37944/1‑259 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                 
TAACTAAATACTTCTTAAATAATTAAATGCCGAAAAAATAAACACACTTTATCGATACACACAAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTAGCGGTGGC‑GGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCG‑AAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATT  >  CP042583/1935641‑1936191

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A