Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,967,867 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,967,8670GC99.0% 721.8 / NA 309intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  major base C (157/148);  minor base A (2/1);  total (160/149)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,967,8680CG99.4% 729.4 / NA 309intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  major base G (158/148);  minor base T (1/1);  total (160/149)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,967,8690TA99.4% 731.2 / NA 309intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (160/147);  minor base C (0/2);  total (160/149)
Fisher's exact test for biased strand distribution p-value = 2.32e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 309 total aligned reads displayed.

ACGATACGACCACGATAACGGGGCGGCAGATAGACCGGCTCTTCCGGGTACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAAGCTCGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTTCCTGCTCGGCTTCCGGCTGGTCAAACGGGTGACGGTGACATACCGCCACGCCCGCGATGGCAAAGGTAATAAA  >  CP042583/1967593‑1968145
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                    
    tACGACCACGATAACGGGGCGGCAGATAGACCGGCTCTTCCGGGTACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGTCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCCTTAACGACGCAATAATCAAAAtc                                                                                                                                                                                                                                                                      >  1:1196919/1‑288 (MQ=255)
    tACGACCACGATAACGGGGCGGCAGATAGACCGGCTCTTCCGGGTACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATg                                                                                                                                                                                                                                                                      <  1:541532/289‑1 (MQ=255)
    tACGACCACGATAACGGGGCGGCAGATAGACCGGCCCCTCCGGGTACATTCGCGTTCCGCGTTTGGCGCACGCCTGCAGGCCGCTCATCCAGATACTCCGAACCTGGGTGCCGAAACCTACTAACACTTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTCCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCTCCTTGATCAGCGTCAGGGGAAGGCCGATGTTCCAGCCAAATGACATTACCTGGTTCAAACGCGGACGCCGTACGCAAGCACGAAACAAAATg                                                                                                                                                                                                                                                                      >  2:1507005/1‑289 (MQ=255)
      caaCCACGATAACGGGGCGGCGGATGGACCGGCTCTTCCGGGTACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGaa                                                                                                                                                                                                                                                                    <  2:709924/287‑1 (MQ=255)
         ccACGATAACGGGGCGGCAGATAGACCGGCTCTTCCGGGTACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAAAGAAACTAAAca                                                                                                                                                                                                                                                                  >  2:2187847/1‑288 (MQ=255)
              aTAACGGGGCGGCAGATAGACCGGCTCTTCCGGGTACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATg                                                                                                                                                                                                                                                                      >  2:1413080/1‑279 (MQ=255)
                     ggcggcAGATAGACCGGCTCTTCCGGGTACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGCCTTATTGCCCCTTATTTCGCCTGCCAGAGAAGGACAGCCGCCGTTACCAGCAAGTTCATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGACGGACATTACCTGGTCACAACGCGGACCACGTAACTACGTACTCACCAAAATGAAcacaataacaaaaaa                                                                                                                                                                                                                                                     >  2:723799/1‑276 (MQ=255)
                       cggcAGATAGACCGGCTCTTCCGGGTACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAAc                                                                                                                                                                                                                                                    >  2:95311/1‑288 (MQ=255)
                       cggcAGATAGACCGGCTCTTCCGGGTACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACCAATCAAAATGAACATCCACATAAAAAAc                                                                                                                                                                                                                                                    >  2:1855765/1‑288 (MQ=255)
                                 aCCGGCTCTTCCGGGTACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGGCGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCa                                                                                                                                                                                                                                          >  2:1577162/1‑288 (MQ=255)
                                   cGGCTCTTCCGGGTACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAgcg                                                                                                                                                                                                                                       <  1:1901586/289‑1 (MQ=255)
                                   cGGCTCTTCCGGGTACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAgcg                                                                                                                                                                                                                                       <  1:1411270/289‑1 (MQ=255)
                                   cGGCTCTTCCGGGTACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAgcg                                                                                                                                                                                                                                       <  2:280804/289‑1 (MQ=255)
                                   cGGCTCGTCCGGGTACATTCGCGGTTCGCGTTGTGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAgcg                                                                                                                                                                                                                                       <  2:937292/289‑1 (MQ=255)
                                      ctctTCCGGGTACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGCAGCAAAACGAACATCATCATAAAAAACGCGGTTGTCAgcgcta                                                                                                                                                                                                                                    >  2:1404903/1‑287 (MQ=255)
                                      ctctTCCGGGTACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGAGGTTTTCGGCGCGa                                                                                                                                                                                                                                    >  1:170344/1‑289 (MQ=255)
                                                tACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAATGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGa                                                                                                                                                                                                                           <  1:1523586/288‑1 (MQ=255)
                                                tACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATAATCACAAAGAACGCGGTTTTCACAGCGAACCCgaagaa                                                                                                                                                                                                                          >  2:661564/1‑289 (MQ=255)
                                                 tcATTCGCGTTTCGGGTTGGCCGAAAGCGTGCATGCCGATCATCCAAATACTACGAACTTCGGTGACGAAACATACTAACAATTCTTTTAAGGTCATGGTCTTATTGACCCTTATTGCGCCGTCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGCTTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGAAGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAAt                                                                                                                                                                                                                         <  2:2172143/288‑1 (MQ=255)
                                                   aTTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCCGATGAATg                                                                                                                                                                                                                        >  1:1885963/1‑288 (MQ=255)
                                                       gcgtttcgcgtttGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGt                                                                                                                                                                                                                   <  1:1997459/289‑1 (MQ=255)
                                                       gcgtgtcgcgtttGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGt                                                                                                                                                                                                                   <  1:1893185/289‑1 (MQ=255)
                                                            tccgggttgcggAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCGACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTaacaa                                                                                                                                                                                                              <  2:1967411/278‑1 (MQ=255)
                                                                          cgcgTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTgccagc                                                                                                                                                                                                <  1:1478011/289‑1 (MQ=255)
                                                                          cgcgTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTgccagc                                                                                                                                                                                                <  1:243238/289‑1 (MQ=255)
                                                                            gctgaggcccGATCATCCAGATACTACGAACCTGGTTTCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCGGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTgccagcca                                                                                                                                                                                              <  2:170344/281‑1 (MQ=255)
                                                                            cgTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTgccagcc                                                                                                                                                                                               >  2:1884661/1‑288 (MQ=255)
                                                                              tGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCGTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGCCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAAAATCATCATAAAGAACGCGGTTCTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTgccagcccc                                                                                                                                                                                             >  1:15847/1‑286 (MQ=255)
                                                                               gCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCAcc                                                                                                                                                                                            <  2:1283440/288‑1 (MQ=255)
                                                                                      gATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACa                                                                                                                                                                                    <  1:77360/289‑1 (MQ=255)
                                                                                       atcatcCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGATCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACa                                                                                                                                                                                    >  1:15687/1‑288 (MQ=255)
                                                                                           tcCAGATACTACGCACCTGGGTGCCGAAGCCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTc                                                                                                                                                                               <  1:2025997/289‑1 (MQ=255)
                                                                                           tcCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTc                                                                                                                                                                               <  1:661564/289‑1 (MQ=255)
                                                                                                 tactacGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCAt                                                                                                                                                                          <  1:464530/288‑1 (MQ=255)
                                                                                                 tactacGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCAt                                                                                                                                                                          <  1:1767810/288‑1 (MQ=255)
                                                                                                 tactacGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCAt                                                                                                                                                                          <  1:1263099/288‑1 (MQ=255)
                                                                                                 tactacGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATc                                                                                                                                                                         >  2:301041/1‑289 (MQ=255)
                                                                                                  actacGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCAt                                                                                                                                                                          >  1:739524/1‑287 (MQ=255)
                                                                                                  actacGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCAt                                                                                                                                                                          <  2:739524/287‑1 (MQ=255)
                                                                                                      cGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAAca                                                                                                                                                                                                                                                                  >  2:1053567/1‑195 (MQ=255)
                                                                                                      cGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAAca                                                                                                                                                                                                                                                                  <  1:1053567/195‑1 (MQ=255)
                                                                                                      cGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATTGCGGTAACAACGGGTCTTGCCAGCCACCGAAGGCCAACGTCAcccataacgc                                                                                                                                                                    >  2:176295/1‑281 (MQ=255)
                                                                                                      cGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGc                                                                                                                                                                    >  1:1013686/1‑289 (MQ=255)
                                                                                                      cGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCCGTAACAACGGGCCTTGCCAGCCAACGAACAACAGAGACACCAACAATGc                                                                                                                                                                    >  2:229792/1‑289 (MQ=255)
                                                                                                         aCCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCaga                                                                                                                                                                 >  1:2230219/1‑289 (MQ=255)
                                                                                                          ccTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCagag                                                                                                                                                                >  1:696048/1‑289 (MQ=255)
                                                                                                              ggTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTTCCAGCCACCGAAGAACAGCTTCACCATCAATGCAGAGATgg                                                                                                                                                            >  1:1962349/1‑289 (MQ=255)
                                                                                                              ggTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATgg                                                                                                                                                            >  2:1312392/1‑289 (MQ=255)
                                                                                                              ggTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATgg                                                                                                                                                            >  2:1892760/1‑289 (MQ=255)
                                                                                                                 gCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTca                                                                                                                                                         <  1:397528/289‑1 (MQ=255)
                                                                                                                 gCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTca                                                                                                                                                         <  1:1333835/289‑1 (MQ=255)
                                                                                                                  ccGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAAAGGGCCGTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCACAGATGGTccc                                                                                                                                                        >  2:591644/1‑287 (MQ=255)
                                                                                                                   cGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCCGCGGCAGGCAGATCTTCCAGCCGAAGCACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAATATCACCATAAAGAACGCGGTTTTCATCGCGAACCAGATGAATTGCGGTAACAACGGCCCTTGCCATCCACACATGCACCGCGTCCCCCTCAATCCAAAGATGCTctga                                                                                                                                                       >  2:1590548/1‑286 (MQ=255)
                                                                                                                    gAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACaa                                                                                                                                                      <  1:301041/289‑1 (MQ=255)
                                                                                                                            ctaACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGCTGGTCACAATCCCGATg                                                                                                                                              >  1:1924559/1‑289 (MQ=255)
                                                                                                                              aaCAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTa                                                                                                                                            <  1:1605873/289‑1 (MQ=255)
                                                                                                                                      ttttAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCCAAGCACAGCCTCACCATCCATCCAGACACCGTCCCAACCCCCAtctcccccccc                                                                                                                                     >  2:1814731/1‑278 (MQ=255)
                                                                                                                                        ttAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACGGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACg                                                                                                                                  <  1:251057/289‑1 (MQ=255)
                                                                                                                                        ttAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACg                                                                                                                                  <  2:2089395/289‑1 (MQ=255)
                                                                                                                                           aGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCg                                                                                                                                                                                           >  2:753004/1‑229 (MQ=255)
                                                                                                                                           aGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACgaag                                                                                                                               >  1:1039169/1‑289 (MQ=255)
                                                                                                                                                aTGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAg                                                                                                                          >  2:391616/1‑289 (MQ=255)
                                                                                                                                                aTGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCGTGCCAGCCACCGAAGAACAGCGTCACCATCCATGCAGAGATGGTCACAATCCCGATGTACTCACACAAgaagaaaca                                                                                                                          >  2:909491/1‑286 (MQ=255)
                                                                                                                                                aTGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGACAGATTTTCCAGCCGAAGGACATTACCTTGTCATAACACGACCGCGGTAACGACGCACGAAGCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGACTGGCGGTAACAACGGGCCGTGCCAGCCACCGAAGAAAAGCGTCACCCTCAATGCAGAGATGGTCACAATCCCCATGTACTCACCCACGAacaacac                                                                                                                          >  2:1737635/1‑288 (MQ=255)
                                                                                                                                                       tATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGa                                                                                                                     >  1:1713444/1‑287 (MQ=255)
                                                                                                                                                        aTTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACCCACCCACGAAGAACAGACCGAACt                                                                                                                  >  1:1116131/1‑289 (MQ=255)
                                                                                                                                                            ccccTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAAAAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCAACATCAATGCAGAGCTGGTCACAATCCCGAAGTACCCACCCCCCAAAAACAGACCGAAATTcca                                                                                                              >  2:1795392/1‑287 (MQ=255)
                                                                                                                                                             cccTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCAt                                                                                                                                                                          >  2:42250/1‑228 (MQ=255)
                                                                                                                                                             cccTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCAt                                                                                                                                                                          <  1:42250/228‑1 (MQ=255)
                                                                                                                                                             cccTTATTGCGCCGGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATa                                                                                                             <  2:1713444/289‑1 (MQ=255)
                                                                                                                                                             cccTTATGGCGCCGGCAAGAGAATGACGGCCGCCGTTACCAGCAAGTTGATCGGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATa                                                                                                             <  2:1624064/289‑1 (MQ=255)
                                                                                                                                                              ccTTATTGCGCCTGCCAGAGACTGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGACTGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGCACAGCGTCACCAACAATGCAGAGATGGCCCCAATCCCGATGTACCCACCCACGCAGAACAGACACAACTTCacc                                                                                                             >  2:2062864/1‑286 (MQ=255)
                                                                                                                                                              ccTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTaacaa                                                                                                                                                                                                              >  2:533463/1‑191 (MQ=255)
                                                                                                                                                                 tATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCgg                                                                                                         >  1:1138964/1‑289 (MQ=255)
                                                                                                                                                                  aTTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTa                                                                                                                                            <  1:2099668/253‑1 (MQ=255)
                                                                                                                                                                        ccTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGcc                                                                                                                                                                                                        >  2:1343240/1‑187 (MQ=255)
                                                                                                                                                                        ccTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTc                                                                                                  >  1:1375488/1‑289 (MQ=255)
                                                                                                                                                                           gCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACaa                                                                                                                                                      >  1:975449/1‑234 (MQ=255)
                                                                                                                                                                           gCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAAt                                                                                               >  1:1219275/1‑289 (MQ=255)
                                                                                                                                                                            ccAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCAc                                                                                                                                       <  2:1131322/248‑1 (MQ=255)
                                                                                                                                                                                 gaATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGt                                                                                          <  1:909491/288‑1 (MQ=255)
                                                                                                                                                                                 gaATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGt                                                                                          <  2:2230219/288‑1 (MQ=255)
                                                                                                                                                                                     gACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCAt                                                                                                                                                                          >  1:1751126/1‑204 (MQ=255)
                                                                                                                                                                                                    cacaggattcgtcagcgtcagcgGCAGCAAGGATTTCCAGCCAAAGGACCTTACCTGGGAATAACGCGGACGCTGTAACTCCGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTGCAGCGCGAACCAGATGTATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGCCCGAACTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTTCCTGc                                                                      <  2:479409/278‑1 (MQ=255)
                                                                                                                                                                                                        aaGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCa                                                                                                                                                                   >  2:1026158/1‑192 (MQ=255)
                                                                                                                                                                                                        aaGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTTCCTGCt                                                                     <  2:1258703/286‑1 (MQ=255)
                                                                                                                                                                                                          gTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTTCCTGCTCGGCt                                                                >  1:1417653/1‑289 (MQ=255)
                                                                                                                                                                                                           ttGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTTCCTGCTCGGCt                                                                >  1:315632/1‑288 (MQ=255)
                                                                                                                                                                                                           ttGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTTCCTGCTCGGCt                                                                >  2:1152024/1‑288 (MQ=255)
                                                                                                                                                                                                                              ggcagATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCATTGCTAGCCACCGAAAAACAGCGTCACCATCAATGCAGAGCTGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGACCTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTGCCTGCCCGGCTTCCGGCTGGTCAAACGggtg                                            >  1:1679025/1‑289 (MQ=255)
                                                                                                                                                                                                                                 agATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTTCCTGCTCGGCTTCCGGCTGGTCAAACGggtga                                           <  1:218719/287‑1 (MQ=255)
                                                                                                                                                                                                                                               aaGGACATTACCTGGTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTTCCTGCTCGGCTTCCGGCTGGTCAAACGGGTGACGGTGACATACCGcc                            >  1:779676/1‑288 (MQ=255)
                                                                                                                                                                                                                                                            ggTCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTTCCTGCt                                                                     <  1:1299013/234‑1 (MQ=255)
                                                                                                                                                                                                                                                              tCATAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTTCCTGCTCGGCTTCCGGCTGGTCAAACGGGTGACGGTGACATACCGCCACGCCCGCGATGGCa             <  2:779676/288‑1 (MQ=255)
                                                                                                                                                                                                                                                               cATAACGCGGACGCGGTAACGACGCACGAATCAACATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTTCCTGCTCGGCTTCCGGCTGGTCAAACGGGTGACGGTGACATACCGCCACGCCCGCGATGGCaaa           <  1:508716/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                aTAACGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTTCCTGCTCGGCTTCCGGCTGGTCAAACGGGTGACGGTGACATACCGCCACGCCCGCGATGGCAAAg          <  1:1855765/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  aaCGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTTCCTGCTCGGCTTCCGGCTGGTCAAACGGGTGACGGTGACATACCGCCACGCCCGCGCTGGCAAAGGt        >  1:187036/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                  aaCGCGGACGCGGTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTTCCTGCTCGGCTTCCGGCTGGTCAAACGGGTGACGGTGACATACCGCCACGCCCGCGATGGCAAAGGt        >  2:109315/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                     gcggacgcggTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTTCCTGCTCGGCTTCCGGCTGGTCAAACGGGTGACGGTGACATACCGCCACGCCCGCGATGGCAAAGGtaat     <  1:109315/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                        gacgcggTAACGACGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTTCCTGCTCGGCTTCCGGCTGGTCAAACGGGTGACGGTGACATACCGCCACGCCCGCGATGGCAAAGGTAATaaa  >  2:189674/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                    
ACGATACGACCACGATAACGGGGCGGCAGATAGACCGGCTCTTCCGGGTACATTCGCGTTTCGCGTTTGGCGAACGCGTGCAGGCCGATCATCCAGATACTACGAACCTGGGTGCCGAAACCTACTAACAATTCTTTTAAGGTCATGGTCTTATTGCCCCTTATTGCGCCTGCCAGAGAATGACAGCCGCCGTTACCAGCAAGTTGATCAGCGTCAGCGGCAGGCAGATTTTCCAGCCGAAGGACATTACCTGGTCATAACGCGGACGCGGTAAGCTCGCACGAATCAAAATGAACATCATCATAAAGAACGCGGTTTTCAGCGCGAACCAGATGAATGGCGGTAACAACGGGCCTTGCCAGCCACCGAAGAACAGCGTCACCATCAATGCAGAGATGGTCACAATCCCGATGTACTCACCCACGAAGAACAGACCGAACTTCATACCGGAATATTCAATGTGGTAACCATCCGCCAGTTCCTGCTCGGCTTCCGGCTGGTCAAACGGGTGACGGTGACATACCGCCACGCCCGCGATGGCAAAGGTAATAAA  >  CP042583/1967593‑1968145

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A