Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,935,918 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,935,9180AT100.0% 495.3 / NA 207intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (133/74);  total (133/74)
*CP0425831,935,9190GC99.5% 483.2 / NA 207intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (131/74);  minor base T (1/0);  total (133/74)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,935,9200CG100.0% 497.1 / NA 207intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (133/74);  total (133/74)

Only 100 of 207 total aligned reads displayed.

TAACTAAATACTTCTTAAATAATTAAATGCCGAAAAAATAAACACACTTTATCGATACACACAAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTAGCGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATG  >  CP042583/1935641‑1936197
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                     
tAACTAAATACTTCTTAAATAATTAAATGCCGAAAAAATAAACACACTTTATCGATACACACAAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCTCTTTGATTCAAAATGATTGTGCTTATTTGCTGTGTAATATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTggctgc                                                                                                                                                                                                                                                                              >  1:1909086/1‑289 (MQ=255)
                    aatTAAATGCCGAAAAAATAAACACACTTTATCGATACACACAAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAAt                                                                                                                                                                                                                                                          <  2:878057/289‑1 (MQ=255)
                     atTAAATGCCGAAAAAATGAACACACTTTATCGATACACACAAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAAtt                                                                                                                                                                                                                                                         >  1:670647/1‑289 (MQ=255)
                     atTAAATGCCGAAAAAATAAACACACTTTATCGATACACACAAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAAtt                                                                                                                                                                                                                                                         >  2:478425/1‑289 (MQ=255)
                                                      aTACACACAAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTTTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGTAGAGGCACTACGCCGCGAAACTCGCgaagaa                                                                                                                                                                                                                        >  2:45587/1‑289 (MQ=255)
                                                       tACACACAAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCTAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGCACAAc                                                                                                                                                                                                                       >  2:1029844/1‑289 (MQ=255)
                                                         cacacaAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTg                                                                                                                                                                                                                     >  1:1604259/1‑289 (MQ=255)
                                                                      taataaGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAgctgc                                                                                                                                                                                                        >  2:1456119/1‑289 (MQ=255)
                                                                      taataaGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAgct                                                                                                                                                                                                          >  1:330056/1‑287 (MQ=255)
                                                                        ataaGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCATAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCACGGTCAATGGTCGATTTCGGGTGGCGGCGTGGAGCCTGGCGTACGAATGGAATAGGCAATACGCCGCGAAATTAGCGACGAACTGGGAGAACATCGGCtt                                                                                                                                                                                                      >  2:1891629/1‑289 (MQ=255)
                                                                                  ttATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGaaa                                                                                                                                                                                            >  2:637096/1‑289 (MQ=255)
                                                                                    atcatcGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGa                                                                                                                                                                                                                                                       <  1:476119/228‑1 (MQ=255)
                                                                                    atcatcGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATc                                                                                                                                                                                          >  2:1935167/1‑289 (MQ=255)
                                                                                    atcatcGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGCCGGCGTGGAGCCTGGCGCACGATTTGAAGAGGCACTCCGCTGCGAAATTCGCGAAGAACTGGGAGAACAACTGCTTCTGACCGAAATc                                                                                                                                                                                          >  2:1754249/1‑289 (MQ=255)
                                                                                       atcGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGcgaa                                                                                                                                                                                                                                                               >  1:1277901/1‑217 (MQ=255)
                                                                                       atcGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCCAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGACGGACGGGGAGAACAGCTGCTGTTgcacgcagtcac                                                                                                                                                                                        >  2:1848818/1‑277 (MQ=255)
                                                                                          gCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAg                                                                                                                                                                                                            >  1:38516/1‑265 (MQ=255)
                                                                                          gCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAg                                                                                                                                                                                                            <  2:38516/265‑1 (MQ=255)
                                                                                                   aTTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGGGAAATTCGCgaaga                                                                                                                                                                                                                         <  1:1500872/243‑1 (MQ=255)
                                                                                                   aTTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGGGAAATTCGCgaaga                                                                                                                                                                                                                         >  2:1500872/1‑243 (MQ=255)
                                                                                                   aTTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGACCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAAAAGCGGCTTTTGACAGAAATCAGGCCGTGGACATTc                                                                                                                                                                           >  2:1184205/1‑289 (MQ=255)
                                                                                                    ttACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATTGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCtt                                                                                                                                                                            <  2:1111939/287‑1 (MQ=255)
                                                                                                      aCTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGc                                                                                                                                                                        >  1:1252730/1‑289 (MQ=255)
                                                                                                         gTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCgat                                                                                                                                                                     <  1:218981/289‑1 (MQ=255)
                                                                                                            aCTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCgatgat                                                                                                                                                                  >  2:778214/1‑289 (MQ=255)
                                                                                                                      atTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAAt                                                                                                                                                                                           >  2:545136/1‑254 (MQ=255)
                                                                                                                      atTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAAt                                                                                                                                                                                           <  1:545136/254‑1 (MQ=255)
                                                                                                                        ttGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTTACAGAAATCACGCCGGGGACCTTCGGCGATGATCTTCGCACCAAg                                                                                                                                                      >  2:1123786/1‑289 (MQ=255)
                                                                                                                        ttGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAg                                                                                                                                                      <  2:330056/289‑1 (MQ=255)
                                                                                                                          gtgAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGAc                                                                                                                                                    <  1:637096/289‑1 (MQ=255)
                                                                                                                                          tcATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATAtt                                                                                                                                                               <  1:600089/262‑1 (MQ=255)
                                                                                                                                          tcATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATAtt                                                                                                                                                               >  2:600089/1‑262 (MQ=255)
                                                                                                                                          tcATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGGTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATGCGCGAAGAACTTGGAAAACAGATGCTTTTGAAAGAAATCACGCCGTGGACCTTCAGCCATGAACTTATCAACATAACGTATGCACATGGACg                                                                                                                                     >  2:740291/1‑288 (MQ=255)
                                                                                                                                            aTGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCaa                                                                                                                                  >  1:1108549/1‑289 (MQ=255)
                                                                                                                                                tttCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACGAAGACGTATGCAGATGGTCGCAAGGaa                                                                                                                              <  1:742665/289‑1 (MQ=255)
                                                                                                                                                 ttCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGaa                                                                                                                              <  1:1456119/288‑1 (MQ=255)
                                                                                                                                                  tCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAg                                                                                                                                                      >  1:976672/1‑263 (MQ=255)
                                                                                                                                                    tttttATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCgat                                                                                                                                                                     <  1:155284/246‑1 (MQ=255)
                                                                                                                                                              taAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATAGGAt                                                                                                                >  1:914948/1‑289 (MQ=255)
                                                                                                                                                                  gAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTta                                                                                                                      >  1:841134/1‑279 (MQ=255)
                                                                                                                                                                  gAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTta                                                                                                                      <  2:841134/279‑1 (MQ=255)
                                                                                                                                                                    atatCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTAcc                                                                                                           <  1:905553/288‑1 (MQ=255)
                                                                                                                                                                           tgtgCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGAttttt                                                                                                   >  1:452861/1‑289 (MQ=255)
                                                                                                                                                                            gtgCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGAc                                                                                                                                                                                                 <  1:1659165/194‑1 (MQ=255)
                                                                                                                                                                            gtgCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGAc                                                                                                                                                                                                 >  2:1659165/1‑194 (MQ=255)
                                                                                                                                                                             tgCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCa                                                                                                                                   <  1:814735/255‑1 (MQ=255)
                                                                                                                                                                             tgCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTg                                                                                                  >  2:446762/1‑288 (MQ=255)
                                                                                                                                                                             tgCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTg                                                                                                  >  2:1961560/1‑288 (MQ=255)
                                                                                                                                                                             tgCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTg                                                                                                  >  1:1961589/1‑288 (MQ=255)
                                                                                                                                                                                  cAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATc                                                                                                                                                                                          <  2:1777335/195‑1 (MQ=255)
                                                                                                                                                                                  cAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCg                                                                                            <  1:523812/289‑1 (MQ=255)
                                                                                                                                                                                       gACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGtt                                                                                          >  2:1607318/1‑286 (MQ=255)
                                                                                                                                                                                            ttGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTCTCTTATTTTTGACTGCGTTTCTGGCaa                                                                                  >  2:1591846/1‑289 (MQ=255)
                                                                                                                                                                                                 tGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATgg                                                                                                                                        >  2:1642764/1‑230 (MQ=255)
                                                                                                                                                                                                 tGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATgg                                                                                                                                        <  1:1642764/230‑1 (MQ=255)
                                                                                                                                                                                                 tGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCgag                                                                             >  1:273535/1‑289 (MQ=255)
                                                                                                                                                                                                  gCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCCAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCgcga                                                                            >  1:1928767/1‑289 (MQ=255)
                                                                                                                                                                                                  gCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGaa                                                                                                                              >  1:111283/1‑239 (MQ=255)
                                                                                                                                                                                                    ccTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGAGGGGCGCAAGGAAAAGCTTGATATGATTTACCTGATTTTTGACTGCGTTTCTGTCAACCGAGCAg                                                                          >  2:914224/1‑289 (MQ=255)
                                                                                                                                                                                                    ccTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGAACTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGACGAGATCTATATGAGTAACCTGATTTTTGCCTGCGTTTCTGCCAACCGAGAAg                                                                          >  2:1424275/1‑289 (MQ=255)
                                                                                                                                                                                                    ccTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCAGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTAAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGCCCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGCAGAGACTTATTTGACTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAAAAg                                                                          >  2:1355272/1‑289 (MQ=255)
                                                                                                                                                                                                      tttGATTCAAAATGATGGTGCTTTTTTGTTGTGTAAAATGGCCGACGATCGCGGCATTTTCCCCGGTCAATGGTCGATTTAGGGTGGCGGCGTGGAGCCTGGCGAACGTATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGACGTGGACCTTCAGCGATGATATTCGAACCACGACGTATGCAGATGGTCGCACGGAAGTGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTg                                                                        >  1:1433914/1‑289 (MQ=255)
                                                                                                                                                                                                      tttGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGaa                                                                                                                              <  1:1791203/235‑1 (MQ=255)
                                                                                                                                                                                                      tttGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGAt                                                                                                                         >  2:225916/1‑240 (MQ=255)
                                                                                                                                                                                                      tttGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTg                                                                        >  1:1529252/1‑289 (MQ=255)
                                                                                                                                                                                                      tttGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTg                                                                        >  2:338781/1‑289 (MQ=255)
                                                                                                                                                                                                      tttGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTg                                                                        >  1:484517/1‑289 (MQ=255)
                                                                                                                                                                                                       ttGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAg                                                                                                                                                      <  1:1694181/210‑1 (MQ=255)
                                                                                                                                                                                                       ttGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAg                                                                                                                                                      >  2:1694181/1‑210 (MQ=255)
                                                                                                                                                                                                       ttGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGa                                                                       >  1:1144787/1‑289 (MQ=255)
                                                                                                                                                                                                       ttGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGa                                                                       >  2:1382630/1‑289 (MQ=255)
                                                                                                                                                                                                       ttGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATGTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGa                                                                       >  1:68356/1‑289 (MQ=255)
                                                                                                                                                                                                        tGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGaa                                                                      >  1:1589385/1‑289 (MQ=255)
                                                                                                                                                                                                        tGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGaa                                                                      >  1:1879163/1‑289 (MQ=255)
                                                                                                                                                                                                           ttCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAAt                                                                   >  1:337118/1‑289 (MQ=255)
                                                                                                                                                                                                           ttCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAAt                                                                   >  1:1795761/1‑289 (MQ=255)
                                                                                                                                                                                                                   gatgGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAag                                                           <  1:367745/289‑1 (MQ=255)
                                                                                                                                                                                                                   gatgGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAag                                                           <  1:1754249/289‑1 (MQ=255)
                                                                                                                                                                                                                     tgGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAagag                                                         >  1:1736782/1‑289 (MQ=255)
                                                                                                                                                                                                                     tgGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGATGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCTCCAAGACGAATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAagag                                                         >  2:1583893/1‑289 (MQ=255)
                                                                                                                                                                                                                         gCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTc                                                     <  1:182322/289‑1 (MQ=255)
                                                                                                                                                                                                                          cTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCCAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGTGAAGGGAAAATAAACGAAGAGtttac                                                    >  2:1153774/1‑287 (MQ=255)
                                                                                                                                                                                                                          cTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGCAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGATACGTGAAAATAAACGAAGCGttcta                                                    >  2:1720327/1‑286 (MQ=255)
                                                                                                                                                                                                                                  cTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCgaa                                                                                                                                                                                                                           >  1:495569/1‑114 (MQ=255)
                                                                                                                                                                                                                                  cTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCgaa                                                                                                                                                                                                                           <  2:495569/114‑1 (MQ=255)
                                                                                                                                                                                                                                  cTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTAc                                             >  2:1272329/1‑288 (MQ=255)
                                                                                                                                                                                                                                    gtgtAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCCAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATACAAGAAACGTTTCTGGACTAcgcg                                          >  2:125864/1‑289 (MQ=255)
                                                                                                                                                                                                                                    gtgtAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGAGTTACCTGATTTTTGACTGCTGTTCTGCCAACCGCGAAGTGAAAATAAAAGAAAAGTTTCTGGACTAcgtg                                          >  2:154948/1‑287 (MQ=255)
                                                                                                                                                                                                                                       tAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTc                                                     <  1:1007627/275‑1 (MQ=255)
                                                                                                                                                                                                                                            tGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAATCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTaaa                                  >  2:1279892/1‑289 (MQ=255)
                                                                                                                                                                                                                                             tcgcgaatttCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTaaa                                  >  1:57464/10‑288 (MQ=255)
                                                                                                                                                                                                                                               ccGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAag                                                           <  1:437746/261‑1 (MQ=255)
                                                                                                                                                                                                                                               ccGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTaaaa                                 >  1:1238474/1‑287 (MQ=255)
                                                                                                                                                                                                                                                            cgTTTGCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGt                   <  2:1795761/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                ttCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGCAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCAGTGGACCTTCCGCGATGATATTCGCACCATGACGTATGCAGATGGTCGCCAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGTCAACCGAGAAGTGAACATAAACGAAGAGTTTCAGGACTACGCGTCGGTAAAACCTGAAGAGCTGGTGCAtt              >  2:1953770/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                ttCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCAtt              >  1:707403/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                 tCCCCGGTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTa             <  2:214508/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      ggTCAATGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTCTCTGCCAACCGAGAAGGGTAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGAACTGGTGCATTATGAtt        >  1:21114/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            tGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATg  >  2:585715/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            tGGGCGATTTCGGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATg  >  1:139775/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                     
TAACTAAATACTTCTTAAATAATTAAATGCCGAAAAAATAAACACACTTTATCGATACACACAAAAATAATAATAAGTACAGTTATCATCGCAAAAGAGATTACTGTCACTTTCACATATTTGTGAGTTACCGTATTCTCATGGTTTCTTTTTATTTATAAGGAATATCCCTGTGCGACAACGGACTATTGTATGCCCTTTGATTCAAAATGATGGTGCTTATTTGCTGTGTAAAATGGCCGACGATCGCGGCGTTTTCCCCGGTCAATGGGCGATTAGCGGTGGCGGCGTGGAGCCTGGCGAACGAATTGAAGAGGCACTACGCCGCGAAATTCGCGAAGAACTGGGAGAACAGCTGCTTTTGACAGAAATCACGCCGTGGACCTTCAGCGATGATATTCGCACCAAGACGTATGCAGATGGTCGCAAGGAAGAGATTTATATGATTTACCTGATTTTTGACTGCGTTTCTGCCAACCGAGAAGTGAAAATAAACGAAGAGTTTCAGGACTACGCGTGGGTAAAACCTGAAGATCTGGTGCATTATGATTTGAATG  >  CP042583/1935641‑1936197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A